RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 GAS2L2Q8NHY3 880 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 SPZ1Q9BXG8 430 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 RTFDC1Q9BY42 306 aaPredicted RBP5.75□□□□□ -1.49
UBE4A-203ENST00000545354 DDX21Q9NR30 783 aaKnown RBP eCLIP5.75□□□□□ -1.49
UBE4A-203ENST00000545354 PDRG1Q9NUG6 133 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 PGAP2Q9UHJ9 254 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 ATPIF1Q9UII2 106 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 TBX22Q9Y458 520 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 TRIM17Q9Y577 477 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 SPO11Q9Y5K1 396 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 GRIN2AQ12879 1464 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 MIA2Q96PC5 1412 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 MAPKBP1O60336 1514 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 SHROOM2Q13796 1616 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 A6NNZ2 444 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 BIRC5O15392 142 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 PARP1P09874 1014 aaKnown RBP5.75□□□□□ -1.49
UBE4A-203ENST00000545354 ALOX15P16050 662 aaPredicted RBP5.75□□□□□ -1.49
UBE4A-203ENST00000545354 KCNA6P17658 529 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 CSTF2P33240 577 aaKnown RBP eCLIP5.75□□□□□ -1.49
UBE4A-203ENST00000545354 EPS15P42566 896 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 CTCFP49711 727 aaPredicted RBP5.75□□□□□ -1.49
UBE4A-203ENST00000545354 GJA9P57773 515 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 AP2B1P63010 937 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 PDE3BQ13370 1112 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 SNX1Q13596 522 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 ACAP1Q15027 740 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 TUBB8Q3ZCM7 444 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 CEP85LQ5SZL2 805 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 NUTM2DQ5VT03 806 aaPredicted RBP5.75□□□□□ -1.49
UBE4A-203ENST00000545354 TMC6Q7Z403 805 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 PPFIBP1Q86W92 1011 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 LRRC43Q8N309 656 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 GALNT6Q8NCL4 622 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 DIS3LQ8TF46 1054 aaKnown RBP5.75□□□□□ -1.49
UBE4A-203ENST00000545354 CEP95Q96GE4 821 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 SNF8Q96H20 258 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 TMEM87BQ96K49 555 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 MOGAT1Q96PD6 335 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 UPF3BQ9BZI7 483 aaKnown RBP5.75□□□□□ -1.49
UBE4A-203ENST00000545354 CYP4F11Q9HBI6 524 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 PCDH12Q9NPG4 1184 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 PAPOLBQ9NRJ5 636 aaKnown RBP5.75□□□□□ -1.49
UBE4A-203ENST00000545354 CORO1CQ9ULV4 474 aaPredicted RBP5.75□□□□□ -1.49
UBE4A-203ENST00000545354 GJA3Q9Y6H8 435 aa5.75□□□□□ -1.49
UBE4A-203ENST00000545354 PTPRCP08575 1304 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 CUX1P39880 1505 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 E9PMD0 336 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 SOCS7O14512 581 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 SPTLC2O15270 562 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 ZEB2O60315 1214 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 TADA3O75528 432 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 LUC7L3O95232 432 aaKnown RBP5.74□□□□□ -1.49
UBE4A-203ENST00000545354 ZNF76P36508 570 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 SPECC1Q5M775 1068 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 ALKBH2Q6NS38 261 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 DSTYKQ6XUX3 929 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 BPHLQ86WA6 291 aaPredicted RBP5.74□□□□□ -1.49
UBE4A-203ENST00000545354 LSMEM2Q8N112 164 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 GALNT15Q8N3T1 639 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 FLCNQ8NFG4 579 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 NEK11Q8NG66 645 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 GTF3C6Q969F1 213 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 ZNF653Q96CK0 615 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 ASIC4Q96FT7 647 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 CLMNQ96JQ2 1002 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 NLRP3Q96P20 1036 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 HERC2P3Q9BVR0 1158 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 CYLDQ9NQC7 956 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 DDX56Q9NY93 547 aaKnown RBP5.74□□□□□ -1.49
UBE4A-203ENST00000545354 PCDHGB3Q9Y5G1 929 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 PPP2R3BQ9Y5P8 575 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 PBRM1Q86U86 1689 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 GRXCR2A6NFK2 248 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 LRRC10BA6NIK2 292 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 DPYSL4O14531 572 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 ARHGAP33O14559 1287 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 NDC80O14777 642 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 WDR46O15213 610 aaKnown RBP5.74□□□□□ -1.49
UBE4A-203ENST00000545354 MBD4O95243 580 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 VAMP1P23763 118 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 MAGEA10P43363 369 aaPredicted RBP5.74□□□□□ -1.49
UBE4A-203ENST00000545354 MXI1P50539 228 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 CLCN2P51788 898 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 IFFO1Q0D2I5 559 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 DPYSQ14117 519 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 NAA25Q14CX7 972 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 PLCB4Q15147 1175 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 C8orf34Q49A92 452 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 SMUG1Q53HV7 270 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 CFAP157Q5JU67 520 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 TSHZ3Q63HK5 1081 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 LMBRD2Q68DH5 695 aaPredicted RBP5.74□□□□□ -1.49
UBE4A-203ENST00000545354 FCRLBQ6BAA4 426 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 KANK3Q6NY19 840 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 ZNF449Q6P9G9 518 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 TMCO3Q6UWJ1 677 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 NCCRP1Q6ZVX7 275 aaPredicted RBP5.74□□□□□ -1.49
UBE4A-203ENST00000545354 DGLUCYQ7Z3D6 616 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 TRIML2Q8N7C3 387 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms