RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 KIF23Q02241 960 aaPredicted RBP13.18□□□□□ -0.3
TNC-213ENST00000544972 RRP1BQ14684 758 aaKnown RBP13.18□□□□□ -0.3
TNC-213ENST00000544972 GPT2Q8TD30 523 aa13.18□□□□□ -0.3
TNC-213ENST00000544972 TMEM39BQ9GZU3 492 aa13.18□□□□□ -0.3
TNC-213ENST00000544972 MYH4Q9Y623 1939 aa13.17□□□□□ -0.3
TNC-213ENST00000544972 hCG_1642624A0A1W2PR95 340 aa13.17□□□□□ -0.3
TNC-213ENST00000544972 MPHOSPH10O00566 681 aaKnown RBP13.17□□□□□ -0.3
TNC-213ENST00000544972 GADD45BO75293 160 aaPredicted RBP13.17□□□□□ -0.3
TNC-213ENST00000544972 TTLL1O95922 423 aa13.17□□□□□ -0.3
TNC-213ENST00000544972 JAG1P78504 1218 aa13.17□□□□□ -0.3
TNC-213ENST00000544972 KLHL40Q2TBA0 621 aa13.17□□□□□ -0.3
TNC-213ENST00000544972 RBM26Q5T8P6 1007 aaKnown RBP13.17□□□□□ -0.3
TNC-213ENST00000544972 TFIP11Q9UBB9 837 aaKnown RBP13.17□□□□□ -0.3
TNC-213ENST00000544972 CLIP2Q9UDT6 1046 aa13.17□□□□□ -0.3
TNC-213ENST00000544972 HERC5Q9UII4 1024 aaKnown RBP13.17□□□□□ -0.3
TNC-213ENST00000544972 MTMR7Q9Y216 660 aa13.17□□□□□ -0.3
TNC-213ENST00000544972 DDX49Q9Y6V7 483 aaKnown RBP13.17□□□□□ -0.3
TNC-213ENST00000544972 SIAH1Q8IUQ4 282 aa13.16□□□□□ -0.3
TNC-213ENST00000544972 LRRC47Q8N1G4 583 aaKnown RBP13.16□□□□□ -0.3
TNC-213ENST00000544972 TRIM34Q9BYJ4 488 aa13.16□□□□□ -0.3
TNC-213ENST00000544972 ASTN2O75129 1339 aaPredicted RBP13.16□□□□□ -0.3
TNC-213ENST00000544972 CYTH3O43739 400 aa13.16□□□□□ -0.3
TNC-213ENST00000544972 MMP1P03956 469 aa13.16□□□□□ -0.3
TNC-213ENST00000544972 GOLGA8HP0CJ92 632 aa13.16□□□□□ -0.3
TNC-213ENST00000544972 SNHG28P0DPA3 235 aa13.16□□□□□ -0.3
TNC-213ENST00000544972 PDHBP11177 359 aa13.16□□□□□ -0.3
TNC-213ENST00000544972 VEGFAP15692 232 aaPredicted RBP13.16□□□□□ -0.3
TNC-213ENST00000544972 U2AF2P26368 475 aaKnown RBP eCLIP13.16□□□□□ -0.3
TNC-213ENST00000544972 GNAQP50148 359 aa13.16□□□□□ -0.3
TNC-213ENST00000544972 AKAP17AQ02040 695 aaKnown RBP13.16□□□□□ -0.3
TNC-213ENST00000544972 TRIM29Q14134 588 aa13.16□□□□□ -0.3
TNC-213ENST00000544972 TBC1D10BQ4KMP7 808 aaPredicted RBP13.16□□□□□ -0.3
TNC-213ENST00000544972 USP17L2Q6R6M4 530 aa13.16□□□□□ -0.3
TNC-213ENST00000544972 GPC2Q8N158 579 aa13.16□□□□□ -0.3
TNC-213ENST00000544972 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.16□□□□□ -0.3
TNC-213ENST00000544972 KCNJ14Q9UNX9 436 aa13.16□□□□□ -0.3
TNC-213ENST00000544972 SCAF8Q9UPN6 1271 aaKnown RBP13.16□□□□□ -0.3
TNC-213ENST00000544972 ELP1O95163 1332 aa13.15□□□□□ -0.3
TNC-213ENST00000544972 USP17L5A8MUK1 530 aa13.15□□□□□ -0.3
TNC-213ENST00000544972 TBC1D12O60347 775 aa13.15□□□□□ -0.3
TNC-213ENST00000544972 GDF11O95390 407 aa13.15□□□□□ -0.3
TNC-213ENST00000544972 PARP1P09874 1014 aaKnown RBP13.15□□□□□ -0.3
TNC-213ENST00000544972 MAP3K10Q02779 954 aa13.15□□□□□ -0.3
TNC-213ENST00000544972 RASA3Q14644 834 aa13.15□□□□□ -0.3
TNC-213ENST00000544972 SEPT2Q15019 361 aa13.15□□□□□ -0.3
TNC-213ENST00000544972 ABCB5Q2M3G0 1257 aa13.15□□□□□ -0.3
TNC-213ENST00000544972 KIF4BQ2VIQ3 1234 aa13.15□□□□□ -0.3
TNC-213ENST00000544972 TMEM179Q6ZVK1 233 aa13.15□□□□□ -0.3
TNC-213ENST00000544972 BRAPQ7Z569 592 aa13.15□□□□□ -0.3
TNC-213ENST00000544972 LEO1Q8WVC0 666 aaPredicted RBP13.15□□□□□ -0.3
TNC-213ENST00000544972 MKL1Q969V6 931 aa13.15□□□□□ -0.3
TNC-213ENST00000544972 TEPSINQ96N21 525 aa13.15□□□□□ -0.3
TNC-213ENST00000544972 FTOQ9C0B1 505 aaKnown RBP eCLIP13.15□□□□□ -0.3
TNC-213ENST00000544972 SCAND2PQ9GZW5 306 aaPredicted RBP13.15□□□□□ -0.3
TNC-213ENST00000544972 KANSL2Q9H9L4 492 aa13.15□□□□□ -0.3
TNC-213ENST00000544972 GPRC5DQ9NZD1 345 aa13.15□□□□□ -0.3
TNC-213ENST00000544972 KLRF2D3W0D1 207 aa13.14□□□□□ -0.31
TNC-213ENST00000544972 EEF2P13639 858 aaKnown RBP13.14□□□□□ -0.31
TNC-213ENST00000544972 PFKFB3Q16875 520 aaPredicted RBP13.14□□□□□ -0.31
TNC-213ENST00000544972 ATL3Q6DD88 541 aa13.14□□□□□ -0.31
TNC-213ENST00000544972 USP28Q96RU2 1077 aa13.14□□□□□ -0.31
TNC-213ENST00000544972 LZTS2Q9BRK4 669 aa13.14□□□□□ -0.31
TNC-213ENST00000544972 CPVLQ9H3G5 476 aa13.14□□□□□ -0.31
TNC-213ENST00000544972 VPS54Q9P1Q0 977 aa13.14□□□□□ -0.31
TNC-213ENST00000544972 NYAP2Q9P242 653 aa13.14□□□□□ -0.31
TNC-213ENST00000544972 BTBD18B2RXH4 712 aa13.13□□□□□ -0.31
TNC-213ENST00000544972 GH2P01242 217 aa13.13□□□□□ -0.31
TNC-213ENST00000544972 SCG2P13521 617 aa13.13□□□□□ -0.31
TNC-213ENST00000544972 CSPP1Q1MSJ5 1256 aa13.13□□□□□ -0.31
TNC-213ENST00000544972 PPP4R3BQ5MIZ7 849 aa13.13□□□□□ -0.31
TNC-213ENST00000544972 MYSM1Q5VVJ2 828 aa13.13□□□□□ -0.31
TNC-213ENST00000544972 MIGA2Q7L4E1 593 aa13.13□□□□□ -0.31
TNC-213ENST00000544972 PHF20Q9BVI0 1012 aa13.13□□□□□ -0.31
TNC-213ENST00000544972 SPZ1Q9BXG8 430 aa13.13□□□□□ -0.31
TNC-213ENST00000544972 GZF1Q9H116 711 aaPredicted RBP13.13□□□□□ -0.31
TNC-213ENST00000544972 HACL1Q9UJ83 578 aa13.13□□□□□ -0.31
TNC-213ENST00000544972 CFAP45Q9UL16 551 aa13.13□□□□□ -0.31
TNC-213ENST00000544972 H7C1D1 291 aa13.13□□□□□ -0.31
TNC-213ENST00000544972 SMARCA1P28370 1054 aa13.13□□□□□ -0.31
TNC-213ENST00000544972 TNNI2P48788 182 aa13.13□□□□□ -0.31
TNC-213ENST00000544972 UBE2HP62256 183 aa13.13□□□□□ -0.31
TNC-213ENST00000544972 TNFAIP1Q13829 316 aa13.13□□□□□ -0.31
TNC-213ENST00000544972 NPY5RQ15761 445 aa13.13□□□□□ -0.31
TNC-213ENST00000544972 DIS3L2Q8IYB7 885 aaKnown RBP13.13□□□□□ -0.31
TNC-213ENST00000544972 TRPM4Q8TD43 1214 aa13.13□□□□□ -0.31
TNC-213ENST00000544972 PIBF1Q8WXW3 757 aa13.13□□□□□ -0.31
TNC-213ENST00000544972 SPATA32Q96LK8 384 aa13.13□□□□□ -0.31
TNC-213ENST00000544972 RNF181Q9P0P0 153 aa13.13□□□□□ -0.31
TNC-213ENST00000544972 RBM27Q9P2N5 1060 aaKnown RBP13.13□□□□□ -0.31
TNC-213ENST00000544972 RCOR1Q9UKL0 485 aa13.13□□□□□ -0.31
TNC-213ENST00000544972 MBD3O95983 291 aa13.12□□□□□ -0.31
TNC-213ENST00000544972 EPS15P42566 896 aa13.12□□□□□ -0.31
TNC-213ENST00000544972 ATP2B2Q01814 1243 aa13.12□□□□□ -0.31
TNC-213ENST00000544972 CEBPZQ03701 1054 aaKnown RBP13.12□□□□□ -0.31
TNC-213ENST00000544972 ICA1Q05084 483 aa13.12□□□□□ -0.31
TNC-213ENST00000544972 ZNF543Q08ER8 600 aa13.12□□□□□ -0.31
TNC-213ENST00000544972 OXER1Q8TDS5 423 aa13.12□□□□□ -0.31
TNC-213ENST00000544972 ZNF396Q96N95 335 aaPredicted RBP13.12□□□□□ -0.31
TNC-213ENST00000544972 FOXP1Q9H334 677 aaPredicted RBP13.12□□□□□ -0.31
TNC-213ENST00000544972 RIOX1Q9H6W3 641 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms