RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 RPAP3Q9H6T3 665 aaPredicted RBP22.51■■□□□ 1.19
LTBR-211ENST00000543190 BTBD7Q9P203 1132 aa22.51■■□□□ 1.19
LTBR-211ENST00000543190 ZSCAN25Q6NSZ9 544 aa22.5■■□□□ 1.19
LTBR-211ENST00000543190 SIAH1Q8IUQ4 282 aa22.5■■□□□ 1.19
LTBR-211ENST00000543190 EDC3Q96F86 508 aaKnown RBP22.5■■□□□ 1.19
LTBR-211ENST00000543190 BOLA2Q9H3K6 86 aa22.5■■□□□ 1.19
LTBR-211ENST00000543190 ARMT1Q9H993 441 aa22.5■■□□□ 1.19
LTBR-211ENST00000543190 TMX2Q9Y320 296 aa22.5■■□□□ 1.19
LTBR-211ENST00000543190 ZYXQ15942 572 aaKnown RBP22.49■■□□□ 1.19
LTBR-211ENST00000543190 C16orf86Q6ZW13 317 aa22.49■■□□□ 1.19
LTBR-211ENST00000543190 GDF15Q99988 308 aa22.49■■□□□ 1.19
LTBR-211ENST00000543190 SH2D4AQ9H788 454 aa22.49■■□□□ 1.19
LTBR-211ENST00000543190 COL11A1P12107 1806 aaPredicted RBP22.49■■□□□ 1.19
LTBR-211ENST00000543190 APBB1O00213 710 aa22.48■■□□□ 1.19
LTBR-211ENST00000543190 MSCO60682 206 aa22.48■■□□□ 1.19
LTBR-211ENST00000543190 MBD4O95243 580 aa22.48■■□□□ 1.19
LTBR-211ENST00000543190 EVX2Q03828 476 aa22.48■■□□□ 1.19
LTBR-211ENST00000543190 CCL14Q16627 93 aa22.48■■□□□ 1.19
LTBR-211ENST00000543190 C11orf49Q9H6J7 331 aa22.48■■□□□ 1.19
LTBR-211ENST00000543190 GIMAP6Q6P9H5 292 aa22.47■■□□□ 1.19
LTBR-211ENST00000543190 ABRAQ8N0Z2 381 aa22.47■■□□□ 1.19
LTBR-211ENST00000543190 DCTPP1Q9H773 170 aa22.47■■□□□ 1.19
LTBR-211ENST00000543190 ADAMTS5Q9UNA0 930 aa22.47■■□□□ 1.19
LTBR-211ENST00000543190 IVNS1ABPQ9Y6Y0 642 aa22.47■■□□□ 1.19
LTBR-211ENST00000543190 PFASO15067 1338 aa22.47■■□□□ 1.19
LTBR-211ENST00000543190 PRKAB2O43741 272 aa22.46■■□□□ 1.19
LTBR-211ENST00000543190 CDK8P49336 464 aa22.46■■□□□ 1.19
LTBR-211ENST00000543190 MFSD14CQ5VZR4 134 aa22.46■■□□□ 1.19
LTBR-211ENST00000543190 OLFML2BQ68BL8 750 aa22.46■■□□□ 1.19
LTBR-211ENST00000543190 AMOTL1Q8IY63 956 aa22.46■■□□□ 1.19
LTBR-211ENST00000543190 SLC44A5Q8NCS7 719 aa22.46■■□□□ 1.19
LTBR-211ENST00000543190 VCPKMTQ9H867 229 aa22.46■■□□□ 1.19
LTBR-211ENST00000543190 ARHGEF10LQ9HCE6 1279 aa22.46■■□□□ 1.19
LTBR-211ENST00000543190 USP17L12C9JPN9 530 aa22.45■■□□□ 1.18
LTBR-211ENST00000543190 USP17L21D6R901 530 aa22.45■■□□□ 1.18
LTBR-211ENST00000543190 WDR46O15213 610 aaKnown RBP22.45■■□□□ 1.18
LTBR-211ENST00000543190 CYP2D6P10635 497 aa22.45■■□□□ 1.18
LTBR-211ENST00000543190 CCND3P30281 292 aaPredicted RBP22.45■■□□□ 1.18
LTBR-211ENST00000543190 DSG3P32926 999 aa22.45■■□□□ 1.18
LTBR-211ENST00000543190 SBK1Q52WX2 424 aa22.45■■□□□ 1.18
LTBR-211ENST00000543190 C20orf194Q5TEA3 1177 aa22.45■■□□□ 1.18
LTBR-211ENST00000543190 DDRGK1Q96HY6 314 aa22.45■■□□□ 1.18
LTBR-211ENST00000543190 MOV10L1Q9BXT6 1211 aaKnown RBP22.45■■□□□ 1.18
LTBR-211ENST00000543190 SPATC1LQ9H0A9 340 aa22.45■■□□□ 1.18
LTBR-211ENST00000543190 KANSL2Q9H9L4 492 aa22.45■■□□□ 1.18
LTBR-211ENST00000543190 ECHDC1Q9NTX5 307 aa22.45■■□□□ 1.18
LTBR-211ENST00000543190 MPHOSPH10O00566 681 aaKnown RBP22.44■■□□□ 1.18
LTBR-211ENST00000543190 ICA1Q05084 483 aa22.44■■□□□ 1.18
LTBR-211ENST00000543190 KIAA1755Q5JYT7 1200 aa22.44■■□□□ 1.18
LTBR-211ENST00000543190 GPR153Q6NV75 609 aa22.44■■□□□ 1.18
LTBR-211ENST00000543190 DYNLL2Q96FJ2 89 aa22.44■■□□□ 1.18
LTBR-211ENST00000543190 ROBO3Q96MS0 1386 aa22.44■■□□□ 1.18
LTBR-211ENST00000543190 MROH8Q9H579 483 aa22.44■■□□□ 1.18
LTBR-211ENST00000543190 FLRT1Q9NZU1 646 aa22.44■■□□□ 1.18
LTBR-211ENST00000543190 ARPP21Q9UBL0 812 aaPredicted RBP22.44■■□□□ 1.18
LTBR-211ENST00000543190 SMCHD1A6NHR9 2005 aa22.43■■□□□ 1.18
LTBR-211ENST00000543190 PLXNA1Q9UIW2 1896 aa22.43■■□□□ 1.18
LTBR-211ENST00000543190 AKR1B1P15121 316 aa22.43■■□□□ 1.18
LTBR-211ENST00000543190 CTR9Q6PD62 1173 aa22.43■■□□□ 1.18
LTBR-211ENST00000543190 KBTBD3Q8NAB2 608 aa22.43■■□□□ 1.18
LTBR-211ENST00000543190 PUS7LQ9H0K6 701 aaKnown RBP22.43■■□□□ 1.18
LTBR-211ENST00000543190 MYH4Q9Y623 1939 aa22.42■■□□□ 1.18
LTBR-211ENST00000543190 CYBAP13498 195 aa22.42■■□□□ 1.18
LTBR-211ENST00000543190 SLFNL1Q499Z3 407 aa22.42■■□□□ 1.18
LTBR-211ENST00000543190 STRBPQ96SI9 672 aaKnown RBP22.42■■□□□ 1.18
LTBR-211ENST00000543190 CWC22Q9HCG8 908 aaKnown RBP22.42■■□□□ 1.18
LTBR-211ENST00000543190 ZFYP08048 801 aaPredicted RBP22.41■■□□□ 1.18
LTBR-211ENST00000543190 ATP2B2Q01814 1243 aa22.41■■□□□ 1.18
LTBR-211ENST00000543190 NPLOC4Q8TAT6 608 aa22.41■■□□□ 1.18
LTBR-211ENST00000543190 TANGO6Q9C0B7 1094 aa22.41■■□□□ 1.18
LTBR-211ENST00000543190 DDX20Q9UHI6 824 aaKnown RBP22.41■■□□□ 1.18
LTBR-211ENST00000543190 SLC4A4Q9Y6R1 1079 aa22.41■■□□□ 1.18
LTBR-211ENST00000543190 ADORA2AP29274 412 aa22.4■■□□□ 1.18
LTBR-211ENST00000543190 SLC5A4Q9NY91 659 aa22.4■■□□□ 1.18
LTBR-211ENST00000543190 SYNPO2Q9UMS6 1093 aa22.4■■□□□ 1.18
LTBR-211ENST00000543190 COL6A3P12111 3177 aa22.4■■□□□ 1.18
LTBR-211ENST00000543190 GSG1L2A8MUP6 293 aa22.39■■□□□ 1.17
LTBR-211ENST00000543190 FLOT1O75955 427 aa22.39■■□□□ 1.17
LTBR-211ENST00000543190 SLC25A27O95847 323 aa22.39■■□□□ 1.17
LTBR-211ENST00000543190 CHGBP05060 677 aa22.39■■□□□ 1.17
LTBR-211ENST00000543190 ERCC3P19447 782 aa22.39■■□□□ 1.17
LTBR-211ENST00000543190 APPBP2Q92624 585 aa22.39■■□□□ 1.17
LTBR-211ENST00000543190 GPATCH3Q96I76 525 aa22.39■■□□□ 1.17
LTBR-211ENST00000543190 STAP2Q9UGK3 403 aa22.39■■□□□ 1.17
LTBR-211ENST00000543190 NRBP1Q9UHY1 535 aa22.39■■□□□ 1.17
LTBR-211ENST00000543190 CYP2D7A0A087X1C5 515 aa22.38■■□□□ 1.17
LTBR-211ENST00000543190 SMIM22K7EJ46 135 aa22.38■■□□□ 1.17
LTBR-211ENST00000543190 DNM1LO00429 736 aa22.38■■□□□ 1.17
LTBR-211ENST00000543190 EEF2P13639 858 aaKnown RBP22.38■■□□□ 1.17
LTBR-211ENST00000543190 LRIT3Q3SXY7 679 aa22.38■■□□□ 1.17
LTBR-211ENST00000543190 WDR78Q5VTH9 848 aa22.38■■□□□ 1.17
LTBR-211ENST00000543190 C7orf61Q8IZ16 206 aa22.38■■□□□ 1.17
LTBR-211ENST00000543190 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.38■■□□□ 1.17
LTBR-211ENST00000543190 GOPCQ9HD26 462 aa22.38■■□□□ 1.17
LTBR-211ENST00000543190 TTC41PQ6P2S7 1318 aa22.37■■□□□ 1.17
LTBR-211ENST00000543190 GNAT2P19087 354 aa22.37■■□□□ 1.17
LTBR-211ENST00000543190 COPB2P35606 906 aa22.37■■□□□ 1.17
LTBR-211ENST00000543190 DPP9Q86TI2 863 aa22.37■■□□□ 1.17
LTBR-211ENST00000543190 RIOX2Q8IUF8 465 aa22.37■■□□□ 1.17
LTBR-211ENST00000543190 CLEC10AQ8IUN9 316 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms