RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 C11orf49Q9H6J7 331 aa23.7■■□□□ 1.38
CACNA1C-230ENST00000543114 SWAP70Q9UH65 585 aa23.7■■□□□ 1.38
CACNA1C-230ENST00000543114 PFASO15067 1338 aa23.69■■□□□ 1.38
CACNA1C-230ENST00000543114 SMARCA5O60264 1052 aaPredicted RBP23.69■■□□□ 1.38
CACNA1C-230ENST00000543114 KIAA1755Q5JYT7 1200 aa23.69■■□□□ 1.38
CACNA1C-230ENST00000543114 LRRCC1Q9C099 1032 aa23.69■■□□□ 1.38
CACNA1C-230ENST00000543114 FLRT1Q9NZU1 646 aa23.69■■□□□ 1.38
CACNA1C-230ENST00000543114 CYP2D7A0A087X1C5 515 aa23.68■■□□□ 1.38
CACNA1C-230ENST00000543114 AKR1B1P15121 316 aa23.68■■□□□ 1.38
CACNA1C-230ENST00000543114 PTPREP23469 700 aa23.68■■□□□ 1.38
CACNA1C-230ENST00000543114 GRB14Q14449 540 aa23.68■■□□□ 1.38
CACNA1C-230ENST00000543114 ATP8A2Q9NTI2 1148 aa23.68■■□□□ 1.38
CACNA1C-230ENST00000543114 SLC15A5A6NIM6 579 aa23.67■■□□□ 1.38
CACNA1C-230ENST00000543114 GLRX3O76003 335 aaKnown RBP23.67■■□□□ 1.38
CACNA1C-230ENST00000543114 LHX8Q68G74 356 aa23.67■■□□□ 1.38
CACNA1C-230ENST00000543114 TANGO6Q9C0B7 1094 aa23.67■■□□□ 1.38
CACNA1C-230ENST00000543114 DNAH12Q6ZR08 3092 aa23.66■■□□□ 1.38
CACNA1C-230ENST00000543114 COL11A1P12107 1806 aaPredicted RBP23.66■■□□□ 1.38
CACNA1C-230ENST00000543114 ICA1Q05084 483 aa23.66■■□□□ 1.38
CACNA1C-230ENST00000543114 UBE3CQ15386 1083 aa23.66■■□□□ 1.38
CACNA1C-230ENST00000543114 SIAH1Q8IUQ4 282 aa23.66■■□□□ 1.38
CACNA1C-230ENST00000543114 STAP2Q9UGK3 403 aa23.66■■□□□ 1.38
CACNA1C-230ENST00000543114 ZMYND8Q9ULU4 1186 aaPredicted RBP23.66■■□□□ 1.38
CACNA1C-230ENST00000543114 IVNS1ABPQ9Y6Y0 642 aa23.66■■□□□ 1.38
CACNA1C-230ENST00000543114 GREB1LQ9C091 1923 aaPredicted RBP23.66■■□□□ 1.38
CACNA1C-230ENST00000543114 COG2Q14746 738 aa23.65■■□□□ 1.38
CACNA1C-230ENST00000543114 C12orf60Q5U649 245 aa23.65■■□□□ 1.38
CACNA1C-230ENST00000543114 NPLOC4Q8TAT6 608 aa23.65■■□□□ 1.38
CACNA1C-230ENST00000543114 MOV10L1Q9BXT6 1211 aaKnown RBP23.65■■□□□ 1.38
CACNA1C-230ENST00000543114 PUS7LQ9H0K6 701 aaKnown RBP23.65■■□□□ 1.38
CACNA1C-230ENST00000543114 USP17L12C9JPN9 530 aa23.64■■□□□ 1.37
CACNA1C-230ENST00000543114 USP17L21D6R901 530 aa23.64■■□□□ 1.37
CACNA1C-230ENST00000543114 HOXC6P09630 235 aa23.64■■□□□ 1.37
CACNA1C-230ENST00000543114 C16orf86Q6ZW13 317 aa23.64■■□□□ 1.37
CACNA1C-230ENST00000543114 SPICE1Q8N0Z3 855 aa23.64■■□□□ 1.37
CACNA1C-230ENST00000543114 LPAR1Q92633 364 aa23.64■■□□□ 1.37
CACNA1C-230ENST00000543114 ARHGEF10LQ9HCE6 1279 aa23.64■■□□□ 1.37
CACNA1C-230ENST00000543114 SLC4A4Q9Y6R1 1079 aa23.64■■□□□ 1.37
CACNA1C-230ENST00000543114 A0A1W2PPC1 479 aa23.63■■□□□ 1.37
CACNA1C-230ENST00000543114 COL6A1P12109 1028 aa23.63■■□□□ 1.37
CACNA1C-230ENST00000543114 CDK8P49336 464 aa23.63■■□□□ 1.37
CACNA1C-230ENST00000543114 MFSD14CQ5VZR4 134 aa23.63■■□□□ 1.37
CACNA1C-230ENST00000543114 SPATC1LQ9H0A9 340 aa23.63■■□□□ 1.37
CACNA1C-230ENST00000543114 VCPKMTQ9H867 229 aa23.63■■□□□ 1.37
CACNA1C-230ENST00000543114 TMX2Q9Y320 296 aa23.63■■□□□ 1.37
CACNA1C-230ENST00000543114 SYN1P17600 705 aa23.62■■□□□ 1.37
CACNA1C-230ENST00000543114 AMOTL1Q8IY63 956 aa23.62■■□□□ 1.37
CACNA1C-230ENST00000543114 GDF15Q99988 308 aa23.62■■□□□ 1.37
CACNA1C-230ENST00000543114 ECHDC1Q9NTX5 307 aa23.62■■□□□ 1.37
CACNA1C-230ENST00000543114 HOXC10Q9NYD6 342 aa23.62■■□□□ 1.37
CACNA1C-230ENST00000543114 SOX1O00570 391 aaPredicted RBP23.61■■□□□ 1.37
CACNA1C-230ENST00000543114 FLOT1O75955 427 aa23.61■■□□□ 1.37
CACNA1C-230ENST00000543114 IGHA2P01877 340 aa23.61■■□□□ 1.37
CACNA1C-230ENST00000543114 ERCC3P19447 782 aa23.61■■□□□ 1.37
CACNA1C-230ENST00000543114 ADORA2AP29274 412 aa23.61■■□□□ 1.37
CACNA1C-230ENST00000543114 DSG3P32926 999 aa23.61■■□□□ 1.37
CACNA1C-230ENST00000543114 CYP2C19P33261 490 aa23.61■■□□□ 1.37
CACNA1C-230ENST00000543114 TSHZ3Q63HK5 1081 aa23.61■■□□□ 1.37
CACNA1C-230ENST00000543114 ZSCAN25Q6NSZ9 544 aa23.61■■□□□ 1.37
CACNA1C-230ENST00000543114 CTR9Q6PD62 1173 aa23.61■■□□□ 1.37
CACNA1C-230ENST00000543114 ATG4CQ96DT6 458 aa23.61■■□□□ 1.37
CACNA1C-230ENST00000543114 DDRGK1Q96HY6 314 aa23.61■■□□□ 1.37
CACNA1C-230ENST00000543114 CCDC17Q96LX7 622 aa23.61■■□□□ 1.37
CACNA1C-230ENST00000543114 SH2D4AQ9H788 454 aa23.61■■□□□ 1.37
CACNA1C-230ENST00000543114 ATP2B2Q01814 1243 aa23.6■■□□□ 1.37
CACNA1C-230ENST00000543114 SHCBP1Q8NEM2 672 aa23.6■■□□□ 1.37
CACNA1C-230ENST00000543114 DDX20Q9UHI6 824 aaKnown RBP23.6■■□□□ 1.37
CACNA1C-230ENST00000543114 MB21D1Q8N884 522 aa23.59■■□□□ 1.37
CACNA1C-230ENST00000543114 TRPV1Q8NER1 839 aa23.59■■□□□ 1.37
CACNA1C-230ENST00000543114 ARPP21Q9UBL0 812 aaPredicted RBP23.59■■□□□ 1.37
CACNA1C-230ENST00000543114 WDR46O15213 610 aaKnown RBP23.58■■□□□ 1.37
CACNA1C-230ENST00000543114 CYBAP13498 195 aa23.58■■□□□ 1.37
CACNA1C-230ENST00000543114 EEF2P13639 858 aaKnown RBP23.58■■□□□ 1.37
CACNA1C-230ENST00000543114 LRRC26Q2I0M4 334 aa23.58■■□□□ 1.37
CACNA1C-230ENST00000543114 KBTBD3Q8NAB2 608 aa23.58■■□□□ 1.37
CACNA1C-230ENST00000543114 STRBPQ96SI9 672 aaKnown RBP23.58■■□□□ 1.37
CACNA1C-230ENST00000543114 DCTPP1Q9H773 170 aa23.58■■□□□ 1.37
CACNA1C-230ENST00000543114 ZNFX1Q9P2E3 1918 aaKnown RBP23.58■■□□□ 1.37
CACNA1C-230ENST00000543114 CNGA1P29973 690 aa23.57■■□□□ 1.36
CACNA1C-230ENST00000543114 BMP8BP34820 402 aa23.57■■□□□ 1.36
CACNA1C-230ENST00000543114 MAGEA10P43363 369 aaPredicted RBP23.57■■□□□ 1.36
CACNA1C-230ENST00000543114 PLS1Q14651 629 aa23.57■■□□□ 1.36
CACNA1C-230ENST00000543114 SAMD1Q6SPF0 538 aaPredicted RBP23.57■■□□□ 1.36
CACNA1C-230ENST00000543114 DPP9Q86TI2 863 aa23.57■■□□□ 1.36
CACNA1C-230ENST00000543114 LRCH3Q96II8 777 aa23.57■■□□□ 1.36
CACNA1C-230ENST00000543114 FBXO28Q9NVF7 368 aa23.57■■□□□ 1.36
CACNA1C-230ENST00000543114 ROBO3Q96MS0 1386 aa23.56■■□□□ 1.36
CACNA1C-230ENST00000543114 PLXNA1Q9UIW2 1896 aa23.56■■□□□ 1.36
CACNA1C-230ENST00000543114 COBLO75128 1261 aa23.56■■□□□ 1.36
CACNA1C-230ENST00000543114 OLFML2BQ68BL8 750 aa23.56■■□□□ 1.36
CACNA1C-230ENST00000543114 NCAPG2Q86XI2 1143 aa23.56■■□□□ 1.36
CACNA1C-230ENST00000543114 OSBP2Q969R2 916 aa23.56■■□□□ 1.36
CACNA1C-230ENST00000543114 GPATCH3Q96I76 525 aa23.56■■□□□ 1.36
CACNA1C-230ENST00000543114 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.56■■□□□ 1.36
CACNA1C-230ENST00000543114 KANSL2Q9H9L4 492 aa23.56■■□□□ 1.36
CACNA1C-230ENST00000543114 MYH4Q9Y623 1939 aa23.55■■□□□ 1.36
CACNA1C-230ENST00000543114 STRNO43815 780 aa23.55■■□□□ 1.36
CACNA1C-230ENST00000543114 MSCO60682 206 aa23.55■■□□□ 1.36
CACNA1C-230ENST00000543114 TMEM132BQ14DG7 1078 aa23.55■■□□□ 1.36
CACNA1C-230ENST00000543114 APPBP2Q92624 585 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms