RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 GRIK5Q16478 980 aa7.26□□□□□ -1.25
CPSF7-220ENST00000541963 DDB1Q16531 1140 aa7.26□□□□□ -1.25
CPSF7-220ENST00000541963 HP1BP3Q5SSJ5 553 aaPredicted RBP7.26□□□□□ -1.25
CPSF7-220ENST00000541963 TRAPPC3LQ5T215 181 aa7.26□□□□□ -1.25
CPSF7-220ENST00000541963 LLGL2Q6P1M3 1020 aa7.26□□□□□ -1.25
CPSF7-220ENST00000541963 TXNDC11Q6PKC3 985 aa7.26□□□□□ -1.25
CPSF7-220ENST00000541963 LYPD4Q6UWN0 246 aa7.26□□□□□ -1.25
CPSF7-220ENST00000541963 KLHL23Q8NBE8 558 aa7.26□□□□□ -1.25
CPSF7-220ENST00000541963 CORO1BQ9BR76 489 aa7.26□□□□□ -1.25
CPSF7-220ENST00000541963 TINF2Q9BSI4 451 aa7.26□□□□□ -1.25
CPSF7-220ENST00000541963 TLR6Q9Y2C9 796 aa7.26□□□□□ -1.25
CPSF7-220ENST00000541963 BLMP54132 1417 aaPredicted RBP7.26□□□□□ -1.25
CPSF7-220ENST00000541963 BRWD3Q6RI45 1802 aa7.25□□□□□ -1.25
CPSF7-220ENST00000541963 SPDYE3A6NKU9 549 aa7.25□□□□□ -1.25
CPSF7-220ENST00000541963 SHISA8B8ZZ34 492 aa7.25□□□□□ -1.25
CPSF7-220ENST00000541963 PAGE1O75459 146 aa7.25□□□□□ -1.25
CPSF7-220ENST00000541963 FAM160A1Q05DH4 1040 aa7.25□□□□□ -1.25
CPSF7-220ENST00000541963 SCARA3Q6AZY7 606 aa7.25□□□□□ -1.25
CPSF7-220ENST00000541963 ADAMTSL4Q6UY14 1074 aa7.25□□□□□ -1.25
CPSF7-220ENST00000541963 C8orf86Q6ZUL3 223 aa7.25□□□□□ -1.25
CPSF7-220ENST00000541963 CCDC84Q86UT8 332 aaPredicted RBP7.25□□□□□ -1.25
CPSF7-220ENST00000541963 DMRTC2Q8IXT2 367 aaPredicted RBP7.25□□□□□ -1.25
CPSF7-220ENST00000541963 GOLM1Q8NBJ4 401 aa7.25□□□□□ -1.25
CPSF7-220ENST00000541963 JARID2Q92833 1246 aaPredicted RBP7.25□□□□□ -1.25
CPSF7-220ENST00000541963 KCNB2Q92953 911 aa7.25□□□□□ -1.25
CPSF7-220ENST00000541963 PANK3Q9H999 370 aa7.25□□□□□ -1.25
CPSF7-220ENST00000541963 PRKAG2Q9UGJ0 569 aa7.25□□□□□ -1.25
CPSF7-220ENST00000541963 ADAMTS1Q9UHI8 967 aa7.25□□□□□ -1.25
CPSF7-220ENST00000541963 ABCC6O95255 1503 aa7.25□□□□□ -1.25
CPSF7-220ENST00000541963 OVOS2A0A0J9YW53 1432 aa7.25□□□□□ -1.25
CPSF7-220ENST00000541963 OVOS2Q6IE36 1432 aa7.25□□□□□ -1.25
CPSF7-220ENST00000541963 USP54Q70EL1 1684 aa7.25□□□□□ -1.25
CPSF7-220ENST00000541963 COL18A1P39060 1754 aa7.24□□□□□ -1.25
CPSF7-220ENST00000541963 NFAT5O94916 1531 aa7.24□□□□□ -1.25
CPSF7-220ENST00000541963 BPNT1O95861 308 aa7.24□□□□□ -1.25
CPSF7-220ENST00000541963 TFE3P19532 575 aaPredicted RBP7.24□□□□□ -1.25
CPSF7-220ENST00000541963 BMP6P22004 513 aa7.24□□□□□ -1.25
CPSF7-220ENST00000541963 SUZ12Q15022 739 aaKnown RBP7.24□□□□□ -1.25
CPSF7-220ENST00000541963 POU4F3Q15319 338 aa7.24□□□□□ -1.25
CPSF7-220ENST00000541963 SVOPQ8N4V2 548 aa7.24□□□□□ -1.25
CPSF7-220ENST00000541963 LTV1Q96GA3 475 aaPredicted RBP7.24□□□□□ -1.25
CPSF7-220ENST00000541963 NT5C1AQ9BXI3 368 aa7.24□□□□□ -1.25
CPSF7-220ENST00000541963 KNSTRNQ9Y448 316 aa7.24□□□□□ -1.25
CPSF7-220ENST00000541963 NSD3Q9BZ95 1437 aa7.24□□□□□ -1.25
CPSF7-220ENST00000541963 MAP3K19Q56UN5 1328 aa7.24□□□□□ -1.25
CPSF7-220ENST00000541963 GSTP1P09211 210 aaKnown RBP7.23□□□□□ -1.25
CPSF7-220ENST00000541963 IL2RBP14784 551 aa7.23□□□□□ -1.25
CPSF7-220ENST00000541963 HOXC9P31274 260 aa7.23□□□□□ -1.25
CPSF7-220ENST00000541963 GJA8P48165 433 aa7.23□□□□□ -1.25
CPSF7-220ENST00000541963 RAC1P63000 192 aa7.23□□□□□ -1.25
CPSF7-220ENST00000541963 APOBRQ0VD83 1088 aa7.23□□□□□ -1.25
CPSF7-220ENST00000541963 FBXL19Q6PCT2 694 aa7.23□□□□□ -1.25
CPSF7-220ENST00000541963 TREML4Q6UXN2 200 aa7.23□□□□□ -1.25
CPSF7-220ENST00000541963 TRIM42Q8IWZ5 723 aa7.23□□□□□ -1.25
CPSF7-220ENST00000541963 DTWD1Q8N5C7 304 aa7.23□□□□□ -1.25
CPSF7-220ENST00000541963 UBXN4Q92575 508 aa7.23□□□□□ -1.25
CPSF7-220ENST00000541963 ACSBG1Q96GR2 724 aa7.23□□□□□ -1.25
CPSF7-220ENST00000541963 RHOVQ96L33 236 aa7.23□□□□□ -1.25
CPSF7-220ENST00000541963 LTN1O94822 1766 aa7.23□□□□□ -1.25
CPSF7-220ENST00000541963 RGPD5Q99666 1765 aa7.23□□□□□ -1.25
CPSF7-220ENST00000541963 THSD7AQ9UPZ6 1657 aa7.22□□□□□ -1.25
CPSF7-220ENST00000541963 KIF24Q5T7B8 1368 aa7.22□□□□□ -1.25
CPSF7-220ENST00000541963 SMG6Q86US8 1419 aaKnown RBP7.22□□□□□ -1.25
CPSF7-220ENST00000541963 PPM1GO15355 546 aaPredicted RBP7.22□□□□□ -1.25
CPSF7-220ENST00000541963 IGSF3O75054 1194 aa7.22□□□□□ -1.25
CPSF7-220ENST00000541963 TRIM37O94972 964 aa7.22□□□□□ -1.25
CPSF7-220ENST00000541963 APBA3O96018 575 aa7.22□□□□□ -1.25
CPSF7-220ENST00000541963 COL9A2Q14055 689 aaPredicted RBP7.22□□□□□ -1.25
CPSF7-220ENST00000541963 RRS1Q15050 365 aaKnown RBP7.22□□□□□ -1.25
CPSF7-220ENST00000541963 MAP1SQ66K74 1059 aaPredicted RBP7.22□□□□□ -1.25
CPSF7-220ENST00000541963 NKD1Q969G9 470 aa7.22□□□□□ -1.25
CPSF7-220ENST00000541963 ZNF775Q96BV0 537 aaPredicted RBP7.22□□□□□ -1.25
CPSF7-220ENST00000541963 SEC16BQ96JE7 1060 aa7.22□□□□□ -1.25
CPSF7-220ENST00000541963 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.22□□□□□ -1.251e-7■■■■□ 23.7
CPSF7-220ENST00000541963 USP26Q9BXU7 913 aa7.22□□□□□ -1.25
CPSF7-220ENST00000541963 RTL1A6NKG5 1358 aa7.21□□□□□ -1.25
CPSF7-220ENST00000541963 FBLN1P23142 703 aa7.21□□□□□ -1.26
CPSF7-220ENST00000541963 MAOBP27338 520 aa7.21□□□□□ -1.26
CPSF7-220ENST00000541963 PDE3AQ14432 1141 aa7.21□□□□□ -1.26
CPSF7-220ENST00000541963 CWF19L2Q2TBE0 894 aaKnown RBP7.21□□□□□ -1.26
CPSF7-220ENST00000541963 DEFB132Q7Z7B7 95 aa7.21□□□□□ -1.26
CPSF7-220ENST00000541963 MORC1Q86VD1 984 aa7.21□□□□□ -1.26
CPSF7-220ENST00000541963 RASGRP4Q8TDF6 673 aa7.21□□□□□ -1.26
CPSF7-220ENST00000541963 CPLX3Q8WVH0 158 aa7.21□□□□□ -1.26
CPSF7-220ENST00000541963 KLHDC7BQ96G42 594 aa7.21□□□□□ -1.26
CPSF7-220ENST00000541963 GMLQ99445 158 aa7.21□□□□□ -1.26
CPSF7-220ENST00000541963 ZC3H12CQ9C0D7 883 aaKnown RBP7.21□□□□□ -1.26
CPSF7-220ENST00000541963 KCNQ5Q9NR82 932 aa7.21□□□□□ -1.26
CPSF7-220ENST00000541963 PCDHB5Q9Y5E4 795 aa7.21□□□□□ -1.26
CPSF7-220ENST00000541963 KIF20BQ96Q89 1820 aa7.21□□□□□ -1.26
CPSF7-220ENST00000541963 NSD2O96028 1365 aa7.2□□□□□ -1.26
CPSF7-220ENST00000541963 FLT4P35916 1363 aa7.2□□□□□ -1.26
CPSF7-220ENST00000541963 OVOS2A0A0G2JMS6 1433 aa7.2□□□□□ -1.26
CPSF7-220ENST00000541963 GREM1O60565 184 aa7.2□□□□□ -1.26
CPSF7-220ENST00000541963 SSBP05455 408 aaKnown RBP eCLIP7.2□□□□□ -1.26
CPSF7-220ENST00000541963 NID1P14543 1247 aa7.2□□□□□ -1.26
CPSF7-220ENST00000541963 ATF4P18848 351 aaPredicted RBP7.2□□□□□ -1.26
CPSF7-220ENST00000541963 CD68P34810 354 aaPredicted RBP7.2□□□□□ -1.26
CPSF7-220ENST00000541963 GTF2F1P35269 517 aaKnown RBP eCLIP7.2□□□□□ -1.265e-10■■■■■ 57.2
CPSF7-220ENST00000541963 NLRP12P59046 1061 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms