RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 GUCY2DQ02846 1103 aa13.35□□□□□ -0.27
EIF3A-203ENST00000541549 NEDD9Q14511 834 aa13.35□□□□□ -0.27
EIF3A-203ENST00000541549 INF2Q27J81 1249 aa13.35□□□□□ -0.27
EIF3A-203ENST00000541549 LMNTD2Q8IXW0 634 aa13.35□□□□□ -0.27
EIF3A-203ENST00000541549 TSNARE1Q96NA8 513 aa13.35□□□□□ -0.27
EIF3A-203ENST00000541549 ZCCHC17Q9NP64 241 aaKnown RBP13.35□□□□□ -0.27
EIF3A-203ENST00000541549 SAMSN1Q9NSI8 373 aaKnown RBP13.35□□□□□ -0.27
EIF3A-203ENST00000541549 PKD2L1Q9P0L9 805 aa13.35□□□□□ -0.27
EIF3A-203ENST00000541549 DENND2AQ9ULE3 1009 aa13.35□□□□□ -0.27
EIF3A-203ENST00000541549 ZNF131P52739 623 aa13.35□□□□□ -0.27
EIF3A-203ENST00000541549 ANKRD42Q8N9B4 389 aa13.35□□□□□ -0.27
EIF3A-203ENST00000541549 ACRBPQ8NEB7 543 aa13.35□□□□□ -0.27
EIF3A-203ENST00000541549 ZNF622Q969S3 477 aaKnown RBP eCLIP13.35□□□□□ -0.275e-10■■■□□ 18.8
EIF3A-203ENST00000541549 FAM212AQ96EL1 285 aa13.35□□□□□ -0.27
EIF3A-203ENST00000541549 ZMYM6O95789 1325 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 SOWAHDA6NJG2 315 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 ABCB4P21439 1286 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 RBL2Q08999 1139 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 RESTQ13127 1097 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 SF3B2Q13435 895 aaKnown RBP13.34□□□□□ -0.27
EIF3A-203ENST00000541549 NECTIN1Q15223 517 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 TEX11Q8IYF3 940 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 SYMPKQ92797 1274 aaKnown RBP13.34□□□□□ -0.27
EIF3A-203ENST00000541549 PSMD1Q99460 953 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 CPSF2Q9P2I0 782 aaKnown RBP13.34□□□□□ -0.27
EIF3A-203ENST00000541549 USP17L12C9JPN9 530 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 USP17L21D6R901 530 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 RGS16O15492 202 aaPredicted RBP13.34□□□□□ -0.27
EIF3A-203ENST00000541549 PDE8AO60658 829 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 PDE6AP16499 860 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 COPB1P53618 953 aaKnown RBP13.34□□□□□ -0.27
EIF3A-203ENST00000541549 TFAP4Q01664 338 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 ADAT2Q7Z6V5 191 aaKnown RBP13.34□□□□□ -0.27
EIF3A-203ENST00000541549 KSR1Q8IVT5 923 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 IFNL3Q8IZI9 196 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 UBL4BQ8N7F7 174 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 TMEM87AQ8NBN3 555 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 EXOC4Q96A65 974 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 FERMT1Q9BQL6 677 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 DPH5Q9H2P9 285 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 TRPM2O94759 1503 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 KDM5DQ9BY66 1539 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 CLTAP09496 248 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 KRT5P13647 590 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 TRAF1Q13077 416 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 TPTE2Q6XPS3 522 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 TAOK1Q7L7X3 1001 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 ZNF804AQ7Z570 1209 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 ZNF526Q8TF50 670 aaPredicted RBP13.34□□□□□ -0.27
EIF3A-203ENST00000541549 ERVK-7P63135 1459 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 TNKSO95271 1327 aa13.34□□□□□ -0.27
EIF3A-203ENST00000541549 GOLGA8KD6RF30 607 aa13.33□□□□□ -0.27
EIF3A-203ENST00000541549 PLCG2P16885 1265 aa13.33□□□□□ -0.27
EIF3A-203ENST00000541549 SP4Q02446 784 aa13.33□□□□□ -0.27
EIF3A-203ENST00000541549 MTMR3Q13615 1198 aa13.33□□□□□ -0.27
EIF3A-203ENST00000541549 CCDC144BQ3MJ40 725 aa13.33□□□□□ -0.27
EIF3A-203ENST00000541549 GKAP1Q5VSY0 366 aaPredicted RBP13.33□□□□□ -0.27
EIF3A-203ENST00000541549 DENND2CQ68D51 928 aa13.33□□□□□ -0.27
EIF3A-203ENST00000541549 TTC16Q8NEE8 873 aa13.33□□□□□ -0.27
EIF3A-203ENST00000541549 SDR42E1Q8WUS8 393 aa13.33□□□□□ -0.27
EIF3A-203ENST00000541549 ORAI2Q96SN7 254 aa13.33□□□□□ -0.27
EIF3A-203ENST00000541549 MYCBPQ99417 103 aaPredicted RBP13.33□□□□□ -0.27
EIF3A-203ENST00000541549 KIF2CQ99661 725 aa13.33□□□□□ -0.27
EIF3A-203ENST00000541549 CSRNP2Q9H175 543 aa13.33□□□□□ -0.27
EIF3A-203ENST00000541549 COPRSQ9NQ92 184 aa13.33□□□□□ -0.27
EIF3A-203ENST00000541549 COMMD10Q9Y6G5 202 aa13.33□□□□□ -0.27
EIF3A-203ENST00000541549 FERP16591 822 aa13.33□□□□□ -0.28
EIF3A-203ENST00000541549 ERCC5P28715 1186 aaPredicted RBP13.33□□□□□ -0.28
EIF3A-203ENST00000541549 IFT88Q13099 833 aa13.33□□□□□ -0.28
EIF3A-203ENST00000541549 KMT5BQ4FZB7 885 aa13.33□□□□□ -0.28
EIF3A-203ENST00000541549 APOA5Q6Q788 366 aa13.33□□□□□ -0.28
EIF3A-203ENST00000541549 KRT25Q7Z3Z0 450 aa13.33□□□□□ -0.28
EIF3A-203ENST00000541549 DNAJC10Q8IXB1 793 aa13.33□□□□□ -0.28
EIF3A-203ENST00000541549 AIFM3Q96NN9 605 aa13.33□□□□□ -0.28
EIF3A-203ENST00000541549 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.33□□□□□ -0.28
EIF3A-203ENST00000541549 PCDHB13Q9Y5F0 798 aa13.33□□□□□ -0.28
EIF3A-203ENST00000541549 KRIT1O00522 736 aa13.33□□□□□ -0.28
EIF3A-203ENST00000541549 SARNPP82979 210 aaKnown RBP13.33□□□□□ -0.28
EIF3A-203ENST00000541549 MCUR1Q96AQ8 359 aa13.33□□□□□ -0.28
EIF3A-203ENST00000541549 NGLY1Q96IV0 654 aa13.33□□□□□ -0.28
EIF3A-203ENST00000541549 GJB4Q9NTQ9 266 aa13.33□□□□□ -0.28
EIF3A-203ENST00000541549 ADAM21Q9UKJ8 722 aa13.33□□□□□ -0.28
EIF3A-203ENST00000541549 CFAP65Q6ZU64 1925 aaKnown RBP13.33□□□□□ -0.28
EIF3A-203ENST00000541549 KIF23Q02241 960 aaPredicted RBP13.33□□□□□ -0.28
EIF3A-203ENST00000541549 EHHADHQ08426 723 aa13.33□□□□□ -0.28
EIF3A-203ENST00000541549 CALCRLQ16602 461 aa13.33□□□□□ -0.28
EIF3A-203ENST00000541549 TTLL7Q6ZT98 887 aa13.33□□□□□ -0.28
EIF3A-203ENST00000541549 MAEAQ7L5Y9 396 aa13.33□□□□□ -0.28
EIF3A-203ENST00000541549 ZC3H12CQ9C0D7 883 aaKnown RBP13.33□□□□□ -0.28
EIF3A-203ENST00000541549 RIPOR2Q9Y4F9 1068 aa13.33□□□□□ -0.28
EIF3A-203ENST00000541549 ATP2A2P16615 1042 aaKnown RBP13.32□□□□□ -0.28
EIF3A-203ENST00000541549 KRT15P19012 456 aa13.32□□□□□ -0.28
EIF3A-203ENST00000541549 HIBADHP31937 336 aaKnown RBP13.32□□□□□ -0.28
EIF3A-203ENST00000541549 PPARAQ07869 468 aa13.32□□□□□ -0.28
EIF3A-203ENST00000541549 BIRC3Q13489 604 aa13.32□□□□□ -0.28
EIF3A-203ENST00000541549 FMNL3Q8IVF7 1028 aa13.32□□□□□ -0.28
EIF3A-203ENST00000541549 PI4K2BQ8TCG2 481 aa13.32□□□□□ -0.28
EIF3A-203ENST00000541549 TFCP2L1Q9NZI6 479 aa13.32□□□□□ -0.28
EIF3A-203ENST00000541549 USP27XA6NNY8 438 aa13.32□□□□□ -0.28
EIF3A-203ENST00000541549 ARHGAP44Q17R89 818 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms