RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 ANKRD18BA2A2Z9 1011 aa9.99□□□□□ -0.81
CHD4-208ENST00000540960 EYA2O00167 538 aa9.99□□□□□ -0.81
CHD4-208ENST00000540960 SEC24BO95487 1268 aa9.99□□□□□ -0.81
CHD4-208ENST00000540960 ACRP10323 421 aa9.99□□□□□ -0.81
CHD4-208ENST00000540960 ATP5JP18859 108 aa9.99□□□□□ -0.81
CHD4-208ENST00000540960 ITGA6P23229 1130 aa9.99□□□□□ -0.81
CHD4-208ENST00000540960 RABGGTBP53611 331 aa9.99□□□□□ -0.81
CHD4-208ENST00000540960 FOXO4P98177 505 aa9.99□□□□□ -0.81
CHD4-208ENST00000540960 Q3C1V9 767 aa9.99□□□□□ -0.81
CHD4-208ENST00000540960 MORN1Q5T089 497 aa9.99□□□□□ -0.81
CHD4-208ENST00000540960 FKBP1CQ5VVH2 108 aa9.99□□□□□ -0.81
CHD4-208ENST00000540960 FAM178BQ8IXR5 827 aa9.99□□□□□ -0.81
CHD4-208ENST00000540960 TRMT44Q8IYL2 757 aaKnown RBP9.99□□□□□ -0.81
CHD4-208ENST00000540960 TDRD7Q8NHU6 1098 aaKnown RBP9.99□□□□□ -0.81
CHD4-208ENST00000540960 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.99□□□□□ -0.81
CHD4-208ENST00000540960 MPHOSPH8Q99549 860 aa9.99□□□□□ -0.81
CHD4-208ENST00000540960 ESYT1Q9BSJ8 1104 aa9.99□□□□□ -0.81
CHD4-208ENST00000540960 ASCC2Q9H1I8 757 aaPredicted RBP9.99□□□□□ -0.81
CHD4-208ENST00000540960 MSRAQ9UJ68 235 aa9.99□□□□□ -0.81
CHD4-208ENST00000540960 PLXNA3P51805 1871 aa9.98□□□□□ -0.81
CHD4-208ENST00000540960 MED19A0JLT2 244 aaPredicted RBP9.98□□□□□ -0.81
CHD4-208ENST00000540960 EPOPA6NHQ4 379 aa9.98□□□□□ -0.81
CHD4-208ENST00000540960 CSF1RP07333 972 aa9.98□□□□□ -0.81
CHD4-208ENST00000540960 ALADP13716 330 aa9.98□□□□□ -0.81
CHD4-208ENST00000540960 CHMLP26374 656 aa9.98□□□□□ -0.81
CHD4-208ENST00000540960 RFX5P48382 616 aaPredicted RBP9.98□□□□□ -0.81
CHD4-208ENST00000540960 NFIAQ12857 509 aa9.98□□□□□ -0.81
CHD4-208ENST00000540960 TCF15Q12870 199 aa9.98□□□□□ -0.81
CHD4-208ENST00000540960 C1orf53Q5VUE5 145 aa9.98□□□□□ -0.81
CHD4-208ENST00000540960 PI4K2BQ8TCG2 481 aa9.98□□□□□ -0.81
CHD4-208ENST00000540960 OTUD7AQ8TE49 926 aaPredicted RBP9.98□□□□□ -0.81
CHD4-208ENST00000540960 FAM151AQ8WW52 585 aa9.98□□□□□ -0.81
CHD4-208ENST00000540960 USP26Q9BXU7 913 aa9.98□□□□□ -0.81
CHD4-208ENST00000540960 PORCNQ9H237 461 aa9.98□□□□□ -0.81
CHD4-208ENST00000540960 PICK1Q9NRD5 415 aa9.98□□□□□ -0.81
CHD4-208ENST00000540960 TMOD2Q9NZR1 351 aa9.98□□□□□ -0.81
CHD4-208ENST00000540960 MORF4L1Q9UBU8 362 aa9.98□□□□□ -0.81
CHD4-208ENST00000540960 LOC285556D6RIA3 1793 aa9.98□□□□□ -0.81
CHD4-208ENST00000540960 DOCK1Q14185 1865 aa9.98□□□□□ -0.81
CHD4-208ENST00000540960 ATRXP46100 2492 aa9.97□□□□□ -0.81
CHD4-208ENST00000540960 RIF1Q5UIP0 2472 aaKnown RBP9.97□□□□□ -0.81
CHD4-208ENST00000540960 CHD6Q8TD26 2715 aa9.97□□□□□ -0.81
CHD4-208ENST00000540960 POTEB3A0JP26 581 aa9.97□□□□□ -0.81
CHD4-208ENST00000540960 PQBP1O60828 265 aaKnown RBP9.97□□□□□ -0.81
CHD4-208ENST00000540960 SSTR3P32745 418 aaPredicted RBP9.97□□□□□ -0.81
CHD4-208ENST00000540960 CYP2C19P33261 490 aa9.97□□□□□ -0.81
CHD4-208ENST00000540960 RGS2P41220 211 aa9.97□□□□□ -0.81
CHD4-208ENST00000540960 GYG1P46976 350 aa9.97□□□□□ -0.81
CHD4-208ENST00000540960 RAB30Q15771 203 aa9.97□□□□□ -0.81
CHD4-208ENST00000540960 TNNI3KQ59H18 835 aa9.97□□□□□ -0.81
CHD4-208ENST00000540960 CCDC158Q5M9N0 1113 aa9.97□□□□□ -0.81
CHD4-208ENST00000540960 POTEBQ6S5H4 581 aa9.97□□□□□ -0.81
CHD4-208ENST00000540960 ZNF365Q70YC5 407 aa9.97□□□□□ -0.81
CHD4-208ENST00000540960 SOCS4Q8WXH5 440 aa9.97□□□□□ -0.81
CHD4-208ENST00000540960 TEKT1Q969V4 418 aa9.97□□□□□ -0.81
CHD4-208ENST00000540960 ZDHHC15Q96MV8 337 aa9.97□□□□□ -0.81
CHD4-208ENST00000540960 ANP32EQ9BTT0 268 aa9.97□□□□□ -0.81
CHD4-208ENST00000540960 BCL11AQ9H165 835 aa9.97□□□□□ -0.81
CHD4-208ENST00000540960 CERS4Q9HA82 394 aa9.97□□□□□ -0.81
CHD4-208ENST00000540960 TMEM39AQ9NV64 488 aa9.97□□□□□ -0.81
CHD4-208ENST00000540960 PNMA3Q9UL41 463 aa9.97□□□□□ -0.81
CHD4-208ENST00000540960 NDUFB9Q9Y6M9 179 aa9.97□□□□□ -0.81
CHD4-208ENST00000540960 FPGT-TNNI3KV9GXZ4 949 aa9.97□□□□□ -0.81
CHD4-208ENST00000540960 TPRP12270 2363 aaKnown RBP9.97□□□□□ -0.81
CHD4-208ENST00000540960 MYO15AQ9UKN7 3530 aa9.96□□□□□ -0.81
CHD4-208ENST00000540960 SMCHD1A6NHR9 2005 aa9.96□□□□□ -0.81
CHD4-208ENST00000540960 KBTBD13C9JR72 458 aa9.96□□□□□ -0.82
CHD4-208ENST00000540960 HSP90AA1P07900 732 aaKnown RBP9.96□□□□□ -0.82
CHD4-208ENST00000540960 POU3F3P20264 500 aaPredicted RBP9.96□□□□□ -0.82
CHD4-208ENST00000540960 HDLBPQ00341 1268 aaKnown RBP9.96□□□□□ -0.82
CHD4-208ENST00000540960 FAAP100Q0VG06 881 aa9.96□□□□□ -0.82
CHD4-208ENST00000540960 COL9A2Q14055 689 aaPredicted RBP9.96□□□□□ -0.82
CHD4-208ENST00000540960 EPHA10Q5JZY3 1008 aa9.96□□□□□ -0.82
CHD4-208ENST00000540960 GORABQ5T7V8 394 aa9.96□□□□□ -0.82
CHD4-208ENST00000540960 RNF20Q5VTR2 975 aa9.96□□□□□ -0.82
CHD4-208ENST00000540960 GPR142Q7Z601 462 aa9.96□□□□□ -0.82
CHD4-208ENST00000540960 ARRDC4Q8NCT1 418 aa9.96□□□□□ -0.82
CHD4-208ENST00000540960 CNTNAP3BQ96NU0 1288 aa9.96□□□□□ -0.82
CHD4-208ENST00000540960 APBA2Q99767 749 aa9.96□□□□□ -0.82
CHD4-208ENST00000540960 CNTNAP3Q9BZ76 1288 aa9.96□□□□□ -0.82
CHD4-208ENST00000540960 SIL1Q9H173 461 aa9.96□□□□□ -0.82
CHD4-208ENST00000540960 CIZ1Q9ULV3 898 aaPredicted RBP9.96□□□□□ -0.82
CHD4-208ENST00000540960 IQSEC3Q9UPP2 1182 aaPredicted RBP9.96□□□□□ -0.82
CHD4-208ENST00000540960 PA2G4Q9UQ80 394 aaKnown RBP9.96□□□□□ -0.82
CHD4-208ENST00000540960 MROH5Q6ZUA9 1318 aa9.96□□□□□ -0.82
CHD4-208ENST00000540960 CFAP47Q6ZTR5 3102 aa9.96□□□□□ -0.82
CHD4-208ENST00000540960 ATRNL1Q5VV63 1379 aa9.96□□□□□ -0.82
CHD4-208ENST00000540960 COL4A6Q14031 1691 aa9.96□□□□□ -0.82
CHD4-208ENST00000540960 ZBTB22O15209 634 aa9.95□□□□□ -0.82
CHD4-208ENST00000540960 DCXO43602 365 aa9.95□□□□□ -0.82
CHD4-208ENST00000540960 MSCO60682 206 aa9.95□□□□□ -0.82
CHD4-208ENST00000540960 ZFYP08048 801 aaPredicted RBP9.95□□□□□ -0.82
CHD4-208ENST00000540960 IL9P15248 144 aa9.95□□□□□ -0.82
CHD4-208ENST00000540960 CSF2RAP15509 400 aa9.95□□□□□ -0.82
CHD4-208ENST00000540960 PTMSP20962 102 aa9.95□□□□□ -0.82
CHD4-208ENST00000540960 PTPN5P54829 565 aa9.95□□□□□ -0.82
CHD4-208ENST00000540960 KCTD2Q14681 263 aa9.95□□□□□ -0.82
CHD4-208ENST00000540960 SLC44A5Q8NCS7 719 aa9.95□□□□□ -0.82
CHD4-208ENST00000540960 EAF2Q96CJ1 260 aaPredicted RBP9.95□□□□□ -0.82
CHD4-208ENST00000540960 IL17RAQ96F46 866 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms