RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 PLCD1P51178 756 aa12.42□□□□□ -0.42
VPS37C-204ENST00000538036 GABPAQ06546 454 aa12.42□□□□□ -0.42
VPS37C-204ENST00000538036 ZKSCAN2Q63HK3 967 aa12.42□□□□□ -0.42
VPS37C-204ENST00000538036 MAFAQ8NHW3 353 aaPredicted RBP12.42□□□□□ -0.42
VPS37C-204ENST00000538036 EAF2Q96CJ1 260 aaPredicted RBP12.42□□□□□ -0.42
VPS37C-204ENST00000538036 TACC3Q9Y6A5 838 aa12.42□□□□□ -0.42
VPS37C-204ENST00000538036 LAMA2P24043 3122 aaKnown RBP12.41□□□□□ -0.42
VPS37C-204ENST00000538036 COBLO75128 1261 aa12.41□□□□□ -0.42
VPS37C-204ENST00000538036 BCAR3O75815 825 aa12.41□□□□□ -0.42
VPS37C-204ENST00000538036 ADCYAP1R1P41586 468 aa12.41□□□□□ -0.42
VPS37C-204ENST00000538036 SEPT2Q15019 361 aa12.41□□□□□ -0.42
VPS37C-204ENST00000538036 TTF1Q15361 905 aaPredicted RBP12.41□□□□□ -0.42
VPS37C-204ENST00000538036 TRIM60Q495X7 471 aa12.41□□□□□ -0.42
VPS37C-204ENST00000538036 C9orf50Q5SZB4 431 aa12.41□□□□□ -0.42
VPS37C-204ENST00000538036 TMEM57Q8N5G2 664 aa12.41□□□□□ -0.42
VPS37C-204ENST00000538036 BADQ92934 168 aa12.41□□□□□ -0.42
VPS37C-204ENST00000538036 RIOK1Q9BRS2 568 aaKnown RBP12.41□□□□□ -0.42
VPS37C-204ENST00000538036 CRNKL1Q9BZJ0 848 aaKnown RBP12.41□□□□□ -0.42
VPS37C-204ENST00000538036 TANGO6Q9C0B7 1094 aa12.41□□□□□ -0.42
VPS37C-204ENST00000538036 CCDC8Q9H0W5 538 aaPredicted RBP12.41□□□□□ -0.42
VPS37C-204ENST00000538036 PRDM5Q9NQX1 630 aaPredicted RBP12.41□□□□□ -0.42
VPS37C-204ENST00000538036 MAGEB6P1A0A0J9YX57 407 aa12.4□□□□□ -0.42
VPS37C-204ENST00000538036 A0A1W2PRG0 241 aa12.4□□□□□ -0.42
VPS37C-204ENST00000538036 SLC25A27O95847 323 aa12.4□□□□□ -0.42
VPS37C-204ENST00000538036 FCER1AP12319 257 aa12.4□□□□□ -0.42
VPS37C-204ENST00000538036 DSG3P32926 999 aa12.4□□□□□ -0.42
VPS37C-204ENST00000538036 LRRC41Q15345 812 aa12.4□□□□□ -0.42
VPS37C-204ENST00000538036 TMEM179Q6ZVK1 233 aa12.4□□□□□ -0.42
VPS37C-204ENST00000538036 ERC1Q8IUD2 1116 aa12.4□□□□□ -0.42
VPS37C-204ENST00000538036 SYMPKQ92797 1274 aaKnown RBP12.4□□□□□ -0.42
VPS37C-204ENST00000538036 SH2D4AQ9H788 454 aa12.4□□□□□ -0.42
VPS37C-204ENST00000538036 PDLIM7Q9NR12 457 aa12.4□□□□□ -0.42
VPS37C-204ENST00000538036 TLR7Q9NYK1 1049 aaKnown RBP12.4□□□□□ -0.42
VPS37C-204ENST00000538036 SWAP70Q9UH65 585 aa12.4□□□□□ -0.42
VPS37C-204ENST00000538036 PHF24Q9UPV7 400 aa12.4□□□□□ -0.42
VPS37C-204ENST00000538036 TNNQ9UQP3 1299 aa12.4□□□□□ -0.42
VPS37C-204ENST00000538036 CDK5RAP2Q96SN8 1893 aa12.4□□□□□ -0.42
VPS37C-204ENST00000538036 MPHOSPH10O00566 681 aaKnown RBP12.39□□□□□ -0.43
VPS37C-204ENST00000538036 MYCNP04198 464 aaPredicted RBP12.39□□□□□ -0.43
VPS37C-204ENST00000538036 TLE2Q04725 743 aa12.39□□□□□ -0.43
VPS37C-204ENST00000538036 RNF180Q86T96 592 aa12.39□□□□□ -0.43
VPS37C-204ENST00000538036 NCAPG2Q86XI2 1143 aa12.39□□□□□ -0.43
VPS37C-204ENST00000538036 MAML3Q96JK9 1138 aa12.39□□□□□ -0.43
VPS37C-204ENST00000538036 ANTXR1Q9H6X2 564 aa12.39□□□□□ -0.43
VPS37C-204ENST00000538036 ARHGEF10LQ9HCE6 1279 aa12.39□□□□□ -0.43
VPS37C-204ENST00000538036 MCM9Q9NXL9 1143 aa12.39□□□□□ -0.43
VPS37C-204ENST00000538036 DIS3Q9Y2L1 958 aaKnown RBP12.39□□□□□ -0.43
VPS37C-204ENST00000538036 TMX2Q9Y320 296 aa12.39□□□□□ -0.43
VPS37C-204ENST00000538036 TTC28Q96AY4 2481 aa12.39□□□□□ -0.43
VPS37C-204ENST00000538036 ZNF236Q9UL36 1845 aa12.39□□□□□ -0.43
VPS37C-204ENST00000538036 TRIM43BA6NCK2 446 aa12.38□□□□□ -0.43
VPS37C-204ENST00000538036 FLOT1O75955 427 aa12.38□□□□□ -0.43
VPS37C-204ENST00000538036 RARBP10826 455 aa12.38□□□□□ -0.43
VPS37C-204ENST00000538036 PLS1Q14651 629 aa12.38□□□□□ -0.43
VPS37C-204ENST00000538036 HSP90AB4PQ58FF6 505 aa12.38□□□□□ -0.43
VPS37C-204ENST00000538036 PRAMEF19Q5SWL8 479 aa12.38□□□□□ -0.43
VPS37C-204ENST00000538036 SLC9C2Q5TAH2 1124 aa12.38□□□□□ -0.43
VPS37C-204ENST00000538036 ANO1Q5XXA6 986 aa12.38□□□□□ -0.43
VPS37C-204ENST00000538036 FERMT2Q96AC1 680 aa12.38□□□□□ -0.43
VPS37C-204ENST00000538036 TRIM43Q96BQ3 446 aaPredicted RBP12.38□□□□□ -0.43
VPS37C-204ENST00000538036 CCDC17Q96LX7 622 aa12.38□□□□□ -0.43
VPS37C-204ENST00000538036 TTYH1Q9H313 450 aaPredicted RBP12.38□□□□□ -0.43
VPS37C-204ENST00000538036 XPNPEP3Q9NQH7 507 aa12.38□□□□□ -0.43
VPS37C-204ENST00000538036 FRMPD3Q5JV73 1810 aa12.38□□□□□ -0.43
VPS37C-204ENST00000538036 MYH1P12882 1939 aa12.37□□□□□ -0.43
VPS37C-204ENST00000538036 CCER2I3L3R5 266 aa12.37□□□□□ -0.43
VPS37C-204ENST00000538036 KIAA0355O15063 1070 aa12.37□□□□□ -0.43
VPS37C-204ENST00000538036 WDR46O15213 610 aaKnown RBP12.37□□□□□ -0.43
VPS37C-204ENST00000538036 CLTBP09497 229 aa12.37□□□□□ -0.43
VPS37C-204ENST00000538036 FOSL2P15408 326 aa12.37□□□□□ -0.43
VPS37C-204ENST00000538036 COPB2P35606 906 aa12.37□□□□□ -0.43
VPS37C-204ENST00000538036 FAM47AQ5JRC9 791 aa12.37□□□□□ -0.43
VPS37C-204ENST00000538036 SH3RF1Q7Z6J0 888 aa12.37□□□□□ -0.43
VPS37C-204ENST00000538036 AACSQ86V21 672 aa12.37□□□□□ -0.43
VPS37C-204ENST00000538036 FTSJ3Q8IY81 847 aaKnown RBP12.37□□□□□ -0.43
VPS37C-204ENST00000538036 MYLIPQ8WY64 445 aa12.37□□□□□ -0.43
VPS37C-204ENST00000538036 RNPC3Q96LT9 517 aaKnown RBP12.37□□□□□ -0.43
VPS37C-204ENST00000538036 TOX2Q96NM4 488 aa12.37□□□□□ -0.43
VPS37C-204ENST00000538036 TSEN34Q9BSV6 310 aaKnown RBP12.37□□□□□ -0.43
VPS37C-204ENST00000538036 VCPKMTQ9H867 229 aa12.37□□□□□ -0.43
VPS37C-204ENST00000538036 DCP1AQ9NPI6 582 aaPredicted RBP12.37□□□□□ -0.43
VPS37C-204ENST00000538036 PRDM6Q9NQX0 595 aa12.37□□□□□ -0.43
VPS37C-204ENST00000538036 ADAMTS5Q9UNA0 930 aa12.37□□□□□ -0.43
VPS37C-204ENST00000538036 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.36□□□□□ -0.43
VPS37C-204ENST00000538036 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.36□□□□□ -0.43
VPS37C-204ENST00000538036 RAG1P15918 1043 aa12.36□□□□□ -0.43
VPS37C-204ENST00000538036 PDE6AP16499 860 aa12.36□□□□□ -0.43
VPS37C-204ENST00000538036 KCTD2Q14681 263 aa12.36□□□□□ -0.43
VPS37C-204ENST00000538036 RIOX2Q8IUF8 465 aa12.36□□□□□ -0.43
VPS37C-204ENST00000538036 SIAH1Q8IUQ4 282 aa12.36□□□□□ -0.43
VPS37C-204ENST00000538036 MSL3Q8N5Y2 521 aaKnown RBP12.36□□□□□ -0.43
VPS37C-204ENST00000538036 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.36□□□□□ -0.43
VPS37C-204ENST00000538036 ATG4CQ96DT6 458 aa12.36□□□□□ -0.43
VPS37C-204ENST00000538036 MMP19Q99542 508 aa12.36□□□□□ -0.43
VPS37C-204ENST00000538036 TINF2Q9BSI4 451 aa12.36□□□□□ -0.43
VPS37C-204ENST00000538036 C1orf115Q9H7X2 142 aa12.36□□□□□ -0.43
VPS37C-204ENST00000538036 ATP8A2Q9NTI2 1148 aa12.36□□□□□ -0.43
VPS37C-204ENST00000538036 RLFQ13129 1914 aa12.36□□□□□ -0.43
VPS37C-204ENST00000538036 LTBP2Q14767 1821 aa12.36□□□□□ -0.43
VPS37C-204ENST00000538036 ROBO3Q96MS0 1386 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms