RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 USP17L10C9JJH3 530 aa21.41■■□□□ 1.02
CCDC61-201ENST00000536603 GUCY1A2P33402 732 aa21.41■■□□□ 1.02
CCDC61-201ENST00000536603 MTMR2Q13614 643 aa21.41■■□□□ 1.02
CCDC61-201ENST00000536603 SEPT2Q15019 361 aa21.41■■□□□ 1.02
CCDC61-201ENST00000536603 NECAB2Q7Z6G3 386 aa21.41■■□□□ 1.02
CCDC61-201ENST00000536603 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.41■■□□□ 1.02
CCDC61-201ENST00000536603 LOC285556D6RIA3 1793 aa21.41■■□□□ 1.02
CCDC61-201ENST00000536603 DOCK3Q8IZD9 2030 aa21.4■■□□□ 1.02
CCDC61-201ENST00000536603 CCDC171Q6TFL3 1326 aa21.4■■□□□ 1.02
CCDC61-201ENST00000536603 AKR1B1P15121 316 aa21.4■■□□□ 1.02
CCDC61-201ENST00000536603 SH3D19Q5HYK7 790 aa21.4■■□□□ 1.02
CCDC61-201ENST00000536603 CCDC17Q96LX7 622 aa21.4■■□□□ 1.02
CCDC61-201ENST00000536603 C19orf81C9J6K1 198 aa21.39■■□□□ 1.01
CCDC61-201ENST00000536603 HMGCRP04035 888 aa21.39■■□□□ 1.01
CCDC61-201ENST00000536603 TMEM179Q6ZVK1 233 aa21.39■■□□□ 1.01
CCDC61-201ENST00000536603 ASCC2Q9H1I8 757 aaPredicted RBP21.39■■□□□ 1.01
CCDC61-201ENST00000536603 PRO3102Q9H379 93 aa21.39■■□□□ 1.01
CCDC61-201ENST00000536603 MKNK2Q9HBH9 465 aa21.39■■□□□ 1.01
CCDC61-201ENST00000536603 TMOD4Q9NZQ9 345 aa21.39■■□□□ 1.01
CCDC61-201ENST00000536603 A0A1W2PPC1 479 aa21.38■■□□□ 1.01
CCDC61-201ENST00000536603 HSPD1P10809 573 aaKnown RBP21.38■■□□□ 1.01
CCDC61-201ENST00000536603 MFAP1P55081 439 aaKnown RBP21.38■■□□□ 1.01
CCDC61-201ENST00000536603 IRX3P78415 501 aaPredicted RBP21.38■■□□□ 1.01
CCDC61-201ENST00000536603 PPARAQ07869 468 aa21.38■■□□□ 1.01
CCDC61-201ENST00000536603 ACER1Q8TDN7 264 aa21.38■■□□□ 1.01
CCDC61-201ENST00000536603 CRISPLD2Q9H0B8 497 aa21.38■■□□□ 1.01
CCDC61-201ENST00000536603 HMX1Q9NP08 348 aaPredicted RBP21.38■■□□□ 1.01
CCDC61-201ENST00000536603 ROBO3Q96MS0 1386 aa21.37■■□□□ 1.01
CCDC61-201ENST00000536603 FGAP02671 866 aa21.37■■□□□ 1.01
CCDC61-201ENST00000536603 RASA1P20936 1047 aa21.37■■□□□ 1.01
CCDC61-201ENST00000536603 ALX1Q15699 326 aa21.37■■□□□ 1.01
CCDC61-201ENST00000536603 ZYXQ15942 572 aaKnown RBP21.37■■□□□ 1.01
CCDC61-201ENST00000536603 C7orf61Q8IZ16 206 aa21.37■■□□□ 1.01
CCDC61-201ENST00000536603 DIS3LQ8TF46 1054 aaKnown RBP21.37■■□□□ 1.01
CCDC61-201ENST00000536603 FEZ1Q99689 392 aa21.37■■□□□ 1.01
CCDC61-201ENST00000536603 MYH8P13535 1937 aa21.37■■□□□ 1.01
CCDC61-201ENST00000536603 RPTORQ8N122 1335 aa21.36■■□□□ 1.01
CCDC61-201ENST00000536603 PRDM1O75626 825 aa21.36■■□□□ 1.01
CCDC61-201ENST00000536603 SLC3A2P08195 630 aaKnown RBP21.36■■□□□ 1.01
CCDC61-201ENST00000536603 USP17L2Q6R6M4 530 aa21.36■■□□□ 1.01
CCDC61-201ENST00000536603 ZNF444Q8N0Y2 327 aaPredicted RBP21.36■■□□□ 1.01
CCDC61-201ENST00000536603 ANKLE1Q8NAG6 615 aa21.36■■□□□ 1.01
CCDC61-201ENST00000536603 ZNF287Q9HBT7 754 aa21.36■■□□□ 1.01
CCDC61-201ENST00000536603 EMILIN3Q9NT22 766 aa21.36■■□□□ 1.01
CCDC61-201ENST00000536603 CTDSPL2Q05D32 466 aa21.35■■□□□ 1.01
CCDC61-201ENST00000536603 PDE4BQ07343 736 aa21.35■■□□□ 1.01
CCDC61-201ENST00000536603 CLEC10AQ8IUN9 316 aa21.35■■□□□ 1.01
CCDC61-201ENST00000536603 ALPK3Q96L96 1907 aa21.35■■□□□ 1.01
CCDC61-201ENST00000536603 A0A1W2PRG0 241 aa21.34■■□□□ 1.01
CCDC61-201ENST00000536603 CYP2B6P20813 491 aa21.34■■□□□ 1.01
CCDC61-201ENST00000536603 CHMLP26374 656 aa21.34■■□□□ 1.01
CCDC61-201ENST00000536603 USP14P54578 494 aa21.34■■□□□ 1.01
CCDC61-201ENST00000536603 ICA1Q05084 483 aa21.34■■□□□ 1.01
CCDC61-201ENST00000536603 TRIM32Q13049 653 aa21.34■■□□□ 1.01
CCDC61-201ENST00000536603 SIAH1Q8IUQ4 282 aa21.34■■□□□ 1.01
CCDC61-201ENST00000536603 CCAR1Q8IX12 1150 aaKnown RBP21.34■■□□□ 1.01
CCDC61-201ENST00000536603 NBPF3Q9H094 633 aa21.34■■□□□ 1.01
CCDC61-201ENST00000536603 KIAA1683Q9H0B3 1180 aa21.34■■□□□ 1.01
CCDC61-201ENST00000536603 KANSL2Q9H9L4 492 aa21.34■■□□□ 1.01
CCDC61-201ENST00000536603 SLC17A8Q8NDX2 589 aa21.33■■□□□ 1.01
CCDC61-201ENST00000536603 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.33■■□□□ 1.01
CCDC61-201ENST00000536603 IL25Q9H293 177 aa21.33■■□□□ 1.01
CCDC61-201ENST00000536603 INCENPQ9NQS7 918 aa21.33■■□□□ 1.01
CCDC61-201ENST00000536603 ANAPC4Q9UJX5 808 aa21.33■■□□□ 1.01
CCDC61-201ENST00000536603 GJD2Q9UKL4 321 aa21.33■■□□□ 1.01
CCDC61-201ENST00000536603 ZMYND8Q9ULU4 1186 aaPredicted RBP21.33■■□□□ 1.01
CCDC61-201ENST00000536603 SOX1O00570 391 aaPredicted RBP21.32■■□□□ 1
CCDC61-201ENST00000536603 ATP2B2Q01814 1243 aa21.32■■□□□ 1
CCDC61-201ENST00000536603 RUFY2Q8WXA3 655 aa21.32■■□□□ 1
CCDC61-201ENST00000536603 LRCH3Q96II8 777 aa21.32■■□□□ 1
CCDC61-201ENST00000536603 C12orf42Q96LP6 360 aa21.32■■□□□ 1
CCDC61-201ENST00000536603 NUDT12Q9BQG2 462 aa21.32■■□□□ 1
CCDC61-201ENST00000536603 C11orf49Q9H6J7 331 aa21.32■■□□□ 1
CCDC61-201ENST00000536603 ARHGEF10LQ9HCE6 1279 aa21.32■■□□□ 1
CCDC61-201ENST00000536603 MORF4L1Q9UBU8 362 aa21.32■■□□□ 1
CCDC61-201ENST00000536603 ZMYM6O95789 1325 aa21.31■■□□□ 1
CCDC61-201ENST00000536603 EEF2P13639 858 aaKnown RBP21.31■■□□□ 1
CCDC61-201ENST00000536603 HOXA7P31268 230 aaPredicted RBP21.31■■□□□ 1
CCDC61-201ENST00000536603 GPRC5AQ8NFJ5 357 aa21.31■■□□□ 1
CCDC61-201ENST00000536603 TRIB2Q92519 343 aa21.31■■□□□ 1
CCDC61-201ENST00000536603 P2RX7Q99572 595 aaKnown RBP21.31■■□□□ 1
CCDC61-201ENST00000536603 CWC22Q9HCG8 908 aaKnown RBP21.31■■□□□ 1
CCDC61-201ENST00000536603 PLXNB2O15031 1838 aa21.3■■□□□ 1
CCDC61-201ENST00000536603 TSPY3P0CV98 308 aa21.3■■□□□ 1
CCDC61-201ENST00000536603 TSPY8P0CW00 308 aa21.3■■□□□ 1
CCDC61-201ENST00000536603 SYN1P17600 705 aa21.3■■□□□ 1
CCDC61-201ENST00000536603 HAND2P61296 217 aa21.3■■□□□ 1
CCDC61-201ENST00000536603 HERVK_113P62684 666 aa21.3■■□□□ 1
CCDC61-201ENST00000536603 FAM47AQ5JRC9 791 aa21.3■■□□□ 1
CCDC61-201ENST00000536603 DSCC1Q9BVC3 393 aa21.3■■□□□ 1
CCDC61-201ENST00000536603 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.3■■□□□ 1
CCDC61-201ENST00000536603 TMX2Q9Y320 296 aa21.3■■□□□ 1
CCDC61-201ENST00000536603 TACC3Q9Y6A5 838 aa21.3■■□□□ 1
CCDC61-201ENST00000536603 SZT2Q5T011 3432 aa21.29■■□□□ 1
CCDC61-201ENST00000536603 PEX10O60683 326 aa21.29■■□□□ 1
CCDC61-201ENST00000536603 PRKAR2AP13861 404 aaKnown RBP21.29■■□□□ 1
CCDC61-201ENST00000536603 VCAM1P19320 739 aa21.29■■□□□ 1
CCDC61-201ENST00000536603 TFAP4Q01664 338 aa21.29■■□□□ 1
CCDC61-201ENST00000536603 SOCS4Q8WXH5 440 aa21.29■■□□□ 1
CCDC61-201ENST00000536603 PAGR1Q9BTK6 254 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms