RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 TPM4P67936 248 aa24.44■■□□□ 1.5
TRIM3-214ENST00000536344 IQCA1Q86XH1 822 aa24.44■■□□□ 1.5
TRIM3-214ENST00000536344 REXO1L1PQ8IX06 675 aa24.44■■□□□ 1.5
TRIM3-214ENST00000536344 FLAD1Q8NFF5 587 aa24.44■■□□□ 1.5
TRIM3-214ENST00000536344 MASTLQ96GX5 879 aa24.44■■□□□ 1.5
TRIM3-214ENST00000536344 CAMKK2Q96RR4 588 aa24.44■■□□□ 1.5
TRIM3-214ENST00000536344 KIF23Q02241 960 aaPredicted RBP24.43■■□□□ 1.5
TRIM3-214ENST00000536344 MUM1L1Q5H9M0 696 aa24.43■■□□□ 1.5
TRIM3-214ENST00000536344 C15orf52Q6ZUT6 534 aaKnown RBP24.43■■□□□ 1.5
TRIM3-214ENST00000536344 TEX11Q8IYF3 940 aa24.43■■□□□ 1.5
TRIM3-214ENST00000536344 DUOX1Q9NRD9 1551 aa24.43■■□□□ 1.5
TRIM3-214ENST00000536344 USP17L3A6NCW0 530 aa24.43■■□□□ 1.5
TRIM3-214ENST00000536344 USP17L4A6NCW7 530 aa24.43■■□□□ 1.5
TRIM3-214ENST00000536344 CDKL5O76039 1030 aa24.43■■□□□ 1.5
TRIM3-214ENST00000536344 PTPN21Q16825 1174 aa24.43■■□□□ 1.5
TRIM3-214ENST00000536344 USP17L1Q7RTZ2 530 aa24.43■■□□□ 1.5
TRIM3-214ENST00000536344 XPO4Q9C0E2 1151 aaKnown RBP24.43■■□□□ 1.5
TRIM3-214ENST00000536344 COL11A2P13942 1736 aaPredicted RBP24.43■■□□□ 1.5
TRIM3-214ENST00000536344 KIF2AO00139 706 aaPredicted RBP24.42■■□□□ 1.5
TRIM3-214ENST00000536344 SLURP2P0DP57 97 aa24.42■■□□□ 1.5
TRIM3-214ENST00000536344 TFAP4Q01664 338 aa24.42■■□□□ 1.5
TRIM3-214ENST00000536344 FAM177A1Q8N128 213 aaPredicted RBP24.42■■□□□ 1.5
TRIM3-214ENST00000536344 ARPP21Q9UBL0 812 aaPredicted RBP24.42■■□□□ 1.5
TRIM3-214ENST00000536344 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.42■■□□□ 1.5
TRIM3-214ENST00000536344 URI1O94763 535 aaPredicted RBP24.42■■□□□ 1.5
TRIM3-214ENST00000536344 ALDH1B1P30837 517 aa24.42■■□□□ 1.5
TRIM3-214ENST00000536344 RGS22Q8NE09 1264 aa24.42■■□□□ 1.5
TRIM3-214ENST00000536344 KCND1Q9NSA2 647 aa24.42■■□□□ 1.5
TRIM3-214ENST00000536344 MKRN1Q9UHC7 482 aaKnown RBP24.42■■□□□ 1.5
TRIM3-214ENST00000536344 PCDHAC2Q9Y5I4 1007 aa24.42■■□□□ 1.5
TRIM3-214ENST00000536344 SMC2O95347 1197 aa24.41■■□□□ 1.5
TRIM3-214ENST00000536344 GSTO1P78417 241 aa24.41■■□□□ 1.5
TRIM3-214ENST00000536344 C12orf60Q5U649 245 aa24.41■■□□□ 1.5
TRIM3-214ENST00000536344 UBXN6Q9BZV1 441 aa24.41■■□□□ 1.5
TRIM3-214ENST00000536344 MKNK2Q9HBH9 465 aa24.41■■□□□ 1.5
TRIM3-214ENST00000536344 TNS1Q9HBL0 1735 aaKnown RBP24.41■■□□□ 1.5
TRIM3-214ENST00000536344 SMC1AQ14683 1233 aaKnown RBP24.41■■□□□ 1.5
TRIM3-214ENST00000536344 STK32BQ9NY57 414 aa24.41■■□□□ 1.5
TRIM3-214ENST00000536344 IFNKQ9P0W0 207 aa24.41■■□□□ 1.5
TRIM3-214ENST00000536344 H0YIN7 160 aa24.41■■□□□ 1.5
TRIM3-214ENST00000536344 RASGRP2Q7LDG7 609 aa24.41■■□□□ 1.5
TRIM3-214ENST00000536344 MARCKSP29966 332 aaPredicted RBP24.4■■□□□ 1.5
TRIM3-214ENST00000536344 PDE4BQ07343 736 aa24.4■■□□□ 1.5
TRIM3-214ENST00000536344 MYSM1Q5VVJ2 828 aa24.4■■□□□ 1.5
TRIM3-214ENST00000536344 OSBPL5Q9H0X9 879 aaPredicted RBP24.4■■□□□ 1.5
TRIM3-214ENST00000536344 TMX4Q9H1E5 349 aaPredicted RBP24.4■■□□□ 1.5
TRIM3-214ENST00000536344 ARGLU1Q9NWB6 273 aaPredicted RBP24.4■■□□□ 1.5
TRIM3-214ENST00000536344 TTF2Q9UNY4 1162 aaKnown RBP24.4■■□□□ 1.5
TRIM3-214ENST00000536344 CAVIN2O95810 425 aa24.4■■□□□ 1.5
TRIM3-214ENST00000536344 ATP2B1P20020 1258 aa24.4■■□□□ 1.5
TRIM3-214ENST00000536344 GOLGA8FQ08AF8 430 aa24.4■■□□□ 1.5
TRIM3-214ENST00000536344 GOLGA8DPQ0D2H9 430 aa24.4■■□□□ 1.5
TRIM3-214ENST00000536344 MNS1Q8NEH6 495 aa24.4■■□□□ 1.5
TRIM3-214ENST00000536344 TADA3O75528 432 aa24.39■■□□□ 1.5
TRIM3-214ENST00000536344 FMNL1O95466 1100 aaPredicted RBP24.39■■□□□ 1.5
TRIM3-214ENST00000536344 LDHCP07864 332 aa24.39■■□□□ 1.5
TRIM3-214ENST00000536344 IFNAR1P17181 557 aa24.39■■□□□ 1.5
TRIM3-214ENST00000536344 CATIPQ7Z7H3 387 aa24.39■■□□□ 1.5
TRIM3-214ENST00000536344 CRACR2BQ8N4Y2 399 aaPredicted RBP24.39■■□□□ 1.5
TRIM3-214ENST00000536344 ZNF396Q96N95 335 aaPredicted RBP24.39■■□□□ 1.5
TRIM3-214ENST00000536344 BTBD18B2RXH4 712 aa24.39■■□□□ 1.49
TRIM3-214ENST00000536344 LMAN1P49257 510 aa24.39■■□□□ 1.49
TRIM3-214ENST00000536344 ETF1P62495 437 aaKnown RBP24.39■■□□□ 1.49
TRIM3-214ENST00000536344 DAGLAQ9Y4D2 1042 aa24.39■■□□□ 1.49
TRIM3-214ENST00000536344 SLC3A2P08195 630 aaKnown RBP24.38■■□□□ 1.49
TRIM3-214ENST00000536344 GSDMDP57764 484 aa24.38■■□□□ 1.49
TRIM3-214ENST00000536344 TRIM29Q14134 588 aa24.38■■□□□ 1.49
TRIM3-214ENST00000536344 STK38Q15208 465 aa24.38■■□□□ 1.49
TRIM3-214ENST00000536344 SF3A1Q15459 793 aaKnown RBP24.38■■□□□ 1.49
TRIM3-214ENST00000536344 IL17RBQ9NRM6 502 aa24.38■■□□□ 1.49
TRIM3-214ENST00000536344 RCOR1Q9UKL0 485 aa24.38■■□□□ 1.49
TRIM3-214ENST00000536344 V9GY48 417 aaPredicted RBP24.38■■□□□ 1.49
TRIM3-214ENST00000536344 SFPQP23246 707 aaKnown RBP eCLIP24.38■■□□□ 1.49
TRIM3-214ENST00000536344 NR5A1Q13285 461 aa24.38■■□□□ 1.49
TRIM3-214ENST00000536344 TRIM22Q8IYM9 498 aa24.38■■□□□ 1.49
TRIM3-214ENST00000536344 TMTC2Q8N394 836 aa24.38■■□□□ 1.49
TRIM3-214ENST00000536344 VPS54Q9P1Q0 977 aa24.38■■□□□ 1.49
TRIM3-214ENST00000536344 VEGFAP15692 232 aaPredicted RBP24.37■■□□□ 1.49
TRIM3-214ENST00000536344 RHBDL3P58872 404 aa24.37■■□□□ 1.49
TRIM3-214ENST00000536344 TROAPQ12815 778 aa24.37■■□□□ 1.49
TRIM3-214ENST00000536344 TRIM65Q6PJ69 517 aa24.37■■□□□ 1.49
TRIM3-214ENST00000536344 PCDHA7Q9UN72 937 aa24.37■■□□□ 1.49
TRIM3-214ENST00000536344 SLX4Q8IY92 1834 aa24.37■■□□□ 1.49
TRIM3-214ENST00000536344 GPR75-ASB3A0A0A6YYF3 556 aa24.37■■□□□ 1.49
TRIM3-214ENST00000536344 A0A1B0GVL5 298 aa24.37■■□□□ 1.49
TRIM3-214ENST00000536344 FGRP09769 529 aa24.37■■□□□ 1.49
TRIM3-214ENST00000536344 CACNB3P54284 484 aa24.37■■□□□ 1.49
TRIM3-214ENST00000536344 CC2D1AQ6P1N0 951 aaPredicted RBP24.37■■□□□ 1.49
TRIM3-214ENST00000536344 KIAA0825Q8IV33 1275 aa24.37■■□□□ 1.49
TRIM3-214ENST00000536344 OXER1Q8TDS5 423 aa24.37■■□□□ 1.49
TRIM3-214ENST00000536344 SHISA4Q96DD7 197 aa24.37■■□□□ 1.49
TRIM3-214ENST00000536344 COA1Q9GZY4 146 aa24.37■■□□□ 1.49
TRIM3-214ENST00000536344 EFCC1Q9HA90 598 aa24.37■■□□□ 1.49
TRIM3-214ENST00000536344 STX8Q9UNK0 236 aa24.37■■□□□ 1.49
TRIM3-214ENST00000536344 MYH15Q9Y2K3 1946 aa24.37■■□□□ 1.49
TRIM3-214ENST00000536344 ECM29Q5VYK3 1845 aa24.37■■□□□ 1.49
TRIM3-214ENST00000536344 MAST2Q6P0Q8 1798 aa24.36■■□□□ 1.49
TRIM3-214ENST00000536344 CASQ1P31415 396 aa24.36■■□□□ 1.49
TRIM3-214ENST00000536344 DPCR1Q3MIW9 517 aa24.36■■□□□ 1.49
TRIM3-214ENST00000536344 SBK1Q52WX2 424 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms