RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 AGPSO00116 658 aa4.22□□□□□ -1.73
MCF2-210ENST00000536274 CUTAO60888 179 aa4.22□□□□□ -1.73
MCF2-210ENST00000536274 MYL1P05976 194 aa4.22□□□□□ -1.73
MCF2-210ENST00000536274 DDR1Q08345 913 aa4.22□□□□□ -1.73
MCF2-210ENST00000536274 SLC5A9Q2M3M2 681 aa4.22□□□□□ -1.73
MCF2-210ENST00000536274 SMYD5Q6GMV2 418 aa4.22□□□□□ -1.73
MCF2-210ENST00000536274 PRPF40BQ6NWY9 871 aaKnown RBP4.22□□□□□ -1.73
MCF2-210ENST00000536274 SARM1Q6SZW1 724 aa4.22□□□□□ -1.73
MCF2-210ENST00000536274 ARHGEF25Q86VW2 580 aa4.22□□□□□ -1.73
MCF2-210ENST00000536274 PALB2Q86YC2 1186 aa4.22□□□□□ -1.73
MCF2-210ENST00000536274 CCAR1Q8IX12 1150 aaKnown RBP4.22□□□□□ -1.73
MCF2-210ENST00000536274 SYCP3Q8IZU3 236 aa4.22□□□□□ -1.73
MCF2-210ENST00000536274 DRAXINQ8NBI3 349 aaPredicted RBP4.22□□□□□ -1.73
MCF2-210ENST00000536274 CPLX3Q8WVH0 158 aa4.22□□□□□ -1.73
MCF2-210ENST00000536274 IL17RAQ96F46 866 aa4.22□□□□□ -1.73
MCF2-210ENST00000536274 BAIAP2L1Q9UHR4 511 aa4.22□□□□□ -1.73
MCF2-210ENST00000536274 BLOC1S6Q9UL45 172 aa4.22□□□□□ -1.73
MCF2-210ENST00000536274 LIMCH1Q9UPQ0 1083 aa4.22□□□□□ -1.73
MCF2-210ENST00000536274 ACEP12821 1306 aa4.22□□□□□ -1.73
MCF2-210ENST00000536274 CD163L1Q9NR16 1453 aa4.22□□□□□ -1.73
MCF2-210ENST00000536274 ADAMTS7Q9UKP4 1686 aa4.21□□□□□ -1.73
MCF2-210ENST00000536274 SRGAP2O75044 1071 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 KIAA0754O94854 1291 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 FMNL1O95466 1100 aaPredicted RBP4.21□□□□□ -1.74
MCF2-210ENST00000536274 C1QTNF8P60827 252 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 GUCY1A3Q02108 690 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 DCTN1Q14203 1278 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 BRD3Q15059 726 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 SLC15A2Q16348 729 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 CFAP70Q5T0N1 1121 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 CAPRIN2Q6IMN6 1127 aaKnown RBP4.21□□□□□ -1.74
MCF2-210ENST00000536274 ARHGAP27Q6ZUM4 889 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 BZW1Q7L1Q6 419 aaKnown RBP4.21□□□□□ -1.74
MCF2-210ENST00000536274 PTF1AQ7RTS3 328 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 KRI1Q8N9T8 703 aaKnown RBP4.21□□□□□ -1.74
MCF2-210ENST00000536274 ARL8AQ96BM9 186 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 TTC14Q96N46 770 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 FAM210AQ96ND0 272 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 NUP58Q9BVL2 599 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 CAPS2Q9BXY5 557 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 NAT10Q9H0A0 1025 aaKnown RBP4.21□□□□□ -1.74
MCF2-210ENST00000536274 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.21□□□□□ -1.74
MCF2-210ENST00000536274 MAP3K19Q56UN5 1328 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 ITGB4P16144 1822 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 hCG_2014768A0A024R1R8 64 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 RBM47A0AV96 593 aaKnown RBP4.21□□□□□ -1.74
MCF2-210ENST00000536274 SHTN1A0MZ66 631 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 GOLGA6CA6NDK9 693 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 SOWAHDA6NJG2 315 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 DNM1LO00429 736 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 ENC1O14682 589 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 PPFIA2O75334 1257 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 ATP6V1G1O75348 118 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 LINGO3P0C6S8 592 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 GOLGA6DP0CG33 693 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 GNAT1P11488 350 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 TUBP50607 506 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 HDLBPQ00341 1268 aaKnown RBP4.21□□□□□ -1.74
MCF2-210ENST00000536274 SNCBQ16143 134 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 STX1AQ16623 288 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 CEP85Q6P2H3 762 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 SLC4A10Q6U841 1118 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 MIGA2Q7L4E1 593 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 C14orf80Q86SX3 495 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 PARP9Q8IXQ6 854 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 STK11IPQ8N1F8 1099 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 C8orf58Q8NAV2 365 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 NGDNQ8NEJ9 315 aaKnown RBP4.21□□□□□ -1.74
MCF2-210ENST00000536274 CAPZA3Q96KX2 299 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 CCDC114Q96M63 670 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 ZNF396Q96N95 335 aaPredicted RBP4.21□□□□□ -1.74
MCF2-210ENST00000536274 USP28Q96RU2 1077 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 OSBPL5Q9H0X9 879 aaPredicted RBP4.21□□□□□ -1.74
MCF2-210ENST00000536274 CHCHD3Q9NX63 227 aaKnown RBP4.21□□□□□ -1.74
MCF2-210ENST00000536274 GOLGA6AQ9NYA3 693 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 HDAC6Q9UBN7 1215 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 HPCAL4Q9UM19 191 aa4.21□□□□□ -1.74
MCF2-210ENST00000536274 SPDYE5A6NIY4 337 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 F6X3S4 739 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 RASSF9O75901 435 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 GCP02774 474 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 CA8P35219 290 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 GSDMDP57764 484 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 IGBP1P78318 339 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 PTH1RQ03431 593 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 CFAP100Q494V2 611 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 ZNF569Q5MCW4 686 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 CYB5D1Q6P9G0 228 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 TTLL7Q6ZT98 887 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 SRGAP1Q7Z6B7 1085 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 NCAPG2Q86XI2 1143 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 FAM76AQ8TAV0 307 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 POM121Q96HA1 1249 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 LRRCC1Q9C099 1032 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 A1CFQ9NQ94 594 aaKnown RBP4.2□□□□□ -1.74
MCF2-210ENST00000536274 DDX19AQ9NUU7 478 aaKnown RBP4.2□□□□□ -1.74
MCF2-210ENST00000536274 HYPKQ9NX55 129 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 PCDHGC5Q9Y5F6 944 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 ATP6V1DQ9Y5K8 247 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 LRRC10BA6NIK2 292 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms