RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 FBXO46Q6PJ61 603 aaPredicted RBP25.88■■□□□ 1.73
SSPN-204ENST00000535504 NEDD1Q8NHV4 660 aa25.88■■□□□ 1.73
SSPN-204ENST00000535504 WDR46O15213 610 aaKnown RBP25.87■■□□□ 1.73
SSPN-204ENST00000535504 BCRP11274 1271 aa25.87■■□□□ 1.73
SSPN-204ENST00000535504 PSMC4P43686 418 aa25.87■■□□□ 1.73
SSPN-204ENST00000535504 PRMT2P55345 433 aa25.87■■□□□ 1.73
SSPN-204ENST00000535504 HERVK_113P62684 666 aa25.87■■□□□ 1.73
SSPN-204ENST00000535504 OTOP1Q7RTM1 612 aa25.87■■□□□ 1.73
SSPN-204ENST00000535504 CLEC10AQ8IUN9 316 aa25.87■■□□□ 1.73
SSPN-204ENST00000535504 CWC22Q9HCG8 908 aaKnown RBP25.87■■□□□ 1.73
SSPN-204ENST00000535504 PLIN4Q96Q06 1357 aa25.86■■□□□ 1.73
SSPN-204ENST00000535504 A0A1W2PRG0 241 aa25.86■■□□□ 1.73
SSPN-204ENST00000535504 ORC4O43929 436 aa25.86■■□□□ 1.73
SSPN-204ENST00000535504 FAM47AQ5JRC9 791 aa25.86■■□□□ 1.73
SSPN-204ENST00000535504 AKNAD1Q5T1N1 836 aa25.86■■□□□ 1.73
SSPN-204ENST00000535504 CATSPERGQ6ZRH7 1159 aa25.86■■□□□ 1.73
SSPN-204ENST00000535504 P2RX7Q99572 595 aaKnown RBP25.86■■□□□ 1.73
SSPN-204ENST00000535504 CLIP2Q9UDT6 1046 aa25.86■■□□□ 1.73
SSPN-204ENST00000535504 ABHD8Q96I13 439 aa25.85■■□□□ 1.73
SSPN-204ENST00000535504 HOXC10Q9NYD6 342 aa25.85■■□□□ 1.73
SSPN-204ENST00000535504 SYNPO2Q9UMS6 1093 aa25.85■■□□□ 1.73
SSPN-204ENST00000535504 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.85■■□□□ 1.73
SSPN-204ENST00000535504 ECM2O94769 699 aaPredicted RBP25.84■■□□□ 1.73
SSPN-204ENST00000535504 CCNA1P78396 465 aa25.84■■□□□ 1.73
SSPN-204ENST00000535504 SPICE1Q8N0Z3 855 aa25.84■■□□□ 1.73
SSPN-204ENST00000535504 GPRC5AQ8NFJ5 357 aa25.84■■□□□ 1.73
SSPN-204ENST00000535504 STAG1Q8WVM7 1258 aa25.84■■□□□ 1.73
SSPN-204ENST00000535504 ESR2Q92731 530 aa25.84■■□□□ 1.73
SSPN-204ENST00000535504 COA7Q96BR5 231 aa25.84■■□□□ 1.73
SSPN-204ENST00000535504 CEP95Q96GE4 821 aa25.84■■□□□ 1.73
SSPN-204ENST00000535504 PAGR1Q9BTK6 254 aa25.84■■□□□ 1.73
SSPN-204ENST00000535504 MTMR4Q9NYA4 1195 aa25.84■■□□□ 1.73
SSPN-204ENST00000535504 STX8Q9UNK0 236 aa25.84■■□□□ 1.73
SSPN-204ENST00000535504 TNPO2O14787 897 aaKnown RBP25.83■■□□□ 1.73
SSPN-204ENST00000535504 SGSM2O43147 1006 aa25.83■■□□□ 1.73
SSPN-204ENST00000535504 COG2Q14746 738 aa25.83■■□□□ 1.73
SSPN-204ENST00000535504 ISY1Q9ULR0 285 aaKnown RBP25.83■■□□□ 1.73
SSPN-204ENST00000535504 U3KPZ7 1027 aaPredicted RBP25.83■■□□□ 1.73
SSPN-204ENST00000535504 FLOT1O75955 427 aa25.82■■□□□ 1.72
SSPN-204ENST00000535504 TRDNQ13061 729 aa25.82■■□□□ 1.72
SSPN-204ENST00000535504 CCDC178Q5BJE1 867 aa25.82■■□□□ 1.72
SSPN-204ENST00000535504 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.82■■□□□ 1.72
SSPN-204ENST00000535504 CNNM2Q9H8M5 875 aa25.82■■□□□ 1.72
SSPN-204ENST00000535504 RABGAP1Q9Y3P9 1069 aa25.82■■□□□ 1.72
SSPN-204ENST00000535504 GREB1LQ9C091 1923 aaPredicted RBP25.81■■□□□ 1.72
SSPN-204ENST00000535504 IGKV6D-41A0A0C4DH26 115 aa25.81■■□□□ 1.72
SSPN-204ENST00000535504 FGRP09769 529 aa25.81■■□□□ 1.72
SSPN-204ENST00000535504 SAMD1Q6SPF0 538 aaPredicted RBP25.81■■□□□ 1.72
SSPN-204ENST00000535504 SIAH1Q8IUQ4 282 aa25.81■■□□□ 1.72
SSPN-204ENST00000535504 KRT23Q9C075 422 aa25.81■■□□□ 1.72
SSPN-204ENST00000535504 PTPN22Q9Y2R2 807 aa25.81■■□□□ 1.72
SSPN-204ENST00000535504 CTDP1Q9Y5B0 961 aaPredicted RBP25.81■■□□□ 1.72
SSPN-204ENST00000535504 CDC45O75419 566 aa25.8■■□□□ 1.72
SSPN-204ENST00000535504 IQCA1Q86XH1 822 aa25.8■■□□□ 1.72
SSPN-204ENST00000535504 MB21D1Q8N884 522 aa25.8■■□□□ 1.72
SSPN-204ENST00000535504 RAET1EQ8TD07 263 aa25.8■■□□□ 1.72
SSPN-204ENST00000535504 ARHGAP39Q9C0H5 1083 aa25.8■■□□□ 1.72
SSPN-204ENST00000535504 MORF4L1Q9UBU8 362 aa25.8■■□□□ 1.72
SSPN-204ENST00000535504 MYPNQ86TC9 1320 aa25.8■■□□□ 1.72
SSPN-204ENST00000535504 MYH4Q9Y623 1939 aa25.8■■□□□ 1.72
SSPN-204ENST00000535504 CCDC85CA6NKD9 419 aa25.79■■□□□ 1.72
SSPN-204ENST00000535504 F5H6K3 240 aa25.79■■□□□ 1.72
SSPN-204ENST00000535504 KLRC3Q07444 240 aa25.79■■□□□ 1.72
SSPN-204ENST00000535504 NBPF11Q86T75 865 aa25.79■■□□□ 1.72
SSPN-204ENST00000535504 MKL1Q969V6 931 aa25.79■■□□□ 1.72
SSPN-204ENST00000535504 MAPK4P31152 587 aa25.78■■□□□ 1.72
SSPN-204ENST00000535504 ERVK-9P63128 1117 aa25.78■■□□□ 1.72
SSPN-204ENST00000535504 ERVK-24P63145 666 aa25.78■■□□□ 1.72
SSPN-204ENST00000535504 LBX2Q6XYB7 198 aa25.78■■□□□ 1.72
SSPN-204ENST00000535504 TBC1D10CQ8IV04 446 aa25.78■■□□□ 1.72
SSPN-204ENST00000535504 LRRC47Q8N1G4 583 aaKnown RBP25.78■■□□□ 1.72
SSPN-204ENST00000535504 GMCL1P1Q8NEA9 526 aa25.78■■□□□ 1.72
SSPN-204ENST00000535504 TRIM47Q96LD4 638 aa25.78■■□□□ 1.72
SSPN-204ENST00000535504 INCENPQ9NQS7 918 aa25.78■■□□□ 1.72
SSPN-204ENST00000535504 SRRDQ9UH36 339 aa25.78■■□□□ 1.72
SSPN-204ENST00000535504 HPS5Q9UPZ3 1129 aa25.78■■□□□ 1.72
SSPN-204ENST00000535504 LAMA4Q16363 1823 aa25.78■■□□□ 1.72
SSPN-204ENST00000535504 SPDYE16A6NNV3 312 aaPredicted RBP25.77■■□□□ 1.72
SSPN-204ENST00000535504 FAM83BQ5T0W9 1011 aa25.77■■□□□ 1.72
SSPN-204ENST00000535504 SKAP1Q86WV1 359 aa25.77■■□□□ 1.72
SSPN-204ENST00000535504 ESYT1Q9BSJ8 1104 aa25.77■■□□□ 1.72
SSPN-204ENST00000535504 CAPN15O75808 1086 aa25.76■■□□□ 1.71
SSPN-204ENST00000535504 NDUFB10O96000 172 aa25.76■■□□□ 1.71
SSPN-204ENST00000535504 SLC9C1Q4G0N8 1177 aa25.76■■□□□ 1.71
SSPN-204ENST00000535504 WDR78Q5VTH9 848 aa25.76■■□□□ 1.71
SSPN-204ENST00000535504 SLFN13Q68D06 897 aa25.76■■□□□ 1.71
SSPN-204ENST00000535504 ANO2Q9NQ90 1003 aa25.76■■□□□ 1.71
SSPN-204ENST00000535504 TCP11L1Q9NUJ3 509 aa25.76■■□□□ 1.71
SSPN-204ENST00000535504 DSG3P32926 999 aa25.75■■□□□ 1.71
SSPN-204ENST00000535504 IKQ13123 557 aaPredicted RBP25.75■■□□□ 1.71
SSPN-204ENST00000535504 IFFO2Q5TF58 517 aa25.75■■□□□ 1.71
SSPN-204ENST00000535504 RALYLQ86SE5 291 aaKnown RBP25.75■■□□□ 1.71
SSPN-204ENST00000535504 TTC14Q96N46 770 aa25.75■■□□□ 1.71
SSPN-204ENST00000535504 IL25Q9H293 177 aa25.75■■□□□ 1.71
SSPN-204ENST00000535504 RBPJLQ9UBG7 517 aa25.75■■□□□ 1.71
SSPN-204ENST00000535504 IVNS1ABPQ9Y6Y0 642 aa25.75■■□□□ 1.71
SSPN-204ENST00000535504 MGAMO43451 1857 aa25.74■■□□□ 1.71
SSPN-204ENST00000535504 NEDD4P46934 1319 aa25.74■■□□□ 1.71
SSPN-204ENST00000535504 TOP1P11387 765 aaKnown RBP25.74■■□□□ 1.71
SSPN-204ENST00000535504 SLC1A4P43007 532 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms