RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 ZBED3Q96IU2 234 aaPredicted RBP27.48■■□□□ 1.99
PTPMT1-205ENST00000534775 FOXP1Q9H334 677 aaPredicted RBP27.48■■□□□ 1.99
PTPMT1-205ENST00000534775 TCP10L2B9ZVM9 353 aa27.47■■□□□ 1.99
PTPMT1-205ENST00000534775 FZD9O00144 591 aa27.47■■□□□ 1.99
PTPMT1-205ENST00000534775 DEKP35659 375 aaKnown RBP27.47■■□□□ 1.99
PTPMT1-205ENST00000534775 CSRNP1Q96S65 589 aa27.47■■□□□ 1.99
PTPMT1-205ENST00000534775 MYOZ2Q9NPC6 264 aa27.47■■□□□ 1.99
PTPMT1-205ENST00000534775 HERC5Q9UII4 1024 aaKnown RBP27.47■■□□□ 1.99
PTPMT1-205ENST00000534775 ISY1Q9ULR0 285 aaKnown RBP27.47■■□□□ 1.99
PTPMT1-205ENST00000534775 SCG2P13521 617 aa27.46■■□□□ 1.99
PTPMT1-205ENST00000534775 ZNF280AP59817 542 aaPredicted RBP27.46■■□□□ 1.99
PTPMT1-205ENST00000534775 PFKFB3Q16875 520 aaPredicted RBP27.46■■□□□ 1.99
PTPMT1-205ENST00000534775 DIS3L2Q8IYB7 885 aaKnown RBP27.46■■□□□ 1.99
PTPMT1-205ENST00000534775 STAG2Q8N3U4 1231 aa27.46■■□□□ 1.99
PTPMT1-205ENST00000534775 POLR3EQ9NVU0 708 aa27.46■■□□□ 1.99
PTPMT1-205ENST00000534775 TMEM63CQ9P1W3 806 aa27.46■■□□□ 1.99
PTPMT1-205ENST00000534775 SMARCA1P28370 1054 aa27.45■■□□□ 1.99
PTPMT1-205ENST00000534775 CEBPZQ03701 1054 aaKnown RBP27.45■■□□□ 1.99
PTPMT1-205ENST00000534775 ZSCAN23Q3MJ62 389 aa27.45■■□□□ 1.99
PTPMT1-205ENST00000534775 FAM83AQ86UY5 434 aa27.45■■□□□ 1.99
PTPMT1-205ENST00000534775 KCNJ14Q9UNX9 436 aa27.45■■□□□ 1.99
PTPMT1-205ENST00000534775 MTMR7Q9Y216 660 aa27.45■■□□□ 1.99
PTPMT1-205ENST00000534775 MYH4Q9Y623 1939 aa27.45■■□□□ 1.98
PTPMT1-205ENST00000534775 YEATS4O95619 227 aa27.45■■□□□ 1.98
PTPMT1-205ENST00000534775 NOSTRINQ8IVI9 506 aa27.45■■□□□ 1.98
PTPMT1-205ENST00000534775 DPF2Q92785 391 aa27.45■■□□□ 1.98
PTPMT1-205ENST00000534775 PHF20Q9BVI0 1012 aa27.45■■□□□ 1.98
PTPMT1-205ENST00000534775 VEZTQ9HBM0 779 aa27.45■■□□□ 1.98
PTPMT1-205ENST00000534775 BRMS1Q9HCU9 246 aa27.45■■□□□ 1.98
PTPMT1-205ENST00000534775 VPS54Q9P1Q0 977 aa27.45■■□□□ 1.98
PTPMT1-205ENST00000534775 CLIP2Q9UDT6 1046 aa27.45■■□□□ 1.98
PTPMT1-205ENST00000534775 KLRF2D3W0D1 207 aa27.44■■□□□ 1.98
PTPMT1-205ENST00000534775 ZNF445P59923 1031 aa27.44■■□□□ 1.98
PTPMT1-205ENST00000534775 SPZ1Q9BXG8 430 aa27.44■■□□□ 1.98
PTPMT1-205ENST00000534775 FHDC1Q9C0D6 1143 aaPredicted RBP27.44■■□□□ 1.98
PTPMT1-205ENST00000534775 hCG_1642624A0A1W2PR95 340 aa27.43■■□□□ 1.98
PTPMT1-205ENST00000534775 NASPP49321 788 aaPredicted RBP27.43■■□□□ 1.98
PTPMT1-205ENST00000534775 ASPRV1Q53RT3 343 aa27.43■■□□□ 1.98
PTPMT1-205ENST00000534775 TMEM179Q6ZVK1 233 aa27.43■■□□□ 1.98
PTPMT1-205ENST00000534775 KCNG4Q8TDN1 519 aa27.43■■□□□ 1.98
PTPMT1-205ENST00000534775 KANSL2Q9H9L4 492 aa27.43■■□□□ 1.98
PTPMT1-205ENST00000534775 SH3GLB2Q9NR46 395 aa27.43■■□□□ 1.98
PTPMT1-205ENST00000534775 CNTNAP1P78357 1384 aa27.43■■□□□ 1.98
PTPMT1-205ENST00000534775 FAM196BA6NMK8 535 aa27.42■■□□□ 1.98
PTPMT1-205ENST00000534775 BTBD18B2RXH4 712 aa27.42■■□□□ 1.98
PTPMT1-205ENST00000534775 WNT10BO00744 389 aa27.42■■□□□ 1.98
PTPMT1-205ENST00000534775 STK38Q15208 465 aa27.42■■□□□ 1.98
PTPMT1-205ENST00000534775 FAM177A1Q8N128 213 aaPredicted RBP27.42■■□□□ 1.98
PTPMT1-205ENST00000534775 FTOQ9C0B1 505 aaKnown RBP eCLIP27.42■■□□□ 1.98
PTPMT1-205ENST00000534775 DICER1Q9UPY3 1922 aaKnown RBP27.42■■□□□ 1.98
PTPMT1-205ENST00000534775 GOLGA6L3A6NEY3 463 aa27.41■■□□□ 1.98
PTPMT1-205ENST00000534775 PDHBP11177 359 aa27.41■■□□□ 1.98
PTPMT1-205ENST00000534775 KRT2P35908 639 aa27.41■■□□□ 1.98
PTPMT1-205ENST00000534775 TNNI2P48788 182 aa27.41■■□□□ 1.98
PTPMT1-205ENST00000534775 PRELPP51888 382 aa27.41■■□□□ 1.98
PTPMT1-205ENST00000534775 ABCB5Q2M3G0 1257 aa27.41■■□□□ 1.98
PTPMT1-205ENST00000534775 CCDC183Q5T5S1 534 aa27.41■■□□□ 1.98
PTPMT1-205ENST00000534775 ANO1Q5XXA6 986 aa27.41■■□□□ 1.98
PTPMT1-205ENST00000534775 LRRC47Q8N1G4 583 aaKnown RBP27.41■■□□□ 1.98
PTPMT1-205ENST00000534775 NYAP2Q9P242 653 aa27.41■■□□□ 1.98
PTPMT1-205ENST00000534775 SNHG28P0DPA3 235 aa27.41■■□□□ 1.98
PTPMT1-205ENST00000534775 GMPSP49915 693 aaPredicted RBP27.41■■□□□ 1.98
PTPMT1-205ENST00000534775 TPRNQ4KMQ1 711 aa27.41■■□□□ 1.98
PTPMT1-205ENST00000534775 USP17L2Q6R6M4 530 aa27.41■■□□□ 1.98
PTPMT1-205ENST00000534775 LINC00301Q8NCQ3 95 aa27.41■■□□□ 1.98
PTPMT1-205ENST00000534775 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.41■■□□□ 1.98
PTPMT1-205ENST00000534775 GJA3Q9Y6H8 435 aa27.41■■□□□ 1.98
PTPMT1-205ENST00000534775 LETM1O95202 739 aaPredicted RBP27.4■■□□□ 1.98
PTPMT1-205ENST00000534775 RBM26Q5T8P6 1007 aaKnown RBP27.4■■□□□ 1.98
PTPMT1-205ENST00000534775 BICD2Q8TD16 824 aa27.4■■□□□ 1.98
PTPMT1-205ENST00000534775 PGBD1Q96JS3 809 aa27.4■■□□□ 1.98
PTPMT1-205ENST00000534775 CABP5Q9NP86 173 aa27.4■■□□□ 1.98
PTPMT1-205ENST00000534775 CLIC4Q9Y696 253 aa27.4■■□□□ 1.98
PTPMT1-205ENST00000534775 USP17L5A8MUK1 530 aa27.39■■□□□ 1.98
PTPMT1-205ENST00000534775 GOLGA8HP0CJ92 632 aa27.39■■□□□ 1.98
PTPMT1-205ENST00000534775 SLURP2P0DP57 97 aa27.39■■□□□ 1.98
PTPMT1-205ENST00000534775 CALML3P27482 149 aa27.39■■□□□ 1.98
PTPMT1-205ENST00000534775 SF3A1Q15459 793 aaKnown RBP27.39■■□□□ 1.98
PTPMT1-205ENST00000534775 NBPF9Q3BBW0 867 aa27.39■■□□□ 1.98
PTPMT1-205ENST00000534775 RILPL1Q5EBL4 403 aa27.39■■□□□ 1.98
PTPMT1-205ENST00000534775 ARHGAP27Q6ZUM4 889 aa27.39■■□□□ 1.98
PTPMT1-205ENST00000534775 MKL1Q969V6 931 aa27.39■■□□□ 1.98
PTPMT1-205ENST00000534775 LMNB1P20700 586 aa27.38■■□□□ 1.97
PTPMT1-205ENST00000534775 ME1P48163 572 aa27.38■■□□□ 1.97
PTPMT1-205ENST00000534775 ATP2B2Q01814 1243 aa27.38■■□□□ 1.97
PTPMT1-205ENST00000534775 TNFAIP1Q13829 316 aa27.38■■□□□ 1.97
PTPMT1-205ENST00000534775 L1TD1Q5T7N2 865 aaKnown RBP27.38■■□□□ 1.97
PTPMT1-205ENST00000534775 CLEC10AQ8IUN9 316 aa27.38■■□□□ 1.97
PTPMT1-205ENST00000534775 MICALL2Q8IY33 904 aa27.38■■□□□ 1.97
PTPMT1-205ENST00000534775 FSD2A1L4K1 749 aa27.38■■□□□ 1.97
PTPMT1-205ENST00000534775 SPTLC2O15270 562 aa27.38■■□□□ 1.97
PTPMT1-205ENST00000534775 CYTH3O43739 400 aa27.38■■□□□ 1.97
PTPMT1-205ENST00000534775 TBC1D12O60347 775 aa27.38■■□□□ 1.97
PTPMT1-205ENST00000534775 NLRP5P59047 1200 aa27.38■■□□□ 1.97
PTPMT1-205ENST00000534775 CCDC148Q8NFR7 591 aa27.38■■□□□ 1.97
PTPMT1-205ENST00000534775 PIBF1Q8WXW3 757 aa27.38■■□□□ 1.97
PTPMT1-205ENST00000534775 SHISA4Q96DD7 197 aa27.38■■□□□ 1.97
PTPMT1-205ENST00000534775 RRP36Q96EU6 259 aaKnown RBP27.38■■□□□ 1.97
PTPMT1-205ENST00000534775 ICA1Q05084 483 aa27.37■■□□□ 1.97
PTPMT1-205ENST00000534775 GPATCH4Q5T3I0 446 aaKnown RBP27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms