RNA–Protein interactions for RNA: ENST00000534440.5

RPS3-219, Transcript of ribosomal protein S3, humanhuman

TSL 2 BASIC

Gene RPS3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-219ENST00000534440 SYT1P21579 422 aa11.73□□□□□ -0.53
RPS3-219ENST00000534440 GUCY1A2P33402 732 aa11.73□□□□□ -0.53
RPS3-219ENST00000534440 RGS19P49795 217 aa11.73□□□□□ -0.53
RPS3-219ENST00000534440 FOXD4L5Q5VV16 416 aaPredicted RBP11.73□□□□□ -0.53
RPS3-219ENST00000534440 FOXP4Q8IVH2 680 aaPredicted RBP11.73□□□□□ -0.53
RPS3-219ENST00000534440 TMTC2Q8N394 836 aa11.73□□□□□ -0.53
RPS3-219ENST00000534440 FOXD4L4Q8WXT5 416 aaPredicted RBP11.73□□□□□ -0.53
RPS3-219ENST00000534440 TMEM47Q9BQJ4 181 aa11.73□□□□□ -0.53
RPS3-219ENST00000534440 GLIS2Q9BZE0 524 aaPredicted RBP11.73□□□□□ -0.53
RPS3-219ENST00000534440 MTMR4Q9NYA4 1195 aa11.73□□□□□ -0.53
RPS3-219ENST00000534440 MYH4Q9Y623 1939 aa11.72□□□□□ -0.53
RPS3-219ENST00000534440 ATAD5Q96QE3 1844 aa11.72□□□□□ -0.53
RPS3-219ENST00000534440 PAPPA2Q9BXP8 1791 aa11.72□□□□□ -0.53
RPS3-219ENST00000534440 THSD7BQ9C0I4 1608 aa11.72□□□□□ -0.53
RPS3-219ENST00000534440 MPHOSPH10O00566 681 aaKnown RBP11.72□□□□□ -0.53
RPS3-219ENST00000534440 CELF2O95319 508 aaKnown RBP11.72□□□□□ -0.53
RPS3-219ENST00000534440 FOSBP53539 338 aa11.72□□□□□ -0.53
RPS3-219ENST00000534440 FUT2Q10981 343 aa11.72□□□□□ -0.53
RPS3-219ENST00000534440 SLC35G1Q2M3R5 365 aa11.72□□□□□ -0.53
RPS3-219ENST00000534440 CERKLQ49MI3 558 aaPredicted RBP11.72□□□□□ -0.53
RPS3-219ENST00000534440 CDC37L1Q7L3B6 337 aa11.72□□□□□ -0.53
RPS3-219ENST00000534440 CATIPQ7Z7H3 387 aa11.72□□□□□ -0.53
RPS3-219ENST00000534440 NBPF11Q86T75 865 aa11.72□□□□□ -0.53
RPS3-219ENST00000534440 CMTR1Q8N1G2 835 aaKnown RBP11.72□□□□□ -0.53
RPS3-219ENST00000534440 LRRC47Q8N1G4 583 aaKnown RBP11.72□□□□□ -0.53
RPS3-219ENST00000534440 PNMA1Q8ND90 353 aa11.72□□□□□ -0.53
RPS3-219ENST00000534440 TNPO1Q92973 898 aaKnown RBP11.72□□□□□ -0.53
RPS3-219ENST00000534440 PHKBQ93100 1093 aa11.72□□□□□ -0.53
RPS3-219ENST00000534440 CHAMP1Q96JM3 812 aa11.72□□□□□ -0.53
RPS3-219ENST00000534440 CCDC17Q96LX7 622 aa11.72□□□□□ -0.53
RPS3-219ENST00000534440 KAT14Q9H8E8 782 aa11.72□□□□□ -0.53
RPS3-219ENST00000534440 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.72□□□□□ -0.53
RPS3-219ENST00000534440 HERC5Q9UII4 1024 aaKnown RBP11.72□□□□□ -0.53
RPS3-219ENST00000534440 TAOK2Q9UL54 1235 aa11.72□□□□□ -0.53
RPS3-219ENST00000534440 STX8Q9UNK0 236 aa11.72□□□□□ -0.53
RPS3-219ENST00000534440 MTMR6Q9Y217 621 aa11.72□□□□□ -0.53
RPS3-219ENST00000534440 CNTNAP5Q8WYK1 1306 aa11.71□□□□□ -0.53
RPS3-219ENST00000534440 TNNI2P48788 182 aa11.71□□□□□ -0.53
RPS3-219ENST00000534440 NUCB2P80303 420 aa11.71□□□□□ -0.53
RPS3-219ENST00000534440 HMGN5P82970 282 aaKnown RBP11.71□□□□□ -0.53
RPS3-219ENST00000534440 MAP3K10Q02779 954 aa11.71□□□□□ -0.53
RPS3-219ENST00000534440 TNFAIP1Q13829 316 aa11.71□□□□□ -0.53
RPS3-219ENST00000534440 GRM4Q14833 912 aa11.71□□□□□ -0.53
RPS3-219ENST00000534440 SEPT2Q15019 361 aa11.71□□□□□ -0.53
RPS3-219ENST00000534440 CCDC178Q5BJE1 867 aa11.71□□□□□ -0.53
RPS3-219ENST00000534440 PRAMEF18Q5VWM3 479 aa11.71□□□□□ -0.53
RPS3-219ENST00000534440 SYNE3Q6ZMZ3 975 aa11.71□□□□□ -0.53
RPS3-219ENST00000534440 TMTC3Q6ZXV5 915 aa11.71□□□□□ -0.53
RPS3-219ENST00000534440 MIGA2Q7L4E1 593 aa11.71□□□□□ -0.53
RPS3-219ENST00000534440 SIAH1Q8IUQ4 282 aa11.71□□□□□ -0.53
RPS3-219ENST00000534440 APOBEC3FQ8IUX4 373 aaKnown RBP11.71□□□□□ -0.53
RPS3-219ENST00000534440 FANCBQ8NB91 859 aa11.71□□□□□ -0.53
RPS3-219ENST00000534440 AIFM3Q96NN9 605 aa11.71□□□□□ -0.53
RPS3-219ENST00000534440 TRIM34Q9BYJ4 488 aa11.71□□□□□ -0.53
RPS3-219ENST00000534440 DEFB129Q9H1M3 183 aa11.71□□□□□ -0.53
RPS3-219ENST00000534440 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.71□□□□□ -0.53
RPS3-219ENST00000534440 ORC3Q9UBD5 711 aaPredicted RBP11.71□□□□□ -0.53
RPS3-219ENST00000534440 TSKSQ9UJT2 592 aa11.71□□□□□ -0.53
RPS3-219ENST00000534440 STK36Q9NRP7 1315 aa11.7□□□□□ -0.54
RPS3-219ENST00000534440 CPLX1O14810 134 aa11.7□□□□□ -0.54
RPS3-219ENST00000534440 STX6O43752 255 aa11.7□□□□□ -0.54
RPS3-219ENST00000534440 DHX16O60231 1041 aaKnown RBP11.7□□□□□ -0.54
RPS3-219ENST00000534440 TBC1D12O60347 775 aa11.7□□□□□ -0.54
RPS3-219ENST00000534440 SLC34A2O95436 690 aa11.7□□□□□ -0.54
RPS3-219ENST00000534440 GH2P01242 217 aa11.7□□□□□ -0.54
RPS3-219ENST00000534440 TOP1P11387 765 aaKnown RBP11.7□□□□□ -0.54
RPS3-219ENST00000534440 IFNAR1P17181 557 aa11.7□□□□□ -0.54
RPS3-219ENST00000534440 GRM1Q13255 1194 aa11.7□□□□□ -0.54
RPS3-219ENST00000534440 ABCB5Q2M3G0 1257 aa11.7□□□□□ -0.54
RPS3-219ENST00000534440 NBPF12Q5TAG4 269 aaPredicted RBP11.7□□□□□ -0.54
RPS3-219ENST00000534440 DLK2Q6UY11 383 aa11.7□□□□□ -0.54
RPS3-219ENST00000534440 TMEM179Q6ZVK1 233 aa11.7□□□□□ -0.54
RPS3-219ENST00000534440 PAXIP1Q6ZW49 1069 aaPredicted RBP11.7□□□□□ -0.54
RPS3-219ENST00000534440 STAG2Q8N3U4 1231 aa11.7□□□□□ -0.54
RPS3-219ENST00000534440 SRBD1Q8N5C6 995 aaKnown RBP11.7□□□□□ -0.54
RPS3-219ENST00000534440 CHMP4CQ96CF2 233 aa11.7□□□□□ -0.54
RPS3-219ENST00000534440 ZIC5Q96T25 663 aa11.7□□□□□ -0.54
RPS3-219ENST00000534440 BEGAINQ9BUH8 593 aa11.7□□□□□ -0.54
RPS3-219ENST00000534440 GJB4Q9NTQ9 266 aa11.7□□□□□ -0.54
RPS3-219ENST00000534440 DOCK1Q14185 1865 aa11.7□□□□□ -0.54
RPS3-219ENST00000534440 PITPNM2Q9BZ72 1349 aa11.69□□□□□ -0.54
RPS3-219ENST00000534440 VPS37CA5D8V6 355 aaPredicted RBP11.69□□□□□ -0.54
RPS3-219ENST00000534440 PHF20L1A8MW92 1017 aa11.69□□□□□ -0.54
RPS3-219ENST00000534440 CA12O43570 354 aa11.69□□□□□ -0.54
RPS3-219ENST00000534440 FMNL1O95466 1100 aaPredicted RBP11.69□□□□□ -0.54
RPS3-219ENST00000534440 TTLL1O95922 423 aa11.69□□□□□ -0.54
RPS3-219ENST00000534440 CALM1P0DP23 149 aa11.69□□□□□ -0.54
RPS3-219ENST00000534440 CALM2P0DP24 149 aa11.69□□□□□ -0.54
RPS3-219ENST00000534440 CALM3P0DP25 149 aa11.69□□□□□ -0.54
RPS3-219ENST00000534440 ICA1Q05084 483 aa11.69□□□□□ -0.54
RPS3-219ENST00000534440 LARP1BQ659C4 914 aaKnown RBP11.69□□□□□ -0.54
RPS3-219ENST00000534440 CCDC82Q8N4S0 544 aa11.69□□□□□ -0.54
RPS3-219ENST00000534440 SHISA4Q96DD7 197 aa11.69□□□□□ -0.54
RPS3-219ENST00000534440 SLC26A6Q9BXS9 759 aa11.69□□□□□ -0.54
RPS3-219ENST00000534440 CLIP2Q9UDT6 1046 aa11.69□□□□□ -0.54
RPS3-219ENST00000534440 MAD2L2Q9UI95 211 aa11.69□□□□□ -0.54
RPS3-219ENST00000534440 ZBTB21Q9ULJ3 1066 aa11.69□□□□□ -0.54
RPS3-219ENST00000534440 MTMR7Q9Y216 660 aa11.69□□□□□ -0.54
RPS3-219ENST00000534440 POLR2AP24928 1970 aaKnown RBP11.68□□□□□ -0.54
RPS3-219ENST00000534440 OTOFQ9HC10 1997 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms