RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 CCDC129Q6ZRS4 1044 aa36.16■■■■□ 3.38
SSSCA1-207ENST00000533115 LPAR1Q92633 364 aa36.16■■■■□ 3.38
SSSCA1-207ENST00000533115 GJD2Q9UKL4 321 aa36.16■■■■□ 3.38
SSSCA1-207ENST00000533115 TRIM6-TRIM34B2RNG4 842 aa36.15■■■■□ 3.38
SSSCA1-207ENST00000533115 EEF2P13639 858 aaKnown RBP36.15■■■■□ 3.38
SSSCA1-207ENST00000533115 GNL3Q9BVP2 549 aaKnown RBP eCLIP36.15■■■■□ 3.38
SSSCA1-207ENST00000533115 NAPBQ9H115 298 aa36.15■■■■□ 3.38
SSSCA1-207ENST00000533115 OSBPL3Q9H4L5 887 aa36.15■■■■□ 3.38
SSSCA1-207ENST00000533115 VCPKMTQ9H867 229 aa36.15■■■■□ 3.38
SSSCA1-207ENST00000533115 ZNF287Q9HBT7 754 aa36.15■■■■□ 3.38
SSSCA1-207ENST00000533115 HELLSQ9NRZ9 838 aa36.15■■■■□ 3.38
SSSCA1-207ENST00000533115 CNMDO75829 334 aa36.14■■■■□ 3.38
SSSCA1-207ENST00000533115 ELNP15502 786 aa36.14■■■■□ 3.38
SSSCA1-207ENST00000533115 MAPK4P31152 587 aa36.14■■■■□ 3.38
SSSCA1-207ENST00000533115 ATP2B2Q01814 1243 aa36.14■■■■□ 3.38
SSSCA1-207ENST00000533115 SPDYE16A6NNV3 312 aaPredicted RBP36.13■■■■□ 3.37
SSSCA1-207ENST00000533115 TANGO6Q9C0B7 1094 aa36.13■■■■□ 3.37
SSSCA1-207ENST00000533115 COG2Q14746 738 aa36.12■■■■□ 3.37
SSSCA1-207ENST00000533115 CCAR1Q8IX12 1150 aaKnown RBP36.12■■■■□ 3.37
SSSCA1-207ENST00000533115 SPICE1Q8N0Z3 855 aa36.12■■■■□ 3.37
SSSCA1-207ENST00000533115 RILPL2Q969X0 211 aa36.12■■■■□ 3.37
SSSCA1-207ENST00000533115 PORCNQ9H237 461 aa36.12■■■■□ 3.37
SSSCA1-207ENST00000533115 GREB1LQ9C091 1923 aaPredicted RBP36.12■■■■□ 3.37
SSSCA1-207ENST00000533115 FOXP2O15409 715 aa36.11■■■■□ 3.37
SSSCA1-207ENST00000533115 CCL5P13501 91 aa36.11■■■■□ 3.37
SSSCA1-207ENST00000533115 ZNF444Q8N0Y2 327 aaPredicted RBP36.11■■■■□ 3.37
SSSCA1-207ENST00000533115 HOXC10Q9NYD6 342 aa36.11■■■■□ 3.37
SSSCA1-207ENST00000533115 PRDM1O75626 825 aa36.1■■■■□ 3.37
SSSCA1-207ENST00000533115 CCNA1P78396 465 aa36.1■■■■□ 3.37
SSSCA1-207ENST00000533115 PPARAQ07869 468 aa36.1■■■■□ 3.37
SSSCA1-207ENST00000533115 FAM227BQ96M60 508 aa36.1■■■■□ 3.37
SSSCA1-207ENST00000533115 BTBD7Q9P203 1132 aa36.1■■■■□ 3.37
SSSCA1-207ENST00000533115 INHAP05111 366 aa36.09■■■■□ 3.37
SSSCA1-207ENST00000533115 SLC3A2P08195 630 aaKnown RBP36.09■■■■□ 3.37
SSSCA1-207ENST00000533115 MCMDC2Q4G0Z9 681 aa36.09■■■■□ 3.37
SSSCA1-207ENST00000533115 RNF208Q9H0X6 261 aa36.09■■■■□ 3.37
SSSCA1-207ENST00000533115 PLXNB2O15031 1838 aa36.08■■■■□ 3.37
SSSCA1-207ENST00000533115 A0A0D9SFI3 127 aa36.08■■■■□ 3.37
SSSCA1-207ENST00000533115 WDR46O15213 610 aaKnown RBP36.08■■■■□ 3.37
SSSCA1-207ENST00000533115 PDE4BQ07343 736 aa36.08■■■■□ 3.37
SSSCA1-207ENST00000533115 GPR142Q7Z601 462 aa36.08■■■■□ 3.37
SSSCA1-207ENST00000533115 NUDT12Q9BQG2 462 aa36.08■■■■□ 3.37
SSSCA1-207ENST00000533115 GOPCQ9HD26 462 aa36.08■■■■□ 3.37
SSSCA1-207ENST00000533115 VPS53Q5VIR6 699 aa36.07■■■■□ 3.36
SSSCA1-207ENST00000533115 PLEKHH3Q7Z736 793 aa36.07■■■■□ 3.36
SSSCA1-207ENST00000533115 SOCS4Q8WXH5 440 aa36.07■■■■□ 3.36
SSSCA1-207ENST00000533115 NYAP2Q9P242 653 aa36.07■■■■□ 3.36
SSSCA1-207ENST00000533115 NMIQ13287 307 aaPredicted RBP36.06■■■■□ 3.36
SSSCA1-207ENST00000533115 UNC93B1Q9H1C4 597 aa36.06■■■■□ 3.36
SSSCA1-207ENST00000533115 CWC22Q9HCG8 908 aaKnown RBP36.06■■■■□ 3.36
SSSCA1-207ENST00000533115 RLFQ13129 1914 aa36.06■■■■□ 3.36
SSSCA1-207ENST00000533115 PDE4DIPQ5VU43 2346 aa36.06■■■■□ 3.36
SSSCA1-207ENST00000533115 IGKV6D-41A0A0C4DH26 115 aa36.05■■■■□ 3.36
SSSCA1-207ENST00000533115 FLOT1O75955 427 aa36.05■■■■□ 3.36
SSSCA1-207ENST00000533115 GJB1P08034 283 aa36.05■■■■□ 3.36
SSSCA1-207ENST00000533115 DSG3P32926 999 aa36.05■■■■□ 3.36
SSSCA1-207ENST00000533115 NKX2-3Q8TAU0 364 aa36.05■■■■□ 3.36
SSSCA1-207ENST00000533115 CYP2B6P20813 491 aa36.04■■■■□ 3.36
SSSCA1-207ENST00000533115 MKI67P46013 3256 aaKnown RBP36.03■■■■□ 3.36
SSSCA1-207ENST00000533115 HMGCRP04035 888 aa36.03■■■■□ 3.36
SSSCA1-207ENST00000533115 ALX1Q15699 326 aa36.03■■■■□ 3.36
SSSCA1-207ENST00000533115 MORN1Q5T089 497 aa36.03■■■■□ 3.36
SSSCA1-207ENST00000533115 MB21D1Q8N884 522 aa36.03■■■■□ 3.36
SSSCA1-207ENST00000533115 USP6NLQ92738 828 aa36.03■■■■□ 3.36
SSSCA1-207ENST00000533115 RAD21O60216 631 aa36.02■■■■□ 3.36
SSSCA1-207ENST00000533115 XRCC5P13010 732 aaKnown RBP36.02■■■■□ 3.36
SSSCA1-207ENST00000533115 SDSP20132 328 aa36.02■■■■□ 3.36
SSSCA1-207ENST00000533115 GJA8P48165 433 aa36.02■■■■□ 3.36
SSSCA1-207ENST00000533115 CLIP2Q9UDT6 1046 aa36.02■■■■□ 3.36
SSSCA1-207ENST00000533115 A0A0G2JMZ2 1700 aa36.01■■■■□ 3.36
SSSCA1-207ENST00000533115 TSPY3P0CV98 308 aa36.01■■■■□ 3.36
SSSCA1-207ENST00000533115 TSPY8P0CW00 308 aa36.01■■■■□ 3.36
SSSCA1-207ENST00000533115 CTDSPL2Q05D32 466 aa36.01■■■■□ 3.36
SSSCA1-207ENST00000533115 WDR78Q5VTH9 848 aa36.01■■■■□ 3.36
SSSCA1-207ENST00000533115 ZNF589Q86UQ0 364 aaPredicted RBP36.01■■■■□ 3.36
SSSCA1-207ENST00000533115 NEDD1Q8NHV4 660 aa36.01■■■■□ 3.36
SSSCA1-207ENST00000533115 SHISA4Q96DD7 197 aa36.01■■■■□ 3.36
SSSCA1-207ENST00000533115 CEP95Q96GE4 821 aa36.01■■■■□ 3.36
SSSCA1-207ENST00000533115 MTMR4Q9NYA4 1195 aa36.01■■■■□ 3.36
SSSCA1-207ENST00000533115 PLIN4Q96Q06 1357 aa36.01■■■■□ 3.35
SSSCA1-207ENST00000533115 RGS2P41220 211 aa36■■■■□ 3.35
SSSCA1-207ENST00000533115 ATG4CQ96DT6 458 aa36■■■■□ 3.35
SSSCA1-207ENST00000533115 ANAPC4Q9UJX5 808 aa36■■■■□ 3.35
SSSCA1-207ENST00000533115 TFAP4Q01664 338 aa35.99■■■■□ 3.35
SSSCA1-207ENST00000533115 FAM47AQ5JRC9 791 aa35.99■■■■□ 3.35
SSSCA1-207ENST00000533115 FAM83BQ5T0W9 1011 aa35.99■■■■□ 3.35
SSSCA1-207ENST00000533115 TRIB2Q92519 343 aa35.99■■■■□ 3.35
SSSCA1-207ENST00000533115 MKL1Q969V6 931 aa35.99■■■■□ 3.35
SSSCA1-207ENST00000533115 SPATC1LQ9H0A9 340 aa35.99■■■■□ 3.35
SSSCA1-207ENST00000533115 DDX52Q9Y2R4 599 aaKnown RBP eCLIP35.99■■■■□ 3.35
SSSCA1-207ENST00000533115 CCDC171Q6TFL3 1326 aa35.99■■■■□ 3.35
SSSCA1-207ENST00000533115 F5H6K3 240 aa35.98■■■■□ 3.35
SSSCA1-207ENST00000533115 HSPD1P10809 573 aaKnown RBP35.98■■■■□ 3.35
SSSCA1-207ENST00000533115 PDE4AP27815 886 aa35.98■■■■□ 3.35
SSSCA1-207ENST00000533115 KLRC3Q07444 240 aa35.98■■■■□ 3.35
SSSCA1-207ENST00000533115 SAMD1Q6SPF0 538 aaPredicted RBP35.98■■■■□ 3.35
SSSCA1-207ENST00000533115 TRMT44Q8IYL2 757 aaKnown RBP35.98■■■■□ 3.35
SSSCA1-207ENST00000533115 U2AF1L4Q8WU68 220 aaKnown RBP35.98■■■■□ 3.35
SSSCA1-207ENST00000533115 MOV10L1Q9BXT6 1211 aaKnown RBP35.98■■■■□ 3.35
SSSCA1-207ENST00000533115 PARP14Q460N5 1801 aa35.98■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms