RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 GABPAQ06546 454 aa11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 USP17L24Q0WX57 530 aa11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 RAB3GAP1Q15042 981 aa11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 KIAA1755Q5JYT7 1200 aa11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 ERICH6BQ5W0A0 696 aa11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 MAGEB6Q8N7X4 407 aa11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 GTF3C2Q8WUA4 911 aaPredicted RBP11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 EDC3Q96F86 508 aaKnown RBP11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 TRIM34Q9BYJ4 488 aa11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 SENP6Q9GZR1 1112 aaPredicted RBP11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 DDX20Q9UHI6 824 aaKnown RBP11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 IPO8O15397 1037 aaKnown RBP11.22□□□□□ -0.61
CHMP4A-205ENST00000531158 ATN1P54259 1190 aaPredicted RBP11.22□□□□□ -0.61
CHMP4A-205ENST00000531158 ABCB5Q2M3G0 1257 aa11.22□□□□□ -0.61
CHMP4A-205ENST00000531158 GBF1Q92538 1859 aa11.22□□□□□ -0.61
CHMP4A-205ENST00000531158 LPAR1Q92633 364 aa11.22□□□□□ -0.61
CHMP4A-205ENST00000531158 FEZ1Q99689 392 aa11.22□□□□□ -0.61
CHMP4A-205ENST00000531158 RPAP3Q9H6T3 665 aaPredicted RBP11.22□□□□□ -0.61
CHMP4A-205ENST00000531158 MYH4Q9Y623 1939 aa11.21□□□□□ -0.61
CHMP4A-205ENST00000531158 SMIM22K7EJ46 135 aa11.21□□□□□ -0.61
CHMP4A-205ENST00000531158 DNM1LO00429 736 aa11.21□□□□□ -0.61
CHMP4A-205ENST00000531158 IGSF3O75054 1194 aa11.21□□□□□ -0.61
CHMP4A-205ENST00000531158 OS9Q13438 667 aaPredicted RBP11.21□□□□□ -0.61
CHMP4A-205ENST00000531158 SEPT2Q15019 361 aa11.21□□□□□ -0.61
CHMP4A-205ENST00000531158 CERKLQ49MI3 558 aaPredicted RBP11.21□□□□□ -0.61
CHMP4A-205ENST00000531158 C9orf50Q5SZB4 431 aa11.21□□□□□ -0.61
CHMP4A-205ENST00000531158 WDR78Q5VTH9 848 aa11.21□□□□□ -0.61
CHMP4A-205ENST00000531158 CLEC10AQ8IUN9 316 aa11.21□□□□□ -0.61
CHMP4A-205ENST00000531158 CCAR1Q8IX12 1150 aaKnown RBP11.21□□□□□ -0.61
CHMP4A-205ENST00000531158 LBHD1Q9BQE6 289 aaPredicted RBP11.21□□□□□ -0.61
CHMP4A-205ENST00000531158 MOV10L1Q9BXT6 1211 aaKnown RBP11.21□□□□□ -0.61
CHMP4A-205ENST00000531158 HCN4Q9Y3Q4 1203 aa11.21□□□□□ -0.61
CHMP4A-205ENST00000531158 ARIH1Q9Y4X5 557 aaPredicted RBP11.21□□□□□ -0.61
CHMP4A-205ENST00000531158 CHD9Q3L8U1 2897 aa11.2□□□□□ -0.62
CHMP4A-205ENST00000531158 COBLO75128 1261 aa11.2□□□□□ -0.62
CHMP4A-205ENST00000531158 CNGA1P29973 690 aa11.2□□□□□ -0.62
CHMP4A-205ENST00000531158 USP5P45974 858 aa11.2□□□□□ -0.62
CHMP4A-205ENST00000531158 USP14P54578 494 aa11.2□□□□□ -0.62
CHMP4A-205ENST00000531158 RTP1P59025 263 aa11.2□□□□□ -0.62
CHMP4A-205ENST00000531158 CCNA1P78396 465 aa11.2□□□□□ -0.62
CHMP4A-205ENST00000531158 GJC2Q5T442 439 aaPredicted RBP11.2□□□□□ -0.62
CHMP4A-205ENST00000531158 MFSD14CQ5VZR4 134 aa11.2□□□□□ -0.62
CHMP4A-205ENST00000531158 ANO1Q5XXA6 986 aa11.2□□□□□ -0.62
CHMP4A-205ENST00000531158 ZKSCAN2Q63HK3 967 aa11.2□□□□□ -0.62
CHMP4A-205ENST00000531158 SIAH1Q8IUQ4 282 aa11.2□□□□□ -0.62
CHMP4A-205ENST00000531158 USP38Q8NB14 1042 aa11.2□□□□□ -0.62
CHMP4A-205ENST00000531158 SLC44A5Q8NCS7 719 aa11.2□□□□□ -0.62
CHMP4A-205ENST00000531158 ADAMTS19Q8TE59 1207 aa11.2□□□□□ -0.62
CHMP4A-205ENST00000531158 C1QTNF1Q9BXJ1 281 aa11.2□□□□□ -0.62
CHMP4A-205ENST00000531158 TTYH1Q9H313 450 aaPredicted RBP11.2□□□□□ -0.62
CHMP4A-205ENST00000531158 REV3LO60673 3130 aa11.19□□□□□ -0.62
CHMP4A-205ENST00000531158 MYO9BQ13459 2157 aa11.19□□□□□ -0.62
CHMP4A-205ENST00000531158 TCRBV5S4A2TA0A5A2 114 aa11.19□□□□□ -0.62
CHMP4A-205ENST00000531158 GLRX3O76003 335 aaKnown RBP11.19□□□□□ -0.62
CHMP4A-205ENST00000531158 CYP2D6P10635 497 aa11.19□□□□□ -0.62
CHMP4A-205ENST00000531158 ADORA2AP29274 412 aa11.19□□□□□ -0.62
CHMP4A-205ENST00000531158 ATP2B2Q01814 1243 aa11.19□□□□□ -0.62
CHMP4A-205ENST00000531158 SNX17Q15036 470 aa11.19□□□□□ -0.62
CHMP4A-205ENST00000531158 SHHQ15465 462 aa11.19□□□□□ -0.62
CHMP4A-205ENST00000531158 PRAMEF19Q5SWL8 479 aa11.19□□□□□ -0.62
CHMP4A-205ENST00000531158 CEP85Q6P2H3 762 aa11.19□□□□□ -0.62
CHMP4A-205ENST00000531158 SH3RF1Q7Z6J0 888 aa11.19□□□□□ -0.62
CHMP4A-205ENST00000531158 TTC6Q86TZ1 520 aa11.19□□□□□ -0.62
CHMP4A-205ENST00000531158 ALYREFQ86V81 257 aaKnown RBP11.19□□□□□ -0.62
CHMP4A-205ENST00000531158 EXOC6BQ9Y2D4 811 aa11.19□□□□□ -0.62
CHMP4A-205ENST00000531158 MSCO60682 206 aa11.18□□□□□ -0.62
CHMP4A-205ENST00000531158 CHGBP05060 677 aa11.18□□□□□ -0.62
CHMP4A-205ENST00000531158 PDE6AP16499 860 aa11.18□□□□□ -0.62
CHMP4A-205ENST00000531158 ERCC3P19447 782 aa11.18□□□□□ -0.62
CHMP4A-205ENST00000531158 ITGB8P26012 769 aa11.18□□□□□ -0.62
CHMP4A-205ENST00000531158 TRIM60Q495X7 471 aa11.18□□□□□ -0.62
CHMP4A-205ENST00000531158 SLFNL1Q499Z3 407 aa11.18□□□□□ -0.62
CHMP4A-205ENST00000531158 OLFML2BQ68BL8 750 aa11.18□□□□□ -0.62
CHMP4A-205ENST00000531158 SLC39A5Q6ZMH5 540 aa11.18□□□□□ -0.62
CHMP4A-205ENST00000531158 LCORLQ8N3X6 602 aa11.18□□□□□ -0.62
CHMP4A-205ENST00000531158 SDR42E1Q8WUS8 393 aa11.18□□□□□ -0.62
CHMP4A-205ENST00000531158 UHRF1Q96T88 793 aaPredicted RBP11.18□□□□□ -0.62
CHMP4A-205ENST00000531158 SPATC1LQ9H0A9 340 aa11.18□□□□□ -0.62
CHMP4A-205ENST00000531158 CWC22Q9HCG8 908 aaKnown RBP11.18□□□□□ -0.62
CHMP4A-205ENST00000531158 PDLIM7Q9NR12 457 aa11.18□□□□□ -0.62
CHMP4A-205ENST00000531158 ATP11BQ9Y2G3 1177 aa11.18□□□□□ -0.62
CHMP4A-205ENST00000531158 NCOR1O75376 2440 aa11.17□□□□□ -0.62
CHMP4A-205ENST00000531158 MAGEB6P1A0A0J9YX57 407 aa11.17□□□□□ -0.62
CHMP4A-205ENST00000531158 TRIM43BA6NCK2 446 aa11.17□□□□□ -0.62
CHMP4A-205ENST00000531158 COG2Q14746 738 aa11.17□□□□□ -0.62
CHMP4A-205ENST00000531158 FAM47AQ5JRC9 791 aa11.17□□□□□ -0.62
CHMP4A-205ENST00000531158 AACSQ86V21 672 aa11.17□□□□□ -0.62
CHMP4A-205ENST00000531158 ATXN2LQ8WWM7 1075 aaKnown RBP11.17□□□□□ -0.62
CHMP4A-205ENST00000531158 TRIM43Q96BQ3 446 aaPredicted RBP11.17□□□□□ -0.62
CHMP4A-205ENST00000531158 DYNLL2Q96FJ2 89 aa11.17□□□□□ -0.62
CHMP4A-205ENST00000531158 IL1RAPL2Q9NP60 686 aa11.17□□□□□ -0.62
CHMP4A-205ENST00000531158 DCP1AQ9NPI6 582 aaPredicted RBP11.17□□□□□ -0.62
CHMP4A-205ENST00000531158 IVNS1ABPQ9Y6Y0 642 aa11.17□□□□□ -0.62
CHMP4A-205ENST00000531158 LRRC37A2A6NM11 1700 aa11.17□□□□□ -0.62
CHMP4A-205ENST00000531158 ZNF532Q9HCE3 1301 aa11.16□□□□□ -0.62
CHMP4A-205ENST00000531158 BDP1A6H8Y1 2624 aa11.16□□□□□ -0.62
CHMP4A-205ENST00000531158 LCTP09848 1927 aa11.16□□□□□ -0.62
CHMP4A-205ENST00000531158 SEPT4O43236 478 aa11.16□□□□□ -0.62
CHMP4A-205ENST00000531158 PRKAB2O43741 272 aa11.16□□□□□ -0.62
CHMP4A-205ENST00000531158 AKR1B1P15121 316 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms