RNA–Protein interactions for RNA: ENST00000530131.5

RDX-209, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 1,911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-209ENST00000530131 GPT2Q8TD30 523 aa17.7■□□□□ 0.42
RDX-209ENST00000530131 RRP1BQ14684 758 aaKnown RBP17.7■□□□□ 0.42
RDX-209ENST00000530131 CDAN1Q8IWY9 1227 aa17.7■□□□□ 0.42
RDX-209ENST00000530131 TRIM34Q9BYJ4 488 aa17.7■□□□□ 0.42
RDX-209ENST00000530131 TMEM39BQ9GZU3 492 aa17.7■□□□□ 0.42
RDX-209ENST00000530131 V9GY48 417 aaPredicted RBP17.7■□□□□ 0.42
RDX-209ENST00000530131 GNAQP50148 359 aa17.69■□□□□ 0.42
RDX-209ENST00000530131 SAMD7Q7Z3H4 446 aa17.69■□□□□ 0.42
RDX-209ENST00000530131 DDX49Q9Y6V7 483 aaKnown RBP17.69■□□□□ 0.42
RDX-209ENST00000530131 ELP1O95163 1332 aa17.69■□□□□ 0.42
RDX-209ENST00000530131 MPHOSPH10O00566 681 aaKnown RBP17.68■□□□□ 0.42
RDX-209ENST00000530131 GADD45BO75293 160 aaPredicted RBP17.68■□□□□ 0.42
RDX-209ENST00000530131 SNHG28P0DPA3 235 aa17.68■□□□□ 0.42
RDX-209ENST00000530131 JAG1P78504 1218 aa17.68■□□□□ 0.42
RDX-209ENST00000530131 PPP4R3BQ5MIZ7 849 aa17.68■□□□□ 0.42
RDX-209ENST00000530131 BRAPQ7Z569 592 aa17.68■□□□□ 0.42
RDX-209ENST00000530131 GPC2Q8N158 579 aa17.68■□□□□ 0.42
RDX-209ENST00000530131 TFIP11Q9UBB9 837 aaKnown RBP17.68■□□□□ 0.42
RDX-209ENST00000530131 CLIP2Q9UDT6 1046 aa17.68■□□□□ 0.42
RDX-209ENST00000530131 hCG_1642624A0A1W2PR95 340 aa17.68■□□□□ 0.42
RDX-209ENST00000530131 TBC1D12O60347 775 aa17.68■□□□□ 0.42
RDX-209ENST00000530131 MMP1P03956 469 aa17.68■□□□□ 0.42
RDX-209ENST00000530131 U2AF2P26368 475 aaKnown RBP eCLIP17.68■□□□□ 0.42
RDX-209ENST00000530131 AKAP17AQ02040 695 aaKnown RBP17.68■□□□□ 0.42
RDX-209ENST00000530131 TRIM29Q14134 588 aa17.68■□□□□ 0.42
RDX-209ENST00000530131 TMEM179Q6ZVK1 233 aa17.68■□□□□ 0.42
RDX-209ENST00000530131 LRRC47Q8N1G4 583 aaKnown RBP17.68■□□□□ 0.42
RDX-209ENST00000530131 SCAND2PQ9GZW5 306 aaPredicted RBP17.68■□□□□ 0.42
RDX-209ENST00000530131 NYAP2Q9P242 653 aa17.68■□□□□ 0.42
RDX-209ENST00000530131 USP17L5A8MUK1 530 aa17.67■□□□□ 0.42
RDX-209ENST00000530131 CYTH3O43739 400 aa17.67■□□□□ 0.42
RDX-209ENST00000530131 GDF11O95390 407 aa17.67■□□□□ 0.42
RDX-209ENST00000530131 PARP1P09874 1014 aaKnown RBP17.67■□□□□ 0.42
RDX-209ENST00000530131 PDHBP11177 359 aa17.67■□□□□ 0.42
RDX-209ENST00000530131 MAP3K10Q02779 954 aa17.67■□□□□ 0.42
RDX-209ENST00000530131 CSPP1Q1MSJ5 1256 aa17.67■□□□□ 0.42
RDX-209ENST00000530131 ABCB5Q2M3G0 1257 aa17.67■□□□□ 0.42
RDX-209ENST00000530131 KIF4BQ2VIQ3 1234 aa17.67■□□□□ 0.42
RDX-209ENST00000530131 TBC1D10BQ4KMP7 808 aaPredicted RBP17.67■□□□□ 0.42
RDX-209ENST00000530131 RBM26Q5T8P6 1007 aaKnown RBP17.67■□□□□ 0.42
RDX-209ENST00000530131 ATL3Q6DD88 541 aa17.67■□□□□ 0.42
RDX-209ENST00000530131 SIAH1Q8IUQ4 282 aa17.67■□□□□ 0.42
RDX-209ENST00000530131 MKL1Q969V6 931 aa17.67■□□□□ 0.42
RDX-209ENST00000530131 LZTS2Q9BRK4 669 aa17.67■□□□□ 0.42
RDX-209ENST00000530131 SPZ1Q9BXG8 430 aa17.67■□□□□ 0.42
RDX-209ENST00000530131 KANSL2Q9H9L4 492 aa17.67■□□□□ 0.42
RDX-209ENST00000530131 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.67■□□□□ 0.42
RDX-209ENST00000530131 ASTN2O75129 1339 aaPredicted RBP17.67■□□□□ 0.42
RDX-209ENST00000530131 GOLGA8HP0CJ92 632 aa17.66■□□□□ 0.42
RDX-209ENST00000530131 SEPT2Q15019 361 aa17.66■□□□□ 0.42
RDX-209ENST00000530131 PFKFB3Q16875 520 aaPredicted RBP17.66■□□□□ 0.42
RDX-209ENST00000530131 USP17L2Q6R6M4 530 aa17.66■□□□□ 0.42
RDX-209ENST00000530131 LEO1Q8WVC0 666 aaPredicted RBP17.66■□□□□ 0.42
RDX-209ENST00000530131 TEPSINQ96N21 525 aa17.66■□□□□ 0.42
RDX-209ENST00000530131 GPRC5DQ9NZD1 345 aa17.66■□□□□ 0.42
RDX-209ENST00000530131 RBM27Q9P2N5 1060 aaKnown RBP17.66■□□□□ 0.42
RDX-209ENST00000530131 KCNJ14Q9UNX9 436 aa17.66■□□□□ 0.42
RDX-209ENST00000530131 MTMR7Q9Y216 660 aa17.66■□□□□ 0.42
RDX-209ENST00000530131 UTRNP46939 3433 aa17.66■□□□□ 0.42
RDX-209ENST00000530131 KLRF2D3W0D1 207 aa17.66■□□□□ 0.42
RDX-209ENST00000530131 MBD3O95983 291 aa17.66■□□□□ 0.42
RDX-209ENST00000530131 SCG2P13521 617 aa17.66■□□□□ 0.42
RDX-209ENST00000530131 MYSM1Q5VVJ2 828 aa17.66■□□□□ 0.42
RDX-209ENST00000530131 USP28Q96RU2 1077 aa17.66■□□□□ 0.42
RDX-209ENST00000530131 PHF20Q9BVI0 1012 aa17.66■□□□□ 0.42
RDX-209ENST00000530131 EEF2P13639 858 aaKnown RBP17.65■□□□□ 0.42
RDX-209ENST00000530131 VEGFAP15692 232 aaPredicted RBP17.65■□□□□ 0.42
RDX-209ENST00000530131 SMARCA1P28370 1054 aa17.65■□□□□ 0.42
RDX-209ENST00000530131 TNNI2P48788 182 aa17.65■□□□□ 0.42
RDX-209ENST00000530131 UBE2HP62256 183 aa17.65■□□□□ 0.42
RDX-209ENST00000530131 TNFAIP1Q13829 316 aa17.65■□□□□ 0.42
RDX-209ENST00000530131 RASA3Q14644 834 aa17.65■□□□□ 0.42
RDX-209ENST00000530131 ZNF396Q96N95 335 aaPredicted RBP17.65■□□□□ 0.42
RDX-209ENST00000530131 FTOQ9C0B1 505 aaKnown RBP eCLIP17.65■□□□□ 0.42
RDX-209ENST00000530131 VPS54Q9P1Q0 977 aa17.65■□□□□ 0.42
RDX-209ENST00000530131 CFAP45Q9UL16 551 aa17.65■□□□□ 0.42
RDX-209ENST00000530131 GH2P01242 217 aa17.64■□□□□ 0.42
RDX-209ENST00000530131 ICA1Q05084 483 aa17.64■□□□□ 0.42
RDX-209ENST00000530131 NPY5RQ15761 445 aa17.64■□□□□ 0.42
RDX-209ENST00000530131 ASPRV1Q53RT3 343 aa17.64■□□□□ 0.42
RDX-209ENST00000530131 DIS3L2Q8IYB7 885 aaKnown RBP17.64■□□□□ 0.42
RDX-209ENST00000530131 SPATA32Q96LK8 384 aa17.64■□□□□ 0.42
RDX-209ENST00000530131 HACL1Q9UJ83 578 aa17.64■□□□□ 0.42
RDX-209ENST00000530131 ATAD5Q96QE3 1844 aa17.64■□□□□ 0.41
RDX-209ENST00000530131 H7C1D1 291 aa17.64■□□□□ 0.41
RDX-209ENST00000530131 TRPM4Q8TD43 1214 aa17.64■□□□□ 0.41
RDX-209ENST00000530131 FOXP1Q9H334 677 aaPredicted RBP17.64■□□□□ 0.41
RDX-209ENST00000530131 RNF181Q9P0P0 153 aa17.64■□□□□ 0.41
RDX-209ENST00000530131 RCOR1Q9UKL0 485 aa17.64■□□□□ 0.41
RDX-209ENST00000530131 SCAF8Q9UPN6 1271 aaKnown RBP17.64■□□□□ 0.41
RDX-209ENST00000530131 BTBD18B2RXH4 712 aa17.63■□□□□ 0.41
RDX-209ENST00000530131 XBP1P17861 261 aa17.63■□□□□ 0.41
RDX-209ENST00000530131 ZNF543Q08ER8 600 aa17.63■□□□□ 0.41
RDX-209ENST00000530131 NOSTRINQ8IVI9 506 aa17.63■□□□□ 0.41
RDX-209ENST00000530131 CPVLQ9H3G5 476 aa17.63■□□□□ 0.41
RDX-209ENST00000530131 RTEL1Q9NZ71 1219 aa17.63■□□□□ 0.41
RDX-209ENST00000530131 ATP2B2Q01814 1243 aa17.62■□□□□ 0.41
RDX-209ENST00000530131 SAFBQ15424 915 aaKnown RBP eCLIP17.62■□□□□ 0.41
RDX-209ENST00000530131 OXER1Q8TDS5 423 aa17.62■□□□□ 0.41
RDX-209ENST00000530131 GZF1Q9H116 711 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms