RNA–Protein interactions for RNA: ENST00000528608.5

COMMD9-205, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 988 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-205ENST00000528608 VN1R5Q7Z5H4 357 aa11.02□□□□□ -0.65
COMMD9-205ENST00000528608 MYRFLQ96LU7 910 aa11.02□□□□□ -0.65
COMMD9-205ENST00000528608 PRKRIP1Q9H875 184 aaPredicted RBP11.02□□□□□ -0.65
COMMD9-205ENST00000528608 BTAF1O14981 1849 aa11.01□□□□□ -0.65
COMMD9-205ENST00000528608 SOX1O00570 391 aaPredicted RBP11.01□□□□□ -0.65
COMMD9-205ENST00000528608 PLEKHO1Q53GL0 409 aaPredicted RBP11.01□□□□□ -0.65
COMMD9-205ENST00000528608 IFNL2Q8IZJ0 200 aa11.01□□□□□ -0.65
COMMD9-205ENST00000528608 PLSCR1O15162 318 aa11□□□□□ -0.65
COMMD9-205ENST00000528608 PREPP48147 710 aa11□□□□□ -0.65
COMMD9-205ENST00000528608 ZNF530Q6P9A1 599 aaPredicted RBP11□□□□□ -0.65
COMMD9-205ENST00000528608 SYTL4Q96C24 671 aaPredicted RBP11□□□□□ -0.65
COMMD9-205ENST00000528608 USP26Q9BXU7 913 aa11□□□□□ -0.65
COMMD9-205ENST00000528608 MYBBP1AQ9BQG0 1328 aaKnown RBP11□□□□□ -0.65
COMMD9-205ENST00000528608 U2AF1L5P0DN76 240 aaPredicted RBP10.99□□□□□ -0.65
COMMD9-205ENST00000528608 U2AF1Q01081 240 aaKnown RBP eCLIP10.99□□□□□ -0.65
COMMD9-205ENST00000528608 MTHFSDQ2M296 383 aaKnown RBP10.99□□□□□ -0.65
COMMD9-205ENST00000528608 AMOTQ4VCS5 1084 aa10.99□□□□□ -0.65
COMMD9-205ENST00000528608 PHACTR3Q96KR7 559 aa10.99□□□□□ -0.65
COMMD9-205ENST00000528608 C7orf69Q9H7B7 122 aa10.99□□□□□ -0.65
COMMD9-205ENST00000528608 ITGB4P16144 1822 aa10.99□□□□□ -0.65
COMMD9-205ENST00000528608 PLEKHG2Q9H7P9 1386 aa10.99□□□□□ -0.65
COMMD9-205ENST00000528608 RREB1Q92766 1687 aa10.98□□□□□ -0.65
COMMD9-205ENST00000528608 METTL12A8MUP2 240 aa10.98□□□□□ -0.65
COMMD9-205ENST00000528608 NDUFB5O43674 189 aa10.98□□□□□ -0.65
COMMD9-205ENST00000528608 GAS2O43903 313 aaKnown RBP10.98□□□□□ -0.65
COMMD9-205ENST00000528608 PRKAR2BP31323 418 aa10.98□□□□□ -0.65
COMMD9-205ENST00000528608 MPRIPQ6WCQ1 1025 aa10.98□□□□□ -0.65
COMMD9-205ENST00000528608 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.98□□□□□ -0.65
COMMD9-205ENST00000528608 ERICH6Q7L0X2 663 aa10.98□□□□□ -0.65
COMMD9-205ENST00000528608 TRIM42Q8IWZ5 723 aa10.98□□□□□ -0.65
COMMD9-205ENST00000528608 PIGBQ92521 554 aa10.98□□□□□ -0.65
COMMD9-205ENST00000528608 KCNF1Q9H3M0 494 aa10.98□□□□□ -0.65
COMMD9-205ENST00000528608 PCMTD2Q9NV79 361 aa10.98□□□□□ -0.65
COMMD9-205ENST00000528608 NUDCQ9Y266 331 aa10.98□□□□□ -0.65
COMMD9-205ENST00000528608 KDM6AO15550 1401 aaPredicted RBP10.98□□□□□ -0.65
COMMD9-205ENST00000528608 ESRRAP11474 423 aaPredicted RBP10.97□□□□□ -0.65
COMMD9-205ENST00000528608 BMP3P12645 472 aa10.97□□□□□ -0.65
COMMD9-205ENST00000528608 SSTR4P31391 388 aa10.97□□□□□ -0.65
COMMD9-205ENST00000528608 TXNRD1Q16881 649 aa10.97□□□□□ -0.65
COMMD9-205ENST00000528608 CCDC184Q52MB2 194 aa10.97□□□□□ -0.65
COMMD9-205ENST00000528608 FAM20CQ8IXL6 584 aa10.97□□□□□ -0.65
COMMD9-205ENST00000528608 SOX17Q9H6I2 414 aaPredicted RBP10.97□□□□□ -0.65
COMMD9-205ENST00000528608 LGR6Q9HBX8 967 aa10.97□□□□□ -0.65
COMMD9-205ENST00000528608 NUP188Q5SRE5 1749 aa10.97□□□□□ -0.65
COMMD9-205ENST00000528608 RGPD3A6NKT7 1758 aaPredicted RBP10.96□□□□□ -0.65
COMMD9-205ENST00000528608 RGPD4Q7Z3J3 1758 aa10.96□□□□□ -0.65
COMMD9-205ENST00000528608 HMX2A2RU54 273 aa10.96□□□□□ -0.65
COMMD9-205ENST00000528608 NEFLP07196 543 aa10.96□□□□□ -0.65
COMMD9-205ENST00000528608 NFIAQ12857 509 aa10.96□□□□□ -0.65
COMMD9-205ENST00000528608 AKAP4Q5JQC9 854 aa10.96□□□□□ -0.65
COMMD9-205ENST00000528608 C1orf141Q5JVX7 400 aa10.96□□□□□ -0.65
COMMD9-205ENST00000528608 GALNT12Q8IXK2 581 aa10.96□□□□□ -0.65
COMMD9-205ENST00000528608 HIF3AQ9Y2N7 669 aa10.96□□□□□ -0.65
COMMD9-205ENST00000528608 MEGF11A6BM72 1044 aa10.95□□□□□ -0.66
COMMD9-205ENST00000528608 GSTM4Q03013 218 aa10.95□□□□□ -0.66
COMMD9-205ENST00000528608 BEND4Q6ZU67 534 aa10.95□□□□□ -0.66
COMMD9-205ENST00000528608 CLEC10AQ8IUN9 316 aa10.95□□□□□ -0.66
COMMD9-205ENST00000528608 RETREG2Q8NC44 543 aa10.95□□□□□ -0.66
COMMD9-205ENST00000528608 PLEKHF1Q96S99 279 aa10.95□□□□□ -0.66
COMMD9-205ENST00000528608 LIN7BQ9HAP6 207 aa10.95□□□□□ -0.66
COMMD9-205ENST00000528608 LOC100289279A0A1B0GTE1 492 aa10.94□□□□□ -0.66
COMMD9-205ENST00000528608 A0A1W2PP55 124 aa10.94□□□□□ -0.66
COMMD9-205ENST00000528608 ERVV-2B6SEH9 535 aa10.94□□□□□ -0.66
COMMD9-205ENST00000528608 RNMTO43148 476 aaKnown RBP10.94□□□□□ -0.66
COMMD9-205ENST00000528608 TGFB1P01137 390 aa10.94□□□□□ -0.66
COMMD9-205ENST00000528608 HSP90AB1P08238 724 aaKnown RBP10.94□□□□□ -0.66
COMMD9-205ENST00000528608 ARHGAP4P98171 946 aa10.94□□□□□ -0.66
COMMD9-205ENST00000528608 ECM1Q16610 540 aa10.94□□□□□ -0.66
COMMD9-205ENST00000528608 RNF43Q68DV7 783 aa10.94□□□□□ -0.66
COMMD9-205ENST00000528608 DBNDD2Q9BQY9 259 aa10.94□□□□□ -0.66
COMMD9-205ENST00000528608 ASAP1Q9ULH1 1129 aa10.94□□□□□ -0.66
COMMD9-205ENST00000528608 SCN11AQ9UI33 1791 aa10.94□□□□□ -0.66
COMMD9-205ENST00000528608 VIRMAQ69YN4 1812 aaKnown RBP10.93□□□□□ -0.66
COMMD9-205ENST00000528608 LY75O60449 1722 aa10.93□□□□□ -0.66
COMMD9-205ENST00000528608 PDE4CQ08493 712 aa10.93□□□□□ -0.66
COMMD9-205ENST00000528608 R3HDM1Q15032 1099 aaKnown RBP10.93□□□□□ -0.66
COMMD9-205ENST00000528608 CCNJLQ8IV13 435 aa10.93□□□□□ -0.66
COMMD9-205ENST00000528608 IL17REQ8NFR9 667 aa10.93□□□□□ -0.66
COMMD9-205ENST00000528608 FAM83CQ9BQN1 747 aa10.93□□□□□ -0.66
COMMD9-205ENST00000528608 CYP4F12Q9HCS2 524 aa10.93□□□□□ -0.66
COMMD9-205ENST00000528608 ATG3Q9NT62 314 aa10.93□□□□□ -0.66
COMMD9-205ENST00000528608 TMOD3Q9NYL9 352 aa10.93□□□□□ -0.66
COMMD9-205ENST00000528608 ADAMTS7Q9UKP4 1686 aa10.92□□□□□ -0.66
COMMD9-205ENST00000528608 A0A096LPE4 126 aa10.92□□□□□ -0.66
COMMD9-205ENST00000528608 A0A1W2PPZ6 126 aa10.92□□□□□ -0.66
COMMD9-205ENST00000528608 EIF4EBP3O60516 100 aaPredicted RBP10.92□□□□□ -0.66
COMMD9-205ENST00000528608 USPL1Q5W0Q7 1092 aa10.92□□□□□ -0.66
COMMD9-205ENST00000528608 ZDHHC13Q8IUH4 622 aa10.92□□□□□ -0.66
COMMD9-205ENST00000528608 C12orf50Q8NA57 414 aaPredicted RBP10.92□□□□□ -0.66
COMMD9-205ENST00000528608 TMPRSS13Q9BYE2 586 aa10.92□□□□□ -0.66
COMMD9-205ENST00000528608 PALLDQ8WX93 1383 aa10.91□□□□□ -0.66
COMMD9-205ENST00000528608 GNAT3A8MTJ3 354 aa10.91□□□□□ -0.66
COMMD9-205ENST00000528608 ANP32CO43423 234 aa10.91□□□□□ -0.66
COMMD9-205ENST00000528608 COBLO75128 1261 aa10.91□□□□□ -0.66
COMMD9-205ENST00000528608 CD97P48960 835 aa10.91□□□□□ -0.66
COMMD9-205ENST00000528608 PCDH1Q08174 1060 aa10.91□□□□□ -0.66
COMMD9-205ENST00000528608 TCF12Q99081 682 aa10.91□□□□□ -0.66
COMMD9-205ENST00000528608 CLEC4MQ9H2X3 399 aaPredicted RBP10.91□□□□□ -0.66
COMMD9-205ENST00000528608 SLC52A2Q9HAB3 445 aa10.91□□□□□ -0.66
COMMD9-205ENST00000528608 CCNL1Q9UK58 526 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms