RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 MTFR1Q15390 333 aa39.43■■■■□ 3.9
SSSCA1-205ENST00000527920 Q3C1V9 767 aa39.43■■■■□ 3.9
SSSCA1-205ENST00000527920 PLEKHM2Q8IWE5 1019 aa39.43■■■■□ 3.9
SSSCA1-205ENST00000527920 NAPBQ9H115 298 aa39.43■■■■□ 3.9
SSSCA1-205ENST00000527920 TNRC18O15417 2968 aaPredicted RBP39.43■■■■□ 3.9
SSSCA1-205ENST00000527920 DOCK3Q8IZD9 2030 aa39.43■■■■□ 3.9
SSSCA1-205ENST00000527920 PEX10O60683 326 aa39.42■■■■□ 3.9
SSSCA1-205ENST00000527920 CNMDO75829 334 aa39.42■■■■□ 3.9
SSSCA1-205ENST00000527920 EEF2P13639 858 aaKnown RBP39.42■■■■□ 3.9
SSSCA1-205ENST00000527920 CCNA1P78396 465 aa39.42■■■■□ 3.9
SSSCA1-205ENST00000527920 COG2Q14746 738 aa39.42■■■■□ 3.9
SSSCA1-205ENST00000527920 SOCS4Q8WXH5 440 aa39.42■■■■□ 3.9
SSSCA1-205ENST00000527920 HOXC10Q9NYD6 342 aa39.42■■■■□ 3.9
SSSCA1-205ENST00000527920 GREB1LQ9C091 1923 aaPredicted RBP39.42■■■■□ 3.9
SSSCA1-205ENST00000527920 MYCP01106 439 aaPredicted RBP39.41■■■■□ 3.9
SSSCA1-205ENST00000527920 KIAA1755Q5JYT7 1200 aa39.41■■■■□ 3.9
SSSCA1-205ENST00000527920 CCL5P13501 91 aa39.4■■■■□ 3.9
SSSCA1-205ENST00000527920 ELNP15502 786 aa39.4■■■■□ 3.9
SSSCA1-205ENST00000527920 TANGO6Q9C0B7 1094 aa39.4■■■■□ 3.9
SSSCA1-205ENST00000527920 PORCNQ9H237 461 aa39.4■■■■□ 3.9
SSSCA1-205ENST00000527920 WDR46O15213 610 aaKnown RBP39.39■■■■□ 3.9
SSSCA1-205ENST00000527920 FOXP2O15409 715 aa39.39■■■■□ 3.9
SSSCA1-205ENST00000527920 SLC3A2P08195 630 aaKnown RBP39.39■■■■□ 3.9
SSSCA1-205ENST00000527920 CCAR1Q8IX12 1150 aaKnown RBP39.39■■■■□ 3.9
SSSCA1-205ENST00000527920 NKX2-3Q8TAU0 364 aa39.39■■■■□ 3.9
SSSCA1-205ENST00000527920 INHAP05111 366 aa39.38■■■■□ 3.89
SSSCA1-205ENST00000527920 GJB1P08034 283 aa39.38■■■■□ 3.89
SSSCA1-205ENST00000527920 CCDC129Q6ZRS4 1044 aa39.38■■■■□ 3.89
SSSCA1-205ENST00000527920 NUDT12Q9BQG2 462 aa39.38■■■■□ 3.89
SSSCA1-205ENST00000527920 GOPCQ9HD26 462 aa39.38■■■■□ 3.89
SSSCA1-205ENST00000527920 NYAP2Q9P242 653 aa39.38■■■■□ 3.89
SSSCA1-205ENST00000527920 XRCC5P13010 732 aaKnown RBP39.37■■■■□ 3.89
SSSCA1-205ENST00000527920 PPARAQ07869 468 aa39.37■■■■□ 3.89
SSSCA1-205ENST00000527920 GPR142Q7Z601 462 aa39.37■■■■□ 3.89
SSSCA1-205ENST00000527920 ZNF444Q8N0Y2 327 aaPredicted RBP39.37■■■■□ 3.89
SSSCA1-205ENST00000527920 MB21D1Q8N884 522 aa39.37■■■■□ 3.89
SSSCA1-205ENST00000527920 BTBD7Q9P203 1132 aa39.37■■■■□ 3.89
SSSCA1-205ENST00000527920 TRIM6-TRIM34B2RNG4 842 aa39.36■■■■□ 3.89
SSSCA1-205ENST00000527920 PDE4BQ07343 736 aa39.36■■■■□ 3.89
SSSCA1-205ENST00000527920 PLEKHH3Q7Z736 793 aa39.36■■■■□ 3.89
SSSCA1-205ENST00000527920 SPICE1Q8N0Z3 855 aa39.36■■■■□ 3.89
SSSCA1-205ENST00000527920 RNF208Q9H0X6 261 aa39.36■■■■□ 3.89
SSSCA1-205ENST00000527920 PLIN4Q96Q06 1357 aa39.35■■■■□ 3.89
SSSCA1-205ENST00000527920 IGKV6D-41A0A0C4DH26 115 aa39.35■■■■□ 3.89
SSSCA1-205ENST00000527920 HMGCRP04035 888 aa39.35■■■■□ 3.89
SSSCA1-205ENST00000527920 ATP2B2Q01814 1243 aa39.35■■■■□ 3.89
SSSCA1-205ENST00000527920 ALX1Q15699 326 aa39.35■■■■□ 3.89
SSSCA1-205ENST00000527920 MCMDC2Q4G0Z9 681 aa39.35■■■■□ 3.89
SSSCA1-205ENST00000527920 STK11IPQ8N1F8 1099 aa39.35■■■■□ 3.89
SSSCA1-205ENST00000527920 USP6NLQ92738 828 aa39.35■■■■□ 3.89
SSSCA1-205ENST00000527920 FAM227BQ96M60 508 aa39.35■■■■□ 3.89
SSSCA1-205ENST00000527920 A0A0D9SFI3 127 aa39.34■■■■□ 3.89
SSSCA1-205ENST00000527920 GJA8P48165 433 aa39.34■■■■□ 3.89
SSSCA1-205ENST00000527920 MORN1Q5T089 497 aa39.34■■■■□ 3.89
SSSCA1-205ENST00000527920 SYNPO2Q9UMS6 1093 aa39.34■■■■□ 3.89
SSSCA1-205ENST00000527920 MKI67P46013 3256 aaKnown RBP39.33■■■■□ 3.89
SSSCA1-205ENST00000527920 PRDM1O75626 825 aa39.33■■■■□ 3.89
SSSCA1-205ENST00000527920 CAPN2P17655 700 aa39.33■■■■□ 3.89
SSSCA1-205ENST00000527920 DSG3P32926 999 aa39.33■■■■□ 3.89
SSSCA1-205ENST00000527920 UNC93B1Q9H1C4 597 aa39.33■■■■□ 3.89
SSSCA1-205ENST00000527920 PLXNB2O15031 1838 aa39.33■■■■□ 3.89
SSSCA1-205ENST00000527920 FLOT1O75955 427 aa39.32■■■■□ 3.89
SSSCA1-205ENST00000527920 TRMT44Q8IYL2 757 aaKnown RBP39.32■■■■□ 3.89
SSSCA1-205ENST00000527920 RILPL2Q969X0 211 aa39.32■■■■□ 3.89
SSSCA1-205ENST00000527920 ANAPC4Q9UJX5 808 aa39.32■■■■□ 3.89
SSSCA1-205ENST00000527920 RLFQ13129 1914 aa39.32■■■■□ 3.88
SSSCA1-205ENST00000527920 A0A0G2JMZ2 1700 aa39.31■■■■□ 3.88
SSSCA1-205ENST00000527920 VPS53Q5VIR6 699 aa39.31■■■■□ 3.88
SSSCA1-205ENST00000527920 SHISA4Q96DD7 197 aa39.31■■■■□ 3.88
SSSCA1-205ENST00000527920 NMIQ13287 307 aaPredicted RBP39.3■■■■□ 3.88
SSSCA1-205ENST00000527920 NEDD1Q8NHV4 660 aa39.3■■■■□ 3.88
SSSCA1-205ENST00000527920 CWC22Q9HCG8 908 aaKnown RBP39.3■■■■□ 3.88
SSSCA1-205ENST00000527920 ZMYM6O95789 1325 aa39.3■■■■□ 3.88
SSSCA1-205ENST00000527920 RGS2P41220 211 aa39.29■■■■□ 3.88
SSSCA1-205ENST00000527920 MKL1Q969V6 931 aa39.29■■■■□ 3.88
SSSCA1-205ENST00000527920 PAK6Q9NQU5 681 aaPredicted RBP39.29■■■■□ 3.88
SSSCA1-205ENST00000527920 MTMR4Q9NYA4 1195 aa39.29■■■■□ 3.88
SSSCA1-205ENST00000527920 DDX52Q9Y2R4 599 aaKnown RBP eCLIP39.29■■■■□ 3.88
SSSCA1-205ENST00000527920 SLC15A5A6NIM6 579 aa39.28■■■■□ 3.88
SSSCA1-205ENST00000527920 CYP2B6P20813 491 aa39.28■■■■□ 3.88
SSSCA1-205ENST00000527920 IRX6P78412 446 aaPredicted RBP39.28■■■■□ 3.88
SSSCA1-205ENST00000527920 SHCBP1Q8NEM2 672 aa39.28■■■■□ 3.88
SSSCA1-205ENST00000527920 APBA2Q99767 749 aa39.28■■■■□ 3.88
SSSCA1-205ENST00000527920 SPATC1LQ9H0A9 340 aa39.28■■■■□ 3.88
SSSCA1-205ENST00000527920 ADAMTS5Q9UNA0 930 aa39.28■■■■□ 3.88
SSSCA1-205ENST00000527920 SDSP20132 328 aa39.27■■■■□ 3.88
SSSCA1-205ENST00000527920 U2AF1L4Q8WU68 220 aaKnown RBP39.27■■■■□ 3.88
SSSCA1-205ENST00000527920 TRIB2Q92519 343 aa39.27■■■■□ 3.88
SSSCA1-205ENST00000527920 ATG4CQ96DT6 458 aa39.27■■■■□ 3.88
SSSCA1-205ENST00000527920 CEP95Q96GE4 821 aa39.27■■■■□ 3.88
SSSCA1-205ENST00000527920 CCDC171Q6TFL3 1326 aa39.26■■■■□ 3.88
SSSCA1-205ENST00000527920 TSPY3P0CV98 308 aa39.26■■■■□ 3.88
SSSCA1-205ENST00000527920 TSPY8P0CW00 308 aa39.26■■■■□ 3.88
SSSCA1-205ENST00000527920 PTPREP23469 700 aa39.26■■■■□ 3.88
SSSCA1-205ENST00000527920 MFAP1P55081 439 aaKnown RBP39.26■■■■□ 3.88
SSSCA1-205ENST00000527920 MAP2K5Q13163 448 aa39.26■■■■□ 3.88
SSSCA1-205ENST00000527920 ZNF589Q86UQ0 364 aaPredicted RBP39.26■■■■□ 3.88
SSSCA1-205ENST00000527920 MOV10L1Q9BXT6 1211 aaKnown RBP39.26■■■■□ 3.88
SSSCA1-205ENST00000527920 IVNS1ABPQ9Y6Y0 642 aa39.26■■■■□ 3.88
SSSCA1-205ENST00000527920 TTLL1O95922 423 aa39.25■■■■□ 3.87
Retrieved 100 of 20,778 RNA–protein pairs in 208.7 ms