RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 PFKFB3Q16875 520 aaPredicted RBP18.65■□□□□ 0.58
SNRNP35-204ENST00000527158 FSIP1Q8NA03 581 aa18.65■□□□□ 0.58
SNRNP35-204ENST00000527158 EHD4Q9H223 541 aa18.65■□□□□ 0.58
SNRNP35-204ENST00000527158 PCDHAC2Q9Y5I4 1007 aa18.65■□□□□ 0.58
SNRNP35-204ENST00000527158 PLIN4Q96Q06 1357 aa18.65■□□□□ 0.58
SNRNP35-204ENST00000527158 PPP6R2O75170 966 aa18.65■□□□□ 0.58
SNRNP35-204ENST00000527158 CCDC192P0DO97 292 aa18.65■□□□□ 0.58
SNRNP35-204ENST00000527158 NOVP48745 357 aa18.65■□□□□ 0.58
SNRNP35-204ENST00000527158 STAG2Q8N3U4 1231 aa18.65■□□□□ 0.58
SNRNP35-204ENST00000527158 MTMR7Q9Y216 660 aa18.65■□□□□ 0.58
SNRNP35-204ENST00000527158 CACNB3P54284 484 aa18.64■□□□□ 0.57
SNRNP35-204ENST00000527158 TCP10Q12799 353 aa18.64■□□□□ 0.57
SNRNP35-204ENST00000527158 NR5A1Q13285 461 aa18.64■□□□□ 0.57
SNRNP35-204ENST00000527158 CFAP100Q494V2 611 aa18.64■□□□□ 0.57
SNRNP35-204ENST00000527158 GLIPR1L2Q4G1C9 344 aa18.64■□□□□ 0.57
SNRNP35-204ENST00000527158 RSBN1LQ6PCB5 846 aaPredicted RBP18.64■□□□□ 0.57
SNRNP35-204ENST00000527158 GOLPH3LQ9H4A5 285 aa18.64■□□□□ 0.57
SNRNP35-204ENST00000527158 MTMR4Q9NYA4 1195 aa18.64■□□□□ 0.57
SNRNP35-204ENST00000527158 ADAMTSL1Q8N6G6 1762 aa18.64■□□□□ 0.57
SNRNP35-204ENST00000527158 PALM3A6NDB9 673 aaPredicted RBP18.64■□□□□ 0.57
SNRNP35-204ENST00000527158 KINO60870 393 aaKnown RBP18.64■□□□□ 0.57
SNRNP35-204ENST00000527158 RNF214Q8ND24 703 aa18.64■□□□□ 0.57
SNRNP35-204ENST00000527158 OXER1Q8TDS5 423 aa18.64■□□□□ 0.57
SNRNP35-204ENST00000527158 PIBF1Q8WXW3 757 aa18.64■□□□□ 0.57
SNRNP35-204ENST00000527158 PI4KBQ9UBF8 816 aa18.64■□□□□ 0.57
SNRNP35-204ENST00000527158 CTAGE5O15320 804 aa18.63■□□□□ 0.57
SNRNP35-204ENST00000527158 RAD17O75943 681 aa18.63■□□□□ 0.57
SNRNP35-204ENST00000527158 PARP1P09874 1014 aaKnown RBP18.63■□□□□ 0.57
SNRNP35-204ENST00000527158 AKR1B1P15121 316 aa18.63■□□□□ 0.57
SNRNP35-204ENST00000527158 PTPAQ15257 358 aa18.63■□□□□ 0.57
SNRNP35-204ENST00000527158 DALRD3Q5D0E6 543 aaKnown RBP18.63■□□□□ 0.57
SNRNP35-204ENST00000527158 ZSCAN29Q8IWY8 852 aaPredicted RBP18.63■□□□□ 0.57
SNRNP35-204ENST00000527158 ZFPM1Q8IX07 1006 aa18.63■□□□□ 0.57
SNRNP35-204ENST00000527158 UBE2Q2Q8WVN8 375 aa18.63■□□□□ 0.57
SNRNP35-204ENST00000527158 FUCA2Q9BTY2 467 aa18.63■□□□□ 0.57
SNRNP35-204ENST00000527158 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.63■□□□□ 0.57
SNRNP35-204ENST00000527158 HDAC9Q9UKV0 1011 aa18.63■□□□□ 0.57
SNRNP35-204ENST00000527158 KIF13BQ9NQT8 1826 aa18.63■□□□□ 0.57
SNRNP35-204ENST00000527158 MYH6P13533 1939 aa18.63■□□□□ 0.57
SNRNP35-204ENST00000527158 VIL1P09327 827 aaKnown RBP18.62■□□□□ 0.57
SNRNP35-204ENST00000527158 MARCKSP29966 332 aaPredicted RBP18.62■□□□□ 0.57
SNRNP35-204ENST00000527158 SHMT1P34896 483 aa18.62■□□□□ 0.57
SNRNP35-204ENST00000527158 NLRP5P59047 1200 aa18.62■□□□□ 0.57
SNRNP35-204ENST00000527158 SNW1Q13573 536 aaKnown RBP18.62■□□□□ 0.57
SNRNP35-204ENST00000527158 PPP4R3BQ5MIZ7 849 aa18.62■□□□□ 0.57
SNRNP35-204ENST00000527158 NIM1KQ8IY84 436 aa18.62■□□□□ 0.57
SNRNP35-204ENST00000527158 ENGASEQ8NFI3 743 aa18.62■□□□□ 0.57
SNRNP35-204ENST00000527158 SHISA4Q96DD7 197 aa18.62■□□□□ 0.57
SNRNP35-204ENST00000527158 CCDC17Q96LX7 622 aa18.62■□□□□ 0.57
SNRNP35-204ENST00000527158 TRIM34Q9BYJ4 488 aa18.62■□□□□ 0.57
SNRNP35-204ENST00000527158 CABP5Q9NP86 173 aa18.62■□□□□ 0.57
SNRNP35-204ENST00000527158 SH3GLB2Q9NR46 395 aa18.62■□□□□ 0.57
SNRNP35-204ENST00000527158 FAM198AQ9UFP1 575 aa18.62■□□□□ 0.57
SNRNP35-204ENST00000527158 KLRF2D3W0D1 207 aa18.62■□□□□ 0.57
SNRNP35-204ENST00000527158 CMA1P23946 247 aa18.62■□□□□ 0.57
SNRNP35-204ENST00000527158 HSP90AA2PQ14568 343 aaPredicted RBP18.62■□□□□ 0.57
SNRNP35-204ENST00000527158 RBM43Q6ZSC3 357 aaKnown RBP18.62■□□□□ 0.57
SNRNP35-204ENST00000527158 CKAP2LQ8IYA6 745 aa18.62■□□□□ 0.57
SNRNP35-204ENST00000527158 OGFOD1Q8N543 542 aa18.62■□□□□ 0.57
SNRNP35-204ENST00000527158 TDRD3Q9H7E2 651 aaKnown RBP18.62■□□□□ 0.57
SNRNP35-204ENST00000527158 ZNRF3Q9ULT6 936 aa18.62■□□□□ 0.57
SNRNP35-204ENST00000527158 CEP131Q9UPN4 1083 aa18.62■□□□□ 0.57
SNRNP35-204ENST00000527158 PSMD14O00487 310 aa18.61■□□□□ 0.57
SNRNP35-204ENST00000527158 TTLL1O95922 423 aa18.61■□□□□ 0.57
SNRNP35-204ENST00000527158 CALML3P27482 149 aa18.61■□□□□ 0.57
SNRNP35-204ENST00000527158 TOB1P50616 345 aaPredicted RBP18.61■□□□□ 0.57
SNRNP35-204ENST00000527158 AXDND1Q5T1B0 1012 aaPredicted RBP18.61■□□□□ 0.57
SNRNP35-204ENST00000527158 PPP1R1BQ9UD71 204 aaPredicted RBP18.61■□□□□ 0.57
SNRNP35-204ENST00000527158 ZNF646O15015 1829 aaPredicted RBP18.61■□□□□ 0.57
SNRNP35-204ENST00000527158 IGKV6D-41A0A0C4DH26 115 aa18.61■□□□□ 0.57
SNRNP35-204ENST00000527158 A0A1B0GVL5 298 aa18.61■□□□□ 0.57
SNRNP35-204ENST00000527158 MPHOSPH10O00566 681 aaKnown RBP18.61■□□□□ 0.57
SNRNP35-204ENST00000527158 FOXP4Q8IVH2 680 aaPredicted RBP18.61■□□□□ 0.57
SNRNP35-204ENST00000527158 PRMT6Q96LA8 375 aaPredicted RBP18.61■□□□□ 0.57
SNRNP35-204ENST00000527158 DDTLA6NHG4 134 aaPredicted RBP18.6■□□□□ 0.57
SNRNP35-204ENST00000527158 ENTPD3O75355 529 aa18.6■□□□□ 0.57
SNRNP35-204ENST00000527158 GOLGA8HP0CJ92 632 aa18.6■□□□□ 0.57
SNRNP35-204ENST00000527158 SMARCA1P28370 1054 aa18.6■□□□□ 0.57
SNRNP35-204ENST00000527158 SASS6Q6UVJ0 657 aa18.6■□□□□ 0.57
SNRNP35-204ENST00000527158 FMR1NBQ8N0W7 255 aaPredicted RBP18.6■□□□□ 0.57
SNRNP35-204ENST00000527158 SPZ1Q9BXG8 430 aa18.6■□□□□ 0.57
SNRNP35-204ENST00000527158 TMOD2Q9NZR1 351 aa18.6■□□□□ 0.57
SNRNP35-204ENST00000527158 CLIP2Q9UDT6 1046 aa18.6■□□□□ 0.57
SNRNP35-204ENST00000527158 CUTAO60888 179 aa18.59■□□□□ 0.57
SNRNP35-204ENST00000527158 NDUFA8P51970 172 aa18.59■□□□□ 0.57
SNRNP35-204ENST00000527158 R3HDM1Q15032 1099 aaKnown RBP18.59■□□□□ 0.57
SNRNP35-204ENST00000527158 USP17L2Q6R6M4 530 aa18.59■□□□□ 0.57
SNRNP35-204ENST00000527158 PRKCSHP14314 528 aaPredicted RBP18.59■□□□□ 0.57
SNRNP35-204ENST00000527158 TYRO3Q06418 890 aa18.59■□□□□ 0.57
SNRNP35-204ENST00000527158 KRI1Q8N9T8 703 aaKnown RBP18.59■□□□□ 0.57
SNRNP35-204ENST00000527158 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.59■□□□□ 0.57
SNRNP35-204ENST00000527158 CYTH3O43739 400 aa18.58■□□□□ 0.57
SNRNP35-204ENST00000527158 PTMAP06454 111 aaKnown RBP18.58■□□□□ 0.57
SNRNP35-204ENST00000527158 ATP2B1P20020 1258 aa18.58■□□□□ 0.57
SNRNP35-204ENST00000527158 EIF6P56537 245 aaKnown RBP18.58■□□□□ 0.57
SNRNP35-204ENST00000527158 DLGAP5Q15398 846 aa18.58■□□□□ 0.57
SNRNP35-204ENST00000527158 FAM177A1Q8N128 213 aaPredicted RBP18.58■□□□□ 0.57
SNRNP35-204ENST00000527158 CCDC148Q8NFR7 591 aa18.58■□□□□ 0.57
SNRNP35-204ENST00000527158 GMLQ99445 158 aa18.58■□□□□ 0.57
SNRNP35-204ENST00000527158 PCDHB6Q9Y5E3 794 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms