RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 PKN1Q16512 942 aa23.74■■□□□ 1.39
SMCO4-203ENST00000526869 ABCB5Q2M3G0 1257 aa23.74■■□□□ 1.39
SMCO4-203ENST00000526869 KLHL40Q2TBA0 621 aa23.74■■□□□ 1.39
SMCO4-203ENST00000526869 KIF4BQ2VIQ3 1234 aa23.74■■□□□ 1.39
SMCO4-203ENST00000526869 FOXD4L6Q3SYB3 417 aaPredicted RBP23.74■■□□□ 1.39
SMCO4-203ENST00000526869 FOXD4L3Q6VB84 417 aaPredicted RBP23.74■■□□□ 1.39
SMCO4-203ENST00000526869 FAM177A1Q8N128 213 aaPredicted RBP23.74■■□□□ 1.39
SMCO4-203ENST00000526869 CMTR1Q8N1G2 835 aaKnown RBP23.74■■□□□ 1.39
SMCO4-203ENST00000526869 ZNF396Q96N95 335 aaPredicted RBP23.74■■□□□ 1.39
SMCO4-203ENST00000526869 SPZ1Q9BXG8 430 aa23.74■■□□□ 1.39
SMCO4-203ENST00000526869 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.74■■□□□ 1.39
SMCO4-203ENST00000526869 GPRC5DQ9NZD1 345 aa23.74■■□□□ 1.39
SMCO4-203ENST00000526869 ELP1O95163 1332 aa23.74■■□□□ 1.39
SMCO4-203ENST00000526869 TCHHQ07283 1943 aa23.73■■□□□ 1.39
SMCO4-203ENST00000526869 FAM196BA6NMK8 535 aa23.73■■□□□ 1.39
SMCO4-203ENST00000526869 MBD3O95983 291 aa23.73■■□□□ 1.39
SMCO4-203ENST00000526869 NCLP19338 710 aaKnown RBP23.73■■□□□ 1.39
SMCO4-203ENST00000526869 GUCY1A2P33402 732 aa23.73■■□□□ 1.39
SMCO4-203ENST00000526869 ASPRV1Q53RT3 343 aa23.73■■□□□ 1.39
SMCO4-203ENST00000526869 OTUD7BQ6GQQ9 843 aa23.73■■□□□ 1.39
SMCO4-203ENST00000526869 USP48Q86UV5 1035 aa23.73■■□□□ 1.39
SMCO4-203ENST00000526869 CCDC82Q8N4S0 544 aa23.73■■□□□ 1.39
SMCO4-203ENST00000526869 CLIP2Q9UDT6 1046 aa23.73■■□□□ 1.39
SMCO4-203ENST00000526869 CFAP45Q9UL16 551 aa23.73■■□□□ 1.39
SMCO4-203ENST00000526869 V9GY48 417 aaPredicted RBP23.73■■□□□ 1.39
SMCO4-203ENST00000526869 SAFBQ15424 915 aaKnown RBP eCLIP23.72■■□□□ 1.39
SMCO4-203ENST00000526869 RBM26Q5T8P6 1007 aaKnown RBP23.72■■□□□ 1.39
SMCO4-203ENST00000526869 CABP5Q9NP86 173 aa23.72■■□□□ 1.39
SMCO4-203ENST00000526869 MYH4Q9Y623 1939 aa23.72■■□□□ 1.39
SMCO4-203ENST00000526869 EGFRP00533 1210 aa23.71■■□□□ 1.39
SMCO4-203ENST00000526869 MMP1P03956 469 aa23.71■■□□□ 1.39
SMCO4-203ENST00000526869 PDHBP11177 359 aa23.71■■□□□ 1.39
SMCO4-203ENST00000526869 U2AF2P26368 475 aaKnown RBP eCLIP23.71■■□□□ 1.39
SMCO4-203ENST00000526869 PFKFB3Q16875 520 aaPredicted RBP23.71■■□□□ 1.39
SMCO4-203ENST00000526869 TBC1D10BQ4KMP7 808 aaPredicted RBP23.71■■□□□ 1.39
SMCO4-203ENST00000526869 SAMD7Q7Z3H4 446 aa23.71■■□□□ 1.39
SMCO4-203ENST00000526869 STAG2Q8N3U4 1231 aa23.71■■□□□ 1.39
SMCO4-203ENST00000526869 TMEM39BQ9GZU3 492 aa23.71■■□□□ 1.39
SMCO4-203ENST00000526869 RNF181Q9P0P0 153 aa23.71■■□□□ 1.39
SMCO4-203ENST00000526869 KLRF2D3W0D1 207 aa23.7■■□□□ 1.38
SMCO4-203ENST00000526869 UBE2Q2LH0YL09 131 aa23.7■■□□□ 1.38
SMCO4-203ENST00000526869 FIBPO43427 364 aa23.7■■□□□ 1.38
SMCO4-203ENST00000526869 SLURP2P0DP57 97 aa23.7■■□□□ 1.38
SMCO4-203ENST00000526869 SCG2P13521 617 aa23.7■■□□□ 1.38
SMCO4-203ENST00000526869 RASA3Q14644 834 aa23.7■■□□□ 1.38
SMCO4-203ENST00000526869 FAM173BQ6P4H8 233 aa23.7■■□□□ 1.38
SMCO4-203ENST00000526869 APOBEC3FQ8IUX4 373 aaKnown RBP23.7■■□□□ 1.38
SMCO4-203ENST00000526869 GJB4Q9NTQ9 266 aa23.7■■□□□ 1.38
SMCO4-203ENST00000526869 DDX49Q9Y6V7 483 aaKnown RBP23.7■■□□□ 1.38
SMCO4-203ENST00000526869 ICA1Q05084 483 aa23.69■■□□□ 1.38
SMCO4-203ENST00000526869 LRRC47Q8N1G4 583 aaKnown RBP23.69■■□□□ 1.38
SMCO4-203ENST00000526869 FOXP1Q9H334 677 aaPredicted RBP23.69■■□□□ 1.38
SMCO4-203ENST00000526869 SH3GLB2Q9NR46 395 aa23.69■■□□□ 1.38
SMCO4-203ENST00000526869 HACL1Q9UJ83 578 aa23.69■■□□□ 1.38
SMCO4-203ENST00000526869 USP17L5A8MUK1 530 aa23.68■■□□□ 1.38
SMCO4-203ENST00000526869 EEF2P13639 858 aaKnown RBP23.68■■□□□ 1.38
SMCO4-203ENST00000526869 UBE2HP62256 183 aa23.68■■□□□ 1.38
SMCO4-203ENST00000526869 SEPT2Q15019 361 aa23.68■■□□□ 1.38
SMCO4-203ENST00000526869 GPATCH4Q5T3I0 446 aaKnown RBP23.68■■□□□ 1.38
SMCO4-203ENST00000526869 CLEC10AQ8IUN9 316 aa23.68■■□□□ 1.38
SMCO4-203ENST00000526869 LEO1Q8WVC0 666 aaPredicted RBP23.68■■□□□ 1.38
SMCO4-203ENST00000526869 TEPSINQ96N21 525 aa23.68■■□□□ 1.38
SMCO4-203ENST00000526869 PHF20Q9BVI0 1012 aa23.68■■□□□ 1.38
SMCO4-203ENST00000526869 GDPD2Q9HCC8 539 aa23.68■■□□□ 1.38
SMCO4-203ENST00000526869 GINM1Q9NU53 330 aa23.68■■□□□ 1.38
SMCO4-203ENST00000526869 ZC3H4Q9UPT8 1303 aaKnown RBP23.67■■□□□ 1.38
SMCO4-203ENST00000526869 KIF28PB7ZC32 967 aa23.67■■□□□ 1.38
SMCO4-203ENST00000526869 GDF11O95390 407 aa23.67■■□□□ 1.38
SMCO4-203ENST00000526869 GH2P01242 217 aa23.67■■□□□ 1.38
SMCO4-203ENST00000526869 ZNF543Q08ER8 600 aa23.67■■□□□ 1.38
SMCO4-203ENST00000526869 RRP1BQ14684 758 aaKnown RBP23.67■■□□□ 1.38
SMCO4-203ENST00000526869 MYSM1Q5VVJ2 828 aa23.67■■□□□ 1.38
SMCO4-203ENST00000526869 USP17L2Q6R6M4 530 aa23.67■■□□□ 1.38
SMCO4-203ENST00000526869 DCAF4Q8WV16 495 aa23.67■■□□□ 1.38
SMCO4-203ENST00000526869 HOOK2Q96ED9 719 aa23.67■■□□□ 1.38
SMCO4-203ENST00000526869 GNL2Q13823 731 aaKnown RBP23.66■■□□□ 1.38
SMCO4-203ENST00000526869 SLC35G1Q2M3R5 365 aa23.66■■□□□ 1.38
SMCO4-203ENST00000526869 C9orf131Q5VYM1 1079 aa23.66■■□□□ 1.38
SMCO4-203ENST00000526869 SIAH1Q8IUQ4 282 aa23.66■■□□□ 1.38
SMCO4-203ENST00000526869 DIS3L2Q8IYB7 885 aaKnown RBP23.66■■□□□ 1.38
SMCO4-203ENST00000526869 GMCL1P1Q8NEA9 526 aa23.66■■□□□ 1.38
SMCO4-203ENST00000526869 SPATA32Q96LK8 384 aa23.66■■□□□ 1.38
SMCO4-203ENST00000526869 RIOX1Q9H6W3 641 aa23.66■■□□□ 1.38
SMCO4-203ENST00000526869 RCOR1Q9UKL0 485 aa23.66■■□□□ 1.38
SMCO4-203ENST00000526869 PPP2R3BQ9Y5P8 575 aa23.66■■□□□ 1.38
SMCO4-203ENST00000526869 CYTH3O43739 400 aa23.65■■□□□ 1.38
SMCO4-203ENST00000526869 NOSTRINQ8IVI9 506 aa23.65■■□□□ 1.38
SMCO4-203ENST00000526869 GPT2Q8TD30 523 aa23.65■■□□□ 1.38
SMCO4-203ENST00000526869 BRMS1Q9HCU9 246 aa23.65■■□□□ 1.38
SMCO4-203ENST00000526869 RTEL1Q9NZ71 1219 aa23.65■■□□□ 1.38
SMCO4-203ENST00000526869 VPS54Q9P1Q0 977 aa23.65■■□□□ 1.38
SMCO4-203ENST00000526869 TFIP11Q9UBB9 837 aaKnown RBP23.65■■□□□ 1.38
SMCO4-203ENST00000526869 ZBTB21Q9ULJ3 1066 aa23.65■■□□□ 1.38
SMCO4-203ENST00000526869 PITPNM2Q9BZ72 1349 aa23.64■■□□□ 1.38
SMCO4-203ENST00000526869 hCG_1984214I3L0E3 225 aa23.64■■□□□ 1.37
SMCO4-203ENST00000526869 GOLGA8HP0CJ92 632 aa23.64■■□□□ 1.37
SMCO4-203ENST00000526869 CALML3P27482 149 aa23.64■■□□□ 1.37
SMCO4-203ENST00000526869 LMOD1P29536 600 aaPredicted RBP23.64■■□□□ 1.37
SMCO4-203ENST00000526869 CAP2P40123 477 aa23.64■■□□□ 1.37
SMCO4-203ENST00000526869 JAG1P78504 1218 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms