RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 USP17L24Q0WX57 530 aa14.61□□□□□ -0.07
CHKA-203ENST00000525155 NUDT12Q9BQG2 462 aa14.61□□□□□ -0.07
CHKA-203ENST00000525155 HTATIP2Q9BUP3 242 aa14.61□□□□□ -0.07
CHKA-203ENST00000525155 HMX1Q9NP08 348 aaPredicted RBP14.61□□□□□ -0.07
CHKA-203ENST00000525155 FLRT1Q9NZU1 646 aa14.61□□□□□ -0.07
CHKA-203ENST00000525155 OGDHLQ9ULD0 1010 aa14.61□□□□□ -0.07
CHKA-203ENST00000525155 RABGAP1Q9Y3P9 1069 aa14.61□□□□□ -0.07
CHKA-203ENST00000525155 PLXNB2O15031 1838 aa14.6□□□□□ -0.07
CHKA-203ENST00000525155 POLR3DP05423 398 aaPredicted RBP14.6□□□□□ -0.07
CHKA-203ENST00000525155 CCND3P30281 292 aaPredicted RBP14.6□□□□□ -0.07
CHKA-203ENST00000525155 TTC22Q5TAA0 569 aa14.6□□□□□ -0.07
CHKA-203ENST00000525155 LBX2Q6XYB7 198 aa14.6□□□□□ -0.07
CHKA-203ENST00000525155 PLEKHH3Q7Z736 793 aa14.6□□□□□ -0.07
CHKA-203ENST00000525155 RILPL2Q969X0 211 aa14.6□□□□□ -0.07
CHKA-203ENST00000525155 MCM9Q9NXL9 1143 aa14.6□□□□□ -0.07
CHKA-203ENST00000525155 CDK5RAP2Q96SN8 1893 aa14.6□□□□□ -0.07
CHKA-203ENST00000525155 SPDYE16A6NNV3 312 aaPredicted RBP14.59□□□□□ -0.07
CHKA-203ENST00000525155 PRKAR2AP13861 404 aaKnown RBP14.59□□□□□ -0.07
CHKA-203ENST00000525155 MAPK4P31152 587 aa14.59□□□□□ -0.07
CHKA-203ENST00000525155 NECAB2Q7Z6G3 386 aa14.59□□□□□ -0.07
CHKA-203ENST00000525155 CLEC10AQ8IUN9 316 aa14.59□□□□□ -0.07
CHKA-203ENST00000525155 NPLOC4Q8TAT6 608 aa14.59□□□□□ -0.07
CHKA-203ENST00000525155 APPBP2Q92624 585 aa14.59□□□□□ -0.07
CHKA-203ENST00000525155 CRNKL1Q9BZJ0 848 aaKnown RBP14.59□□□□□ -0.07
CHKA-203ENST00000525155 RPAP3Q9H6T3 665 aaPredicted RBP14.59□□□□□ -0.07
CHKA-203ENST00000525155 MAST2Q6P0Q8 1798 aa14.58□□□□□ -0.08
CHKA-203ENST00000525155 ATAD5Q96QE3 1844 aa14.58□□□□□ -0.08
CHKA-203ENST00000525155 AKR1B1P15121 316 aa14.58□□□□□ -0.08
CHKA-203ENST00000525155 DDRGK1Q96HY6 314 aa14.58□□□□□ -0.08
CHKA-203ENST00000525155 NR2E3Q9Y5X4 410 aa14.58□□□□□ -0.08
CHKA-203ENST00000525155 PFASO15067 1338 aa14.58□□□□□ -0.08
CHKA-203ENST00000525155 FOCADQ5VW36 1801 aa14.57□□□□□ -0.08
CHKA-203ENST00000525155 SOX1O00570 391 aaPredicted RBP14.57□□□□□ -0.08
CHKA-203ENST00000525155 EVI5O60447 810 aa14.57□□□□□ -0.08
CHKA-203ENST00000525155 MBD4O95243 580 aa14.57□□□□□ -0.08
CHKA-203ENST00000525155 COL6A1P12109 1028 aa14.57□□□□□ -0.08
CHKA-203ENST00000525155 CAPN2P17655 700 aa14.57□□□□□ -0.08
CHKA-203ENST00000525155 GNAT2P19087 354 aa14.57□□□□□ -0.08
CHKA-203ENST00000525155 PTPREP23469 700 aa14.57□□□□□ -0.08
CHKA-203ENST00000525155 USP14P54578 494 aa14.57□□□□□ -0.08
CHKA-203ENST00000525155 MFAP1P55081 439 aaKnown RBP14.57□□□□□ -0.08
CHKA-203ENST00000525155 MAP2K5Q13163 448 aa14.57□□□□□ -0.08
CHKA-203ENST00000525155 C12orf60Q5U649 245 aa14.57□□□□□ -0.08
CHKA-203ENST00000525155 ANKLE1Q8NAG6 615 aa14.57□□□□□ -0.08
CHKA-203ENST00000525155 TRPV1Q8NER1 839 aa14.57□□□□□ -0.08
CHKA-203ENST00000525155 SOCS4Q8WXH5 440 aa14.57□□□□□ -0.08
CHKA-203ENST00000525155 FEZ1Q99689 392 aa14.57□□□□□ -0.08
CHKA-203ENST00000525155 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.57□□□□□ -0.08
CHKA-203ENST00000525155 PUS7LQ9H0K6 701 aaKnown RBP14.57□□□□□ -0.08
CHKA-203ENST00000525155 CABP5Q9NP86 173 aa14.57□□□□□ -0.08
CHKA-203ENST00000525155 USP17L12C9JPN9 530 aa14.56□□□□□ -0.08
CHKA-203ENST00000525155 USP17L21D6R901 530 aa14.56□□□□□ -0.08
CHKA-203ENST00000525155 RGS2P41220 211 aa14.56□□□□□ -0.08
CHKA-203ENST00000525155 ZMYM1Q5SVZ6 1142 aa14.56□□□□□ -0.08
CHKA-203ENST00000525155 GTF3C2Q8WUA4 911 aaPredicted RBP14.56□□□□□ -0.08
CHKA-203ENST00000525155 GDF15Q99988 308 aa14.56□□□□□ -0.08
CHKA-203ENST00000525155 MOV10L1Q9BXT6 1211 aaKnown RBP14.56□□□□□ -0.08
CHKA-203ENST00000525155 NBPF3Q9H094 633 aa14.56□□□□□ -0.08
CHKA-203ENST00000525155 HELLSQ9NRZ9 838 aa14.56□□□□□ -0.08
CHKA-203ENST00000525155 ATP8A2Q9NTI2 1148 aa14.56□□□□□ -0.08
CHKA-203ENST00000525155 ZMYND8Q9ULU4 1186 aaPredicted RBP14.56□□□□□ -0.08
CHKA-203ENST00000525155 MPHOSPH10O00566 681 aaKnown RBP14.55□□□□□ -0.08
CHKA-203ENST00000525155 COBLO75128 1261 aa14.55□□□□□ -0.08
CHKA-203ENST00000525155 HOXC6P09630 235 aa14.55□□□□□ -0.08
CHKA-203ENST00000525155 ZKSCAN1P17029 563 aaPredicted RBP14.55□□□□□ -0.08
CHKA-203ENST00000525155 SDSP20132 328 aa14.55□□□□□ -0.08
CHKA-203ENST00000525155 CDK8P49336 464 aa14.55□□□□□ -0.08
CHKA-203ENST00000525155 GRB14Q14449 540 aa14.55□□□□□ -0.08
CHKA-203ENST00000525155 COG2Q14746 738 aa14.55□□□□□ -0.08
CHKA-203ENST00000525155 BMP2KLQ5H9B9 411 aa14.55□□□□□ -0.08
CHKA-203ENST00000525155 CTR9Q6PD62 1173 aa14.55□□□□□ -0.08
CHKA-203ENST00000525155 DIAPH3Q9NSV4 1193 aa14.55□□□□□ -0.08
CHKA-203ENST00000525155 SLC15A5A6NIM6 579 aa14.54□□□□□ -0.08
CHKA-203ENST00000525155 GSPT1P15170 499 aaKnown RBP14.54□□□□□ -0.08
CHKA-203ENST00000525155 CYP2C19P33261 490 aa14.54□□□□□ -0.08
CHKA-203ENST00000525155 MCMDC2Q4G0Z9 681 aa14.54□□□□□ -0.08
CHKA-203ENST00000525155 GIMAP6Q6P9H5 292 aa14.54□□□□□ -0.08
CHKA-203ENST00000525155 AMOTL1Q8IY63 956 aa14.54□□□□□ -0.08
CHKA-203ENST00000525155 C7orf61Q8IZ16 206 aa14.54□□□□□ -0.08
CHKA-203ENST00000525155 RUFY2Q8WXA3 655 aa14.54□□□□□ -0.08
CHKA-203ENST00000525155 OSBP2Q969R2 916 aa14.54□□□□□ -0.08
CHKA-203ENST00000525155 APBA2Q99767 749 aa14.54□□□□□ -0.08
CHKA-203ENST00000525155 C11orf49Q9H6J7 331 aa14.54□□□□□ -0.08
CHKA-203ENST00000525155 TMX2Q9Y320 296 aa14.54□□□□□ -0.08
CHKA-203ENST00000525155 DNAH12Q6ZR08 3092 aa14.53□□□□□ -0.08
CHKA-203ENST00000525155 SYN1P17600 705 aa14.53□□□□□ -0.08
CHKA-203ENST00000525155 DSG3P32926 999 aa14.53□□□□□ -0.08
CHKA-203ENST00000525155 LRRC26Q2I0M4 334 aa14.53□□□□□ -0.08
CHKA-203ENST00000525155 TMEM179Q6ZVK1 233 aa14.53□□□□□ -0.08
CHKA-203ENST00000525155 C16orf86Q6ZW13 317 aa14.53□□□□□ -0.08
CHKA-203ENST00000525155 TRMT44Q8IYL2 757 aaKnown RBP14.53□□□□□ -0.08
CHKA-203ENST00000525155 SPICE1Q8N0Z3 855 aa14.53□□□□□ -0.08
CHKA-203ENST00000525155 LRCH3Q96II8 777 aa14.53□□□□□ -0.08
CHKA-203ENST00000525155 STRBPQ96SI9 672 aaKnown RBP14.53□□□□□ -0.08
CHKA-203ENST00000525155 NACAP1Q9BZK3 213 aa14.53□□□□□ -0.08
CHKA-203ENST00000525155 HOXC10Q9NYD6 342 aa14.53□□□□□ -0.08
CHKA-203ENST00000525155 MYH1P12882 1939 aa14.53□□□□□ -0.08
CHKA-203ENST00000525155 DDX60LQ5H9U9 1706 aaKnown RBP14.52□□□□□ -0.08
CHKA-203ENST00000525155 GSG1L2A8MUP6 293 aa14.52□□□□□ -0.09
CHKA-203ENST00000525155 GPAA1O43292 621 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms