RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 NPLOC4Q8TAT6 608 aa11.17□□□□□ -0.62
TRAPPC9-212ENST00000521944 KLHDC4Q8TBB5 520 aa11.17□□□□□ -0.62
TRAPPC9-212ENST00000521944 EDC3Q96F86 508 aaKnown RBP11.17□□□□□ -0.62
TRAPPC9-212ENST00000521944 GAS2L1Q99501 681 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC9-212ENST00000521944 CFAP54Q96N23 3096 aa11.17□□□□□ -0.62
TRAPPC9-212ENST00000521944 FAM86C2PA6NEL3 165 aa11.16□□□□□ -0.62
TRAPPC9-212ENST00000521944 TRIM6-TRIM34B2RNG4 842 aa11.16□□□□□ -0.62
TRAPPC9-212ENST00000521944 HRO43593 1189 aa11.16□□□□□ -0.62
TRAPPC9-212ENST00000521944 MSCO60682 206 aa11.16□□□□□ -0.62
TRAPPC9-212ENST00000521944 GPR37L1O60883 481 aa11.16□□□□□ -0.62
TRAPPC9-212ENST00000521944 HOXC6P09630 235 aa11.16□□□□□ -0.62
TRAPPC9-212ENST00000521944 CYBAP13498 195 aa11.16□□□□□ -0.62
TRAPPC9-212ENST00000521944 CNGA1P29973 690 aa11.16□□□□□ -0.62
TRAPPC9-212ENST00000521944 CAP2P40123 477 aa11.16□□□□□ -0.62
TRAPPC9-212ENST00000521944 MRE11P49959 708 aa11.16□□□□□ -0.62
TRAPPC9-212ENST00000521944 IRX3P78415 501 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC9-212ENST00000521944 MTMR2Q13614 643 aa11.16□□□□□ -0.62
TRAPPC9-212ENST00000521944 SHROOM1Q2M3G4 852 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC9-212ENST00000521944 RASIP1Q5U651 963 aa11.16□□□□□ -0.62
TRAPPC9-212ENST00000521944 MFSD14CQ5VZR4 134 aa11.16□□□□□ -0.62
TRAPPC9-212ENST00000521944 FERMT2Q96AC1 680 aa11.16□□□□□ -0.62
TRAPPC9-212ENST00000521944 OSBPL5Q9H0X9 879 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC9-212ENST00000521944 PLXNA1Q9UIW2 1896 aa11.16□□□□□ -0.62
TRAPPC9-212ENST00000521944 USP34Q70CQ2 3546 aa11.16□□□□□ -0.62
TRAPPC9-212ENST00000521944 MYBBP1AQ9BQG0 1328 aaKnown RBP11.15□□□□□ -0.62
TRAPPC9-212ENST00000521944 ZDBF2Q9HCK1 2354 aa11.15□□□□□ -0.62
TRAPPC9-212ENST00000521944 USP17L5A8MUK1 530 aa11.15□□□□□ -0.62
TRAPPC9-212ENST00000521944 LDHBP07195 334 aaKnown RBP11.15□□□□□ -0.62
TRAPPC9-212ENST00000521944 NBPF7P0C2Y1 421 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC9-212ENST00000521944 PRSS12P56730 875 aa11.15□□□□□ -0.62
TRAPPC9-212ENST00000521944 BACE1P56817 501 aa11.15□□□□□ -0.62
TRAPPC9-212ENST00000521944 RHBDL3P58872 404 aa11.15□□□□□ -0.62
TRAPPC9-212ENST00000521944 CALD1Q05682 793 aaKnown RBP11.15□□□□□ -0.62
TRAPPC9-212ENST00000521944 PICALMQ13492 652 aa11.15□□□□□ -0.62
TRAPPC9-212ENST00000521944 RALBP1Q15311 655 aa11.15□□□□□ -0.62
TRAPPC9-212ENST00000521944 RABL6Q3YEC7 729 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC9-212ENST00000521944 PACS2Q86VP3 889 aa11.15□□□□□ -0.62
TRAPPC9-212ENST00000521944 ANKRD44Q8N8A2 993 aa11.15□□□□□ -0.62
TRAPPC9-212ENST00000521944 ARRDC4Q8NCT1 418 aa11.15□□□□□ -0.62
TRAPPC9-212ENST00000521944 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.15□□□□□ -0.627e-6■■□□□ 12.2
TRAPPC9-212ENST00000521944 WDR18Q9BV38 432 aa11.15□□□□□ -0.62
TRAPPC9-212ENST00000521944 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.15□□□□□ -0.62
TRAPPC9-212ENST00000521944 CDHR5Q9HBB8 845 aa11.15□□□□□ -0.62
TRAPPC9-212ENST00000521944 PLSCR2Q9NRY7 297 aa11.15□□□□□ -0.62
TRAPPC9-212ENST00000521944 TACC3Q9Y6A5 838 aa11.15□□□□□ -0.62
TRAPPC9-212ENST00000521944 MYH2Q9UKX2 1941 aa11.14□□□□□ -0.63
TRAPPC9-212ENST00000521944 CLTBP09497 229 aa11.14□□□□□ -0.63
TRAPPC9-212ENST00000521944 IGFBP4P22692 258 aa11.14□□□□□ -0.63
TRAPPC9-212ENST00000521944 LRRC41Q15345 812 aa11.14□□□□□ -0.63
TRAPPC9-212ENST00000521944 PUM3Q15397 648 aaKnown RBP11.14□□□□□ -0.63
TRAPPC9-212ENST00000521944 PROX2Q3B8N5 592 aa11.14□□□□□ -0.63
TRAPPC9-212ENST00000521944 ZNF384Q8TF68 577 aa11.14□□□□□ -0.63
TRAPPC9-212ENST00000521944 CDCA7LQ96GN5 454 aa11.14□□□□□ -0.63
TRAPPC9-212ENST00000521944 PAGR1Q9BTK6 254 aa11.14□□□□□ -0.63
TRAPPC9-212ENST00000521944 SMCHD1A6NHR9 2005 aa11.14□□□□□ -0.63
TRAPPC9-212ENST00000521944 SPTBN4Q9H254 2564 aa11.14□□□□□ -0.63
TRAPPC9-212ENST00000521944 SALL1Q9NSC2 1324 aa11.13□□□□□ -0.63
TRAPPC9-212ENST00000521944 SLC15A5A6NIM6 579 aa11.13□□□□□ -0.63
TRAPPC9-212ENST00000521944 IFIT1P09914 478 aaKnown RBP11.13□□□□□ -0.63
TRAPPC9-212ENST00000521944 FPGSQ05932 587 aa11.13□□□□□ -0.63
TRAPPC9-212ENST00000521944 WDR43Q15061 677 aaKnown RBP eCLIP11.13□□□□□ -0.63
TRAPPC9-212ENST00000521944 MRPL50Q8N5N7 158 aaKnown RBP11.13□□□□□ -0.63
TRAPPC9-212ENST00000521944 IL27Q8NEV9 243 aa11.13□□□□□ -0.63
TRAPPC9-212ENST00000521944 TBC1D2Q9BYX2 928 aa11.13□□□□□ -0.63
TRAPPC9-212ENST00000521944 BICC1Q9H694 974 aaKnown RBP11.13□□□□□ -0.63
TRAPPC9-212ENST00000521944 CD320Q9NPF0 282 aa11.13□□□□□ -0.63
TRAPPC9-212ENST00000521944 ATAD5Q96QE3 1844 aa11.12□□□□□ -0.63
TRAPPC9-212ENST00000521944 KBTBD13C9JR72 458 aa11.12□□□□□ -0.63
TRAPPC9-212ENST00000521944 TLL1O43897 1013 aa11.12□□□□□ -0.63
TRAPPC9-212ENST00000521944 VAMP4O75379 141 aa11.12□□□□□ -0.63
TRAPPC9-212ENST00000521944 RAG1P15918 1043 aa11.12□□□□□ -0.63
TRAPPC9-212ENST00000521944 ATP2B2Q01814 1243 aa11.12□□□□□ -0.63
TRAPPC9-212ENST00000521944 FAAP100Q0VG06 881 aa11.12□□□□□ -0.63
TRAPPC9-212ENST00000521944 MMRN1Q13201 1228 aa11.12□□□□□ -0.63
TRAPPC9-212ENST00000521944 PTGDRQ13258 359 aa11.12□□□□□ -0.63
TRAPPC9-212ENST00000521944 GRB14Q14449 540 aa11.12□□□□□ -0.63
TRAPPC9-212ENST00000521944 TMEM240Q5SV17 173 aa11.12□□□□□ -0.63
TRAPPC9-212ENST00000521944 PRAMEF19Q5SWL8 479 aa11.12□□□□□ -0.63
TRAPPC9-212ENST00000521944 C9orf78Q9NZ63 289 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC9-212ENST00000521944 PHF24Q9UPV7 400 aa11.12□□□□□ -0.63
TRAPPC9-212ENST00000521944 YBX2Q9Y2T7 364 aaKnown RBP11.12□□□□□ -0.63
TRAPPC9-212ENST00000521944 GOLGA8CPA6NN73 597 aa11.11□□□□□ -0.63
TRAPPC9-212ENST00000521944 BHMG1C9JSJ3 638 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC9-212ENST00000521944 ERC2O15083 957 aa11.11□□□□□ -0.63
TRAPPC9-212ENST00000521944 ZEB1P37275 1124 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC9-212ENST00000521944 BTDP43251 543 aa11.11□□□□□ -0.63
TRAPPC9-212ENST00000521944 FAM47AQ5JRC9 791 aa11.11□□□□□ -0.63
TRAPPC9-212ENST00000521944 CCAR1Q8IX12 1150 aaKnown RBP11.11□□□□□ -0.63
TRAPPC9-212ENST00000521944 LPIN2Q92539 896 aa11.11□□□□□ -0.63
TRAPPC9-212ENST00000521944 BTBD7Q9P203 1132 aa11.11□□□□□ -0.63
TRAPPC9-212ENST00000521944 KIAA1468Q9P260 1216 aa11.11□□□□□ -0.63
TRAPPC9-212ENST00000521944 TRIOO75962 3097 aa11.11□□□□□ -0.63
TRAPPC9-212ENST00000521944 MYH13Q9UKX3 1938 aa11.11□□□□□ -0.63
TRAPPC9-212ENST00000521944 GPR75-ASB3A0A0A6YYF3 556 aa11.1□□□□□ -0.63
TRAPPC9-212ENST00000521944 PI4K2BG5E9Z4 385 aa11.1□□□□□ -0.63
TRAPPC9-212ENST00000521944 SMIM22K7EJ46 135 aa11.1□□□□□ -0.63
TRAPPC9-212ENST00000521944 SEPT4O43236 478 aa11.1□□□□□ -0.63
TRAPPC9-212ENST00000521944 PQBP1O60828 265 aaKnown RBP11.1□□□□□ -0.63
TRAPPC9-212ENST00000521944 ALDH1L1O75891 902 aa11.1□□□□□ -0.63
TRAPPC9-212ENST00000521944 PHKA1P46020 1223 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms