RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 ARHGEF6Q15052 776 aa13.67□□□□□ -0.22
SPIDR-212ENST00000519661 KIAA1755Q5JYT7 1200 aa13.67□□□□□ -0.22
SPIDR-212ENST00000519661 OTOP1Q7RTM1 612 aa13.67□□□□□ -0.22
SPIDR-212ENST00000519661 TBC1D10CQ8IV04 446 aa13.67□□□□□ -0.22
SPIDR-212ENST00000519661 ANKS1AQ92625 1134 aa13.67□□□□□ -0.22
SPIDR-212ENST00000519661 CEP95Q96GE4 821 aa13.67□□□□□ -0.22
SPIDR-212ENST00000519661 FEZ1Q99689 392 aa13.67□□□□□ -0.22
SPIDR-212ENST00000519661 IL17RBQ9NRM6 502 aa13.67□□□□□ -0.22
SPIDR-212ENST00000519661 ZNF213O14771 459 aa13.66□□□□□ -0.22
SPIDR-212ENST00000519661 EPB41L2O43491 1005 aaKnown RBP13.66□□□□□ -0.22
SPIDR-212ENST00000519661 PLA2G6O60733 806 aa13.66□□□□□ -0.22
SPIDR-212ENST00000519661 PRDM1O75626 825 aa13.66□□□□□ -0.22
SPIDR-212ENST00000519661 CTDSPL2Q05D32 466 aa13.66□□□□□ -0.22
SPIDR-212ENST00000519661 CLEC10AQ8IUN9 316 aa13.66□□□□□ -0.22
SPIDR-212ENST00000519661 TTC14Q96N46 770 aa13.66□□□□□ -0.22
SPIDR-212ENST00000519661 P2RX7Q99572 595 aaKnown RBP13.66□□□□□ -0.22
SPIDR-212ENST00000519661 ESYT1Q9BSJ8 1104 aa13.66□□□□□ -0.22
SPIDR-212ENST00000519661 RBPJLQ9UBG7 517 aa13.66□□□□□ -0.22
SPIDR-212ENST00000519661 RABGAP1Q9Y3P9 1069 aa13.66□□□□□ -0.22
SPIDR-212ENST00000519661 U3KPZ7 1027 aaPredicted RBP13.66□□□□□ -0.22
SPIDR-212ENST00000519661 SPDYE16A6NNV3 312 aaPredicted RBP13.65□□□□□ -0.22
SPIDR-212ENST00000519661 TSPY3P0CV98 308 aa13.65□□□□□ -0.22
SPIDR-212ENST00000519661 TSPY8P0CW00 308 aa13.65□□□□□ -0.22
SPIDR-212ENST00000519661 CTGFP29279 349 aa13.65□□□□□ -0.22
SPIDR-212ENST00000519661 IRX3P78415 501 aaPredicted RBP13.65□□□□□ -0.22
SPIDR-212ENST00000519661 TFAP4Q01664 338 aa13.65□□□□□ -0.22
SPIDR-212ENST00000519661 IMMTQ16891 758 aaKnown RBP13.65□□□□□ -0.22
SPIDR-212ENST00000519661 RCSD1Q6JBY9 416 aa13.65□□□□□ -0.22
SPIDR-212ENST00000519661 FBXO46Q6PJ61 603 aaPredicted RBP13.65□□□□□ -0.22
SPIDR-212ENST00000519661 MFSD6Q6ZSS7 791 aa13.65□□□□□ -0.22
SPIDR-212ENST00000519661 MB21D1Q8N884 522 aa13.65□□□□□ -0.22
SPIDR-212ENST00000519661 SMCR8Q8TEV9 937 aaPredicted RBP13.65□□□□□ -0.22
SPIDR-212ENST00000519661 GMCL1Q96IK5 515 aa13.65□□□□□ -0.22
SPIDR-212ENST00000519661 LSG1Q9H089 658 aaKnown RBP13.65□□□□□ -0.22
SPIDR-212ENST00000519661 GOPCQ9HD26 462 aa13.65□□□□□ -0.22
SPIDR-212ENST00000519661 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.65□□□□□ -0.22
SPIDR-212ENST00000519661 CPA4Q9UI42 421 aa13.65□□□□□ -0.22
SPIDR-212ENST00000519661 F5H6K3 240 aa13.64□□□□□ -0.23
SPIDR-212ENST00000519661 CDC45O75419 566 aa13.64□□□□□ -0.23
SPIDR-212ENST00000519661 PTH1RQ03431 593 aa13.64□□□□□ -0.23
SPIDR-212ENST00000519661 KLRC3Q07444 240 aa13.64□□□□□ -0.23
SPIDR-212ENST00000519661 COG2Q14746 738 aa13.64□□□□□ -0.23
SPIDR-212ENST00000519661 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.64□□□□□ -0.23
SPIDR-212ENST00000519661 SKAP1Q86WV1 359 aa13.64□□□□□ -0.23
SPIDR-212ENST00000519661 DGKHQ86XP1 1220 aa13.64□□□□□ -0.23
SPIDR-212ENST00000519661 CD99L2Q8TCZ2 262 aa13.64□□□□□ -0.23
SPIDR-212ENST00000519661 ESR2Q92731 530 aa13.64□□□□□ -0.23
SPIDR-212ENST00000519661 TRIM47Q96LD4 638 aa13.64□□□□□ -0.23
SPIDR-212ENST00000519661 MTA3Q9BTC8 594 aa13.64□□□□□ -0.23
SPIDR-212ENST00000519661 MCOLN1Q9GZU1 580 aa13.64□□□□□ -0.23
SPIDR-212ENST00000519661 RPAP3Q9H6T3 665 aaPredicted RBP13.64□□□□□ -0.23
SPIDR-212ENST00000519661 CNNM2Q9H8M5 875 aa13.64□□□□□ -0.23
SPIDR-212ENST00000519661 EFCC1Q9HA90 598 aa13.64□□□□□ -0.23
SPIDR-212ENST00000519661 HOXC10Q9NYD6 342 aa13.64□□□□□ -0.23
SPIDR-212ENST00000519661 PTPN22Q9Y2R2 807 aa13.64□□□□□ -0.23
SPIDR-212ENST00000519661 NEDD4P46934 1319 aa13.64□□□□□ -0.23
SPIDR-212ENST00000519661 PARP14Q460N5 1801 aa13.63□□□□□ -0.23
SPIDR-212ENST00000519661 TSPY2A6NKD2 308 aa13.63□□□□□ -0.23
SPIDR-212ENST00000519661 ATP2A1O14983 1001 aa13.63□□□□□ -0.23
SPIDR-212ENST00000519661 CNMDO75829 334 aa13.63□□□□□ -0.23
SPIDR-212ENST00000519661 NDUFB10O96000 172 aa13.63□□□□□ -0.23
SPIDR-212ENST00000519661 CYP21A2P08686 494 aa13.63□□□□□ -0.23
SPIDR-212ENST00000519661 SNHG28P0DPA3 235 aa13.63□□□□□ -0.23
SPIDR-212ENST00000519661 DSG3P32926 999 aa13.63□□□□□ -0.23
SPIDR-212ENST00000519661 IRF5Q13568 498 aa13.63□□□□□ -0.23
SPIDR-212ENST00000519661 TSGA10IPQ3SY00 556 aa13.63□□□□□ -0.23
SPIDR-212ENST00000519661 CCDC178Q5BJE1 867 aa13.63□□□□□ -0.23
SPIDR-212ENST00000519661 FAM47AQ5JRC9 791 aa13.63□□□□□ -0.23
SPIDR-212ENST00000519661 TNS4Q8IZW8 715 aa13.63□□□□□ -0.23
SPIDR-212ENST00000519661 ARMC5Q96C12 935 aa13.63□□□□□ -0.23
SPIDR-212ENST00000519661 TXNRD2Q9NNW7 524 aa13.63□□□□□ -0.23
SPIDR-212ENST00000519661 INCENPQ9NQS7 918 aa13.63□□□□□ -0.23
SPIDR-212ENST00000519661 FCGRTP55899 365 aa13.62□□□□□ -0.23
SPIDR-212ENST00000519661 ERVK-9P63128 1117 aa13.62□□□□□ -0.23
SPIDR-212ENST00000519661 ERVK-24P63145 666 aa13.62□□□□□ -0.23
SPIDR-212ENST00000519661 KIF22Q14807 665 aa13.62□□□□□ -0.23
SPIDR-212ENST00000519661 NECTIN1Q15223 517 aa13.62□□□□□ -0.23
SPIDR-212ENST00000519661 SHCBP1Q8NEM2 672 aa13.62□□□□□ -0.23
SPIDR-212ENST00000519661 REPS2Q8NFH8 660 aa13.62□□□□□ -0.23
SPIDR-212ENST00000519661 GPRC5AQ8NFJ5 357 aa13.62□□□□□ -0.23
SPIDR-212ENST00000519661 NKX2-3Q8TAU0 364 aa13.62□□□□□ -0.23
SPIDR-212ENST00000519661 KRT23Q9C075 422 aa13.62□□□□□ -0.23
SPIDR-212ENST00000519661 CLIP2Q9UDT6 1046 aa13.62□□□□□ -0.23
SPIDR-212ENST00000519661 SRRDQ9UH36 339 aa13.62□□□□□ -0.23
SPIDR-212ENST00000519661 PPP1R9AQ9ULJ8 1098 aa13.62□□□□□ -0.23
SPIDR-212ENST00000519661 RANBP6O60518 1105 aaKnown RBP13.61□□□□□ -0.23
SPIDR-212ENST00000519661 IGHA2P01877 340 aa13.61□□□□□ -0.23
SPIDR-212ENST00000519661 FDX1P10109 184 aa13.61□□□□□ -0.23
SPIDR-212ENST00000519661 TOP1P11387 765 aaKnown RBP13.61□□□□□ -0.23
SPIDR-212ENST00000519661 MAPK4P31152 587 aa13.61□□□□□ -0.23
SPIDR-212ENST00000519661 PSMC4P43686 418 aa13.61□□□□□ -0.23
SPIDR-212ENST00000519661 HAND2P61296 217 aa13.61□□□□□ -0.23
SPIDR-212ENST00000519661 ANKRD13CQ8N6S4 541 aa13.61□□□□□ -0.23
SPIDR-212ENST00000519661 USP6NLQ92738 828 aa13.61□□□□□ -0.23
SPIDR-212ENST00000519661 KCNB2Q92953 911 aa13.61□□□□□ -0.23
SPIDR-212ENST00000519661 ABHD8Q96I13 439 aa13.61□□□□□ -0.23
SPIDR-212ENST00000519661 ARHGAP39Q9C0H5 1083 aa13.61□□□□□ -0.23
SPIDR-212ENST00000519661 GJD2Q9UKL4 321 aa13.61□□□□□ -0.23
SPIDR-212ENST00000519661 TRIM17Q9Y577 477 aa13.61□□□□□ -0.23
SPIDR-212ENST00000519661 ZNF236Q9UL36 1845 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms