RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 RBM26Q5T8P6 1007 aaKnown RBP14.36□□□□□ -0.11
SPIDR-209ENST00000519141 OTUD7BQ6GQQ9 843 aa14.36□□□□□ -0.11
SPIDR-209ENST00000519141 TATDN1Q6P1N9 297 aa14.36□□□□□ -0.11
SPIDR-209ENST00000519141 RBM46Q8TBY0 533 aaKnown RBP14.36□□□□□ -0.11
SPIDR-209ENST00000519141 AIFM3Q96NN9 605 aa14.36□□□□□ -0.11
SPIDR-209ENST00000519141 LMBRD1Q9NUN5 540 aa14.36□□□□□ -0.11
SPIDR-209ENST00000519141 CNPY2Q9Y2B0 182 aa14.36□□□□□ -0.11
SPIDR-209ENST00000519141 PRPF3O43395 683 aaKnown RBP14.35□□□□□ -0.11
SPIDR-209ENST00000519141 FIBPO43427 364 aa14.35□□□□□ -0.11
SPIDR-209ENST00000519141 DDNO94850 711 aaPredicted RBP14.35□□□□□ -0.11
SPIDR-209ENST00000519141 TTLL1O95922 423 aa14.35□□□□□ -0.11
SPIDR-209ENST00000519141 SLURP2P0DP57 97 aa14.35□□□□□ -0.11
SPIDR-209ENST00000519141 FUT2Q10981 343 aa14.35□□□□□ -0.11
SPIDR-209ENST00000519141 TNFAIP1Q13829 316 aa14.35□□□□□ -0.11
SPIDR-209ENST00000519141 GPC2Q8N158 579 aa14.35□□□□□ -0.11
SPIDR-209ENST00000519141 MTMR7Q9Y216 660 aa14.35□□□□□ -0.11
SPIDR-209ENST00000519141 WDR90Q96KV7 1748 aa14.34□□□□□ -0.11
SPIDR-209ENST00000519141 H7C1D1 291 aa14.34□□□□□ -0.11
SPIDR-209ENST00000519141 EGFRP00533 1210 aa14.34□□□□□ -0.11
SPIDR-209ENST00000519141 GUCY1A2P33402 732 aa14.34□□□□□ -0.11
SPIDR-209ENST00000519141 KIF4BQ2VIQ3 1234 aa14.34□□□□□ -0.11
SPIDR-209ENST00000519141 TBC1D10BQ4KMP7 808 aaPredicted RBP14.34□□□□□ -0.11
SPIDR-209ENST00000519141 KRT40Q6A162 431 aa14.34□□□□□ -0.11
SPIDR-209ENST00000519141 FAM173BQ6P4H8 233 aa14.34□□□□□ -0.11
SPIDR-209ENST00000519141 SRBD1Q8N5C6 995 aaKnown RBP14.34□□□□□ -0.11
SPIDR-209ENST00000519141 TMEM87AQ8NBN3 555 aa14.34□□□□□ -0.11
SPIDR-209ENST00000519141 TMEM39BQ9GZU3 492 aa14.34□□□□□ -0.11
SPIDR-209ENST00000519141 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.34□□□□□ -0.11
SPIDR-209ENST00000519141 GDPD2Q9HCC8 539 aa14.34□□□□□ -0.11
SPIDR-209ENST00000519141 GJB4Q9NTQ9 266 aa14.34□□□□□ -0.11
SPIDR-209ENST00000519141 RBM27Q9P2N5 1060 aaKnown RBP14.34□□□□□ -0.11
SPIDR-209ENST00000519141 UBE2Q2LH0YL09 131 aa14.33□□□□□ -0.11
SPIDR-209ENST00000519141 PARP1P09874 1014 aaKnown RBP14.33□□□□□ -0.11
SPIDR-209ENST00000519141 XBP1P17861 261 aa14.33□□□□□ -0.11
SPIDR-209ENST00000519141 ABCB5Q2M3G0 1257 aa14.33□□□□□ -0.11
SPIDR-209ENST00000519141 TMEM179Q6ZVK1 233 aa14.33□□□□□ -0.11
SPIDR-209ENST00000519141 SAMD7Q7Z3H4 446 aa14.33□□□□□ -0.11
SPIDR-209ENST00000519141 CLEC10AQ8IUN9 316 aa14.33□□□□□ -0.11
SPIDR-209ENST00000519141 LZTS2Q9BRK4 669 aa14.33□□□□□ -0.11
SPIDR-209ENST00000519141 CLIP2Q9UDT6 1046 aa14.33□□□□□ -0.11
SPIDR-209ENST00000519141 MAD2L2Q9UI95 211 aa14.33□□□□□ -0.11
SPIDR-209ENST00000519141 BAZ2BQ9UIF8 2168 aaKnown RBP14.33□□□□□ -0.12
SPIDR-209ENST00000519141 GDF11O95390 407 aa14.33□□□□□ -0.12
SPIDR-209ENST00000519141 ATP2B2Q01814 1243 aa14.33□□□□□ -0.12
SPIDR-209ENST00000519141 KIF23Q02241 960 aaPredicted RBP14.33□□□□□ -0.12
SPIDR-209ENST00000519141 BRAPQ7Z569 592 aa14.33□□□□□ -0.12
SPIDR-209ENST00000519141 USP48Q86UV5 1035 aa14.33□□□□□ -0.12
SPIDR-209ENST00000519141 LRRC47Q8N1G4 583 aaKnown RBP14.33□□□□□ -0.12
SPIDR-209ENST00000519141 KANSL2Q9H9L4 492 aa14.33□□□□□ -0.12
SPIDR-209ENST00000519141 DDX49Q9Y6V7 483 aaKnown RBP14.33□□□□□ -0.12
SPIDR-209ENST00000519141 V9GY48 417 aaPredicted RBP14.33□□□□□ -0.12
SPIDR-209ENST00000519141 PALM3A6NDB9 673 aaPredicted RBP14.32□□□□□ -0.12
SPIDR-209ENST00000519141 FSTL1Q12841 308 aa14.32□□□□□ -0.12
SPIDR-209ENST00000519141 GNL2Q13823 731 aaKnown RBP14.32□□□□□ -0.12
SPIDR-209ENST00000519141 SAFBQ15424 915 aaKnown RBP eCLIP14.32□□□□□ -0.12
SPIDR-209ENST00000519141 STAG2Q8N3U4 1231 aa14.32□□□□□ -0.12
SPIDR-209ENST00000519141 ZNF396Q96N95 335 aaPredicted RBP14.32□□□□□ -0.12
SPIDR-209ENST00000519141 SCAND2PQ9GZW5 306 aaPredicted RBP14.32□□□□□ -0.12
SPIDR-209ENST00000519141 CABP5Q9NP86 173 aa14.32□□□□□ -0.12
SPIDR-209ENST00000519141 GPRC5DQ9NZD1 345 aa14.32□□□□□ -0.12
SPIDR-209ENST00000519141 KLRF2D3W0D1 207 aa14.31□□□□□ -0.12
SPIDR-209ENST00000519141 MBD3O95983 291 aa14.31□□□□□ -0.12
SPIDR-209ENST00000519141 ICA1Q05084 483 aa14.31□□□□□ -0.12
SPIDR-209ENST00000519141 RASA3Q14644 834 aa14.31□□□□□ -0.12
SPIDR-209ENST00000519141 SEPT2Q15019 361 aa14.31□□□□□ -0.12
SPIDR-209ENST00000519141 PKN1Q16512 942 aa14.31□□□□□ -0.12
SPIDR-209ENST00000519141 KLHL40Q2TBA0 621 aa14.31□□□□□ -0.12
SPIDR-209ENST00000519141 ASPRV1Q53RT3 343 aa14.31□□□□□ -0.12
SPIDR-209ENST00000519141 ATL3Q6DD88 541 aa14.31□□□□□ -0.12
SPIDR-209ENST00000519141 NYAP2Q9P242 653 aa14.31□□□□□ -0.12
SPIDR-209ENST00000519141 CFAP45Q9UL16 551 aa14.31□□□□□ -0.12
SPIDR-209ENST00000519141 hCG_1642624A0A1W2PR95 340 aa14.3□□□□□ -0.12
SPIDR-209ENST00000519141 TBC1D12O60347 775 aa14.3□□□□□ -0.12
SPIDR-209ENST00000519141 GH2P01242 217 aa14.3□□□□□ -0.12
SPIDR-209ENST00000519141 MMP1P03956 469 aa14.3□□□□□ -0.12
SPIDR-209ENST00000519141 GOLGA8HP0CJ92 632 aa14.3□□□□□ -0.12
SPIDR-209ENST00000519141 PDHBP11177 359 aa14.3□□□□□ -0.12
SPIDR-209ENST00000519141 SCG2P13521 617 aa14.3□□□□□ -0.12
SPIDR-209ENST00000519141 USP17L2Q6R6M4 530 aa14.3□□□□□ -0.12
SPIDR-209ENST00000519141 RASGRP2Q7LDG7 609 aa14.3□□□□□ -0.12
SPIDR-209ENST00000519141 L3MBTL3Q96JM7 780 aaPredicted RBP14.3□□□□□ -0.12
SPIDR-209ENST00000519141 SPATA32Q96LK8 384 aa14.3□□□□□ -0.12
SPIDR-209ENST00000519141 SPZ1Q9BXG8 430 aa14.3□□□□□ -0.12
SPIDR-209ENST00000519141 TFIP11Q9UBB9 837 aaKnown RBP14.3□□□□□ -0.12
SPIDR-209ENST00000519141 HACL1Q9UJ83 578 aa14.3□□□□□ -0.12
SPIDR-209ENST00000519141 ELP1O95163 1332 aa14.3□□□□□ -0.12
SPIDR-209ENST00000519141 USP17L5A8MUK1 530 aa14.3□□□□□ -0.12
SPIDR-209ENST00000519141 KIF28PB7ZC32 967 aa14.3□□□□□ -0.12
SPIDR-209ENST00000519141 EEF2P13639 858 aaKnown RBP14.3□□□□□ -0.12
SPIDR-209ENST00000519141 PFKFB3Q16875 520 aaPredicted RBP14.3□□□□□ -0.12
SPIDR-209ENST00000519141 SHROOM1Q2M3G4 852 aaPredicted RBP14.3□□□□□ -0.12
SPIDR-209ENST00000519141 CDAN1Q8IWY9 1227 aa14.3□□□□□ -0.12
SPIDR-209ENST00000519141 SMC1BQ8NDV3 1235 aa14.3□□□□□ -0.12
SPIDR-209ENST00000519141 PIBF1Q8WXW3 757 aa14.3□□□□□ -0.12
SPIDR-209ENST00000519141 VPS54Q9P1Q0 977 aa14.3□□□□□ -0.12
SPIDR-209ENST00000519141 PGAP2Q9UHJ9 254 aa14.3□□□□□ -0.12
SPIDR-209ENST00000519141 KCNJ14Q9UNX9 436 aa14.3□□□□□ -0.12
SPIDR-209ENST00000519141 ATAD5Q96QE3 1844 aa14.29□□□□□ -0.12
SPIDR-209ENST00000519141 ASTN2O75129 1339 aaPredicted RBP14.29□□□□□ -0.12
SPIDR-209ENST00000519141 SNHG28P0DPA3 235 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms