RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 ABCB5Q2M3G0 1257 aa17.42■□□□□ 0.38
TRAPPC9-205ENST00000518839 ASPRV1Q53RT3 343 aa17.42■□□□□ 0.38
TRAPPC9-205ENST00000518839 RBM26Q5T8P6 1007 aaKnown RBP17.42■□□□□ 0.38
TRAPPC9-205ENST00000518839 ILDR2Q71H61 639 aa17.42■□□□□ 0.38
TRAPPC9-205ENST00000518839 CCDC82Q8N4S0 544 aa17.42■□□□□ 0.38
TRAPPC9-205ENST00000518839 SRBD1Q8N5C6 995 aaKnown RBP17.42■□□□□ 0.38
TRAPPC9-205ENST00000518839 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.42■□□□□ 0.38
TRAPPC9-205ENST00000518839 NYAP2Q9P242 653 aa17.42■□□□□ 0.38
TRAPPC9-205ENST00000518839 MAD2L2Q9UI95 211 aa17.42■□□□□ 0.38
TRAPPC9-205ENST00000518839 ZNF541Q9H0D2 1346 aa17.42■□□□□ 0.38
TRAPPC9-205ENST00000518839 MMP1P03956 469 aa17.41■□□□□ 0.38
TRAPPC9-205ENST00000518839 UBE2HP62256 183 aa17.41■□□□□ 0.38
TRAPPC9-205ENST00000518839 KIF4BQ2VIQ3 1234 aa17.41■□□□□ 0.38
TRAPPC9-205ENST00000518839 NBPF9Q3BBW0 867 aa17.41■□□□□ 0.38
TRAPPC9-205ENST00000518839 CMTR1Q8N1G2 835 aaKnown RBP17.41■□□□□ 0.38
TRAPPC9-205ENST00000518839 MKL1Q969V6 931 aa17.41■□□□□ 0.38
TRAPPC9-205ENST00000518839 CHAMP1Q96JM3 812 aa17.41■□□□□ 0.38
TRAPPC9-205ENST00000518839 AIFM3Q96NN9 605 aa17.41■□□□□ 0.38
TRAPPC9-205ENST00000518839 SPZ1Q9BXG8 430 aa17.41■□□□□ 0.38
TRAPPC9-205ENST00000518839 CLIP2Q9UDT6 1046 aa17.41■□□□□ 0.38
TRAPPC9-205ENST00000518839 SYNPO2Q9UMS6 1093 aa17.41■□□□□ 0.38
TRAPPC9-205ENST00000518839 V9GY48 417 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC9-205ENST00000518839 SCG2P13521 617 aa17.4■□□□□ 0.38
TRAPPC9-205ENST00000518839 GUCY1A2P33402 732 aa17.4■□□□□ 0.38
TRAPPC9-205ENST00000518839 PKN1Q16512 942 aa17.4■□□□□ 0.38
TRAPPC9-205ENST00000518839 PFKFB3Q16875 520 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC9-205ENST00000518839 OTUD7BQ6GQQ9 843 aa17.4■□□□□ 0.38
TRAPPC9-205ENST00000518839 SPATA32Q96LK8 384 aa17.4■□□□□ 0.38
TRAPPC9-205ENST00000518839 FOXP1Q9H334 677 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC9-205ENST00000518839 GDPD2Q9HCC8 539 aa17.4■□□□□ 0.38
TRAPPC9-205ENST00000518839 BRMS1Q9HCU9 246 aa17.4■□□□□ 0.38
TRAPPC9-205ENST00000518839 SH3GLB2Q9NR46 395 aa17.4■□□□□ 0.38
TRAPPC9-205ENST00000518839 KLRF2D3W0D1 207 aa17.39■□□□□ 0.37
TRAPPC9-205ENST00000518839 SNHG28P0DPA3 235 aa17.39■□□□□ 0.37
TRAPPC9-205ENST00000518839 PDHBP11177 359 aa17.39■□□□□ 0.37
TRAPPC9-205ENST00000518839 U2AF2P26368 475 aaKnown RBP eCLIP17.39■□□□□ 0.37
TRAPPC9-205ENST00000518839 FAM173BQ6P4H8 233 aa17.39■□□□□ 0.37
TRAPPC9-205ENST00000518839 SYAP1Q96A49 352 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC9-205ENST00000518839 HOOK2Q96ED9 719 aa17.39■□□□□ 0.37
TRAPPC9-205ENST00000518839 FAM196BA6NMK8 535 aa17.38■□□□□ 0.37
TRAPPC9-205ENST00000518839 MAP3K10Q02779 954 aa17.38■□□□□ 0.37
TRAPPC9-205ENST00000518839 ICA1Q05084 483 aa17.38■□□□□ 0.37
TRAPPC9-205ENST00000518839 GPATCH4Q5T3I0 446 aaKnown RBP17.38■□□□□ 0.37
TRAPPC9-205ENST00000518839 MYSM1Q5VVJ2 828 aa17.38■□□□□ 0.37
TRAPPC9-205ENST00000518839 APOBEC3FQ8IUX4 373 aaKnown RBP17.38■□□□□ 0.37
TRAPPC9-205ENST00000518839 STAG2Q8N3U4 1231 aa17.38■□□□□ 0.37
TRAPPC9-205ENST00000518839 LEO1Q8WVC0 666 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC9-205ENST00000518839 GINM1Q9NU53 330 aa17.38■□□□□ 0.37
TRAPPC9-205ENST00000518839 GPRC5DQ9NZD1 345 aa17.38■□□□□ 0.37
TRAPPC9-205ENST00000518839 SHTN1A0MZ66 631 aa17.37■□□□□ 0.37
TRAPPC9-205ENST00000518839 GOLGA6L4A6NEF3 574 aa17.37■□□□□ 0.37
TRAPPC9-205ENST00000518839 hCG_1984214I3L0E3 225 aa17.37■□□□□ 0.37
TRAPPC9-205ENST00000518839 CALML3P27482 149 aa17.37■□□□□ 0.37
TRAPPC9-205ENST00000518839 RASA3Q14644 834 aa17.37■□□□□ 0.37
TRAPPC9-205ENST00000518839 TBC1D10BQ4KMP7 808 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC9-205ENST00000518839 DIS3L2Q8IYB7 885 aaKnown RBP17.37■□□□□ 0.37
TRAPPC9-205ENST00000518839 LRRC47Q8N1G4 583 aaKnown RBP17.37■□□□□ 0.37
TRAPPC9-205ENST00000518839 ZNF713Q8N859 430 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC9-205ENST00000518839 CCDC148Q8NFR7 591 aa17.37■□□□□ 0.37
TRAPPC9-205ENST00000518839 DCAF4Q8WV16 495 aa17.37■□□□□ 0.37
TRAPPC9-205ENST00000518839 PHF20Q9BVI0 1012 aa17.37■□□□□ 0.37
TRAPPC9-205ENST00000518839 TMEM39BQ9GZU3 492 aa17.37■□□□□ 0.37
TRAPPC9-205ENST00000518839 GJB4Q9NTQ9 266 aa17.37■□□□□ 0.37
TRAPPC9-205ENST00000518839 RTEL1Q9NZ71 1219 aa17.37■□□□□ 0.37
TRAPPC9-205ENST00000518839 RNF181Q9P0P0 153 aa17.37■□□□□ 0.37
TRAPPC9-205ENST00000518839 TFIP11Q9UBB9 837 aaKnown RBP17.37■□□□□ 0.37
TRAPPC9-205ENST00000518839 PGAP2Q9UHJ9 254 aa17.37■□□□□ 0.37
TRAPPC9-205ENST00000518839 RCOR1Q9UKL0 485 aa17.37■□□□□ 0.37
TRAPPC9-205ENST00000518839 MTMR7Q9Y216 660 aa17.37■□□□□ 0.37
TRAPPC9-205ENST00000518839 ATAD5Q96QE3 1844 aa17.37■□□□□ 0.37
TRAPPC9-205ENST00000518839 BAZ2BQ9UIF8 2168 aaKnown RBP17.36■□□□□ 0.37
TRAPPC9-205ENST00000518839 USP17L5A8MUK1 530 aa17.36■□□□□ 0.37
TRAPPC9-205ENST00000518839 KIF28PB7ZC32 967 aa17.36■□□□□ 0.37
TRAPPC9-205ENST00000518839 GDF11O95390 407 aa17.36■□□□□ 0.37
TRAPPC9-205ENST00000518839 YEATS4O95619 227 aa17.36■□□□□ 0.37
TRAPPC9-205ENST00000518839 GH2P01242 217 aa17.36■□□□□ 0.37
TRAPPC9-205ENST00000518839 EEF2P13639 858 aaKnown RBP17.36■□□□□ 0.37
TRAPPC9-205ENST00000518839 KRT2P35908 639 aa17.36■□□□□ 0.37
TRAPPC9-205ENST00000518839 ATP2B2Q01814 1243 aa17.36■□□□□ 0.37
TRAPPC9-205ENST00000518839 ZNF543Q08ER8 600 aa17.36■□□□□ 0.37
TRAPPC9-205ENST00000518839 SEPT2Q15019 361 aa17.36■□□□□ 0.37
TRAPPC9-205ENST00000518839 GALNT17Q6IS24 598 aa17.36■□□□□ 0.37
TRAPPC9-205ENST00000518839 USP17L2Q6R6M4 530 aa17.36■□□□□ 0.37
TRAPPC9-205ENST00000518839 SAMD7Q7Z3H4 446 aa17.36■□□□□ 0.37
TRAPPC9-205ENST00000518839 NOSTRINQ8IVI9 506 aa17.36■□□□□ 0.37
TRAPPC9-205ENST00000518839 GPT2Q8TD30 523 aa17.36■□□□□ 0.37
TRAPPC9-205ENST00000518839 CCDC12Q8WUD4 166 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC9-205ENST00000518839 RRP36Q96EU6 259 aaKnown RBP17.36■□□□□ 0.37
TRAPPC9-205ENST00000518839 ARHGEF10LQ9HCE6 1279 aa17.36■□□□□ 0.37
TRAPPC9-205ENST00000518839 POLR3EQ9NVU0 708 aa17.36■□□□□ 0.37
TRAPPC9-205ENST00000518839 VPS54Q9P1Q0 977 aa17.36■□□□□ 0.37
TRAPPC9-205ENST00000518839 SEC63Q9UGP8 760 aaKnown RBP17.36■□□□□ 0.37
TRAPPC9-205ENST00000518839 HACL1Q9UJ83 578 aa17.36■□□□□ 0.37
TRAPPC9-205ENST00000518839 UBE2Q2LH0YL09 131 aa17.35■□□□□ 0.37
TRAPPC9-205ENST00000518839 LMOD1P29536 600 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC9-205ENST00000518839 GSE1Q14687 1217 aa17.35■□□□□ 0.37
TRAPPC9-205ENST00000518839 GMCL1P1Q8NEA9 526 aa17.35■□□□□ 0.37
TRAPPC9-205ENST00000518839 KCNG4Q8TDN1 519 aa17.35■□□□□ 0.37
TRAPPC9-205ENST00000518839 USP28Q96RU2 1077 aa17.35■□□□□ 0.37
TRAPPC9-205ENST00000518839 RIOX1Q9H6W3 641 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms