RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 UBE2SQ16763 222 aa11.21□□□□□ -0.62
EFCAB13-203ENST00000517484 WDR78Q5VTH9 848 aa11.21□□□□□ -0.62
EFCAB13-203ENST00000517484 ANO1Q5XXA6 986 aa11.21□□□□□ -0.62
EFCAB13-203ENST00000517484 RCSD1Q6JBY9 416 aa11.21□□□□□ -0.62
EFCAB13-203ENST00000517484 ACER1Q8TDN7 264 aa11.21□□□□□ -0.62
EFCAB13-203ENST00000517484 TRIM75PA6NK02 468 aa11.21□□□□□ -0.62
EFCAB13-203ENST00000517484 RGL2O15211 777 aa11.21□□□□□ -0.62
EFCAB13-203ENST00000517484 COBLO75128 1261 aa11.21□□□□□ -0.62
EFCAB13-203ENST00000517484 EARS2Q5JPH6 523 aaKnown RBP11.21□□□□□ -0.62
EFCAB13-203ENST00000517484 SLFN13Q68D06 897 aa11.21□□□□□ -0.62
EFCAB13-203ENST00000517484 SGMS1Q86VZ5 419 aa11.21□□□□□ -0.62
EFCAB13-203ENST00000517484 C7orf43Q8WVR3 580 aa11.21□□□□□ -0.62
EFCAB13-203ENST00000517484 FAM205AQ6ZU69 1335 aa11.2□□□□□ -0.62
EFCAB13-203ENST00000517484 USP17L10C9JJH3 530 aa11.2□□□□□ -0.62
EFCAB13-203ENST00000517484 WNT10BO00744 389 aa11.2□□□□□ -0.62
EFCAB13-203ENST00000517484 FMNL1O95466 1100 aaPredicted RBP11.2□□□□□ -0.62
EFCAB13-203ENST00000517484 GRIN1Q05586 938 aa11.2□□□□□ -0.62
EFCAB13-203ENST00000517484 NTRK3Q16288 839 aa11.2□□□□□ -0.62
EFCAB13-203ENST00000517484 ANGEL2Q5VTE6 544 aaKnown RBP11.2□□□□□ -0.62
EFCAB13-203ENST00000517484 KLHL10Q6JEL2 608 aa11.2□□□□□ -0.62
EFCAB13-203ENST00000517484 GRAMD1CQ8IYS0 662 aa11.2□□□□□ -0.62
EFCAB13-203ENST00000517484 RRP36Q96EU6 259 aaKnown RBP11.2□□□□□ -0.62
EFCAB13-203ENST00000517484 TSPY26PQ9H489 355 aa11.2□□□□□ -0.62
EFCAB13-203ENST00000517484 BECN2A8MW95 431 aa11.2□□□□□ -0.62
EFCAB13-203ENST00000517484 SORBS3O60504 671 aa11.2□□□□□ -0.62
EFCAB13-203ENST00000517484 SCG2P13521 617 aa11.2□□□□□ -0.62
EFCAB13-203ENST00000517484 CASP1P29466 404 aa11.2□□□□□ -0.62
EFCAB13-203ENST00000517484 PLS1Q14651 629 aa11.2□□□□□ -0.62
EFCAB13-203ENST00000517484 ILDR2Q71H61 639 aa11.2□□□□□ -0.62
EFCAB13-203ENST00000517484 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.2□□□□□ -0.62
EFCAB13-203ENST00000517484 TMEM260Q9NX78 707 aa11.2□□□□□ -0.62
EFCAB13-203ENST00000517484 USP25Q9UHP3 1055 aa11.2□□□□□ -0.62
EFCAB13-203ENST00000517484 SMCO2A6NFE2 343 aa11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 PTMSP20962 102 aa11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 KRT2P35908 639 aa11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 L1TD1Q5T7N2 865 aaKnown RBP11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 NOSTRINQ8IVI9 506 aa11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 GLIS2Q9BZE0 524 aaPredicted RBP11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 DNAJC25Q9H1X3 360 aa11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 MYOZ2Q9NPC6 264 aa11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 SPEF2Q9C093 1822 aa11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 TMTC3Q6ZXV5 915 aa11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 SH3BP5LQ7L8J4 393 aa11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 ZKSCAN4Q969J2 545 aaPredicted RBP11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 DHX58Q96C10 678 aa11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 EEF2KMTQ96G04 330 aa11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 FBXO28Q9NVF7 368 aa11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 MTMR4Q9NYA4 1195 aa11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 CICQ96RK0 1608 aaPredicted RBP11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 TTLL1O95922 423 aa11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 TOP1P11387 765 aaKnown RBP11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 HOXA13P31271 388 aaPredicted RBP11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 NDUFA8P51970 172 aa11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 MAP3K11Q16584 847 aa11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 PTPN21Q16825 1174 aa11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 HHIPL2Q6UWX4 724 aa11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 C16orf86Q6ZW13 317 aa11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 USP49Q70CQ1 688 aa11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 AGXT2Q9BYV1 514 aa11.19□□□□□ -0.62
EFCAB13-203ENST00000517484 SPDYE2BA6NHP3 402 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 USP17L15C9J2P7 530 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 USP17L13C9JLJ4 530 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 USP17L11C9JVI0 530 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 USP17L18D6R9N7 530 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 USP17L22D6RA61 530 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 USP17L17D6RBQ6 530 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 USP17L19D6RCP7 530 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 USP17L20D6RJB6 530 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 ORC4O43929 436 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 SPDYE6P0CI01 402 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 CALM1P0DP23 149 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 CALM2P0DP24 149 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 CALM3P0DP25 149 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 USP17L24Q0WX57 530 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 TNIP1Q15025 636 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 SBK1Q52WX2 424 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 CCDC183Q5T5S1 534 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 NBPF12Q5TAG4 269 aaPredicted RBP11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 USP17L6PQ6QN14 398 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 SLC30A10Q6XR72 485 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 ZDHHC15Q96MV8 337 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 TANGO6Q9C0B7 1094 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 PES1O00541 588 aaKnown RBP11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 CFBP00751 764 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 SHMT1P34896 483 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 JAG1P78504 1218 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 NEDD1Q8NHV4 660 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 ZHX3Q9H4I2 956 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 MAPK8IP1Q9UQF2 711 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 IRS2Q9Y4H2 1338 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 F5H6K3 240 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 TGFB2P61812 414 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 KLRC3Q07444 240 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 LUZP1Q86V48 1076 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 SYT17Q9BSW7 474 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 POLD4Q9HCU8 107 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 ANAPC4Q9UJX5 808 aa11.18□□□□□ -0.62
EFCAB13-203ENST00000517484 NHSQ6T4R5 1651 aa11.17□□□□□ -0.62
EFCAB13-203ENST00000517484 CYTH3O43739 400 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms