RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 SBF1O95248 1867 aa10.61□□□□□ -0.71
CPNE4-213ENST00000515418 STK36Q9NRP7 1315 aa10.61□□□□□ -0.71
CPNE4-213ENST00000515418 PRPF3O43395 683 aaKnown RBP10.61□□□□□ -0.71
CPNE4-213ENST00000515418 MYO1BO43795 1136 aa10.61□□□□□ -0.71
CPNE4-213ENST00000515418 DEXIO95424 95 aa10.61□□□□□ -0.71
CPNE4-213ENST00000515418 LMNB1P20700 586 aa10.61□□□□□ -0.71
CPNE4-213ENST00000515418 NOVP48745 357 aa10.61□□□□□ -0.71
CPNE4-213ENST00000515418 NT5C2P49902 561 aa10.61□□□□□ -0.71
CPNE4-213ENST00000515418 ZNF280AP59817 542 aaPredicted RBP10.61□□□□□ -0.71
CPNE4-213ENST00000515418 KRT85P78386 507 aa10.61□□□□□ -0.71
CPNE4-213ENST00000515418 KIF23Q02241 960 aaPredicted RBP10.61□□□□□ -0.71
CPNE4-213ENST00000515418 GRM4Q14833 912 aa10.61□□□□□ -0.71
CPNE4-213ENST00000515418 SKOR2Q2VWA4 1001 aaPredicted RBP10.61□□□□□ -0.71
CPNE4-213ENST00000515418 TATDN1Q6P1N9 297 aa10.61□□□□□ -0.71
CPNE4-213ENST00000515418 RNF26Q9BY78 433 aaPredicted RBP10.61□□□□□ -0.71
CPNE4-213ENST00000515418 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.61□□□□□ -0.71
CPNE4-213ENST00000515418 VPS54Q9P1Q0 977 aa10.61□□□□□ -0.71
CPNE4-213ENST00000515418 RBM27Q9P2N5 1060 aaKnown RBP10.61□□□□□ -0.71
CPNE4-213ENST00000515418 ATRNL1Q5VV63 1379 aa10.6□□□□□ -0.71
CPNE4-213ENST00000515418 PALM3A6NDB9 673 aaPredicted RBP10.6□□□□□ -0.71
CPNE4-213ENST00000515418 CYTH3O43739 400 aa10.6□□□□□ -0.71
CPNE4-213ENST00000515418 TTLL1O95922 423 aa10.6□□□□□ -0.71
CPNE4-213ENST00000515418 PTMSP20962 102 aa10.6□□□□□ -0.71
CPNE4-213ENST00000515418 RPS12P25398 132 aaKnown RBP10.6□□□□□ -0.71
CPNE4-213ENST00000515418 KIF5BP33176 963 aa10.6□□□□□ -0.71
CPNE4-213ENST00000515418 TRIM29Q14134 588 aa10.6□□□□□ -0.71
CPNE4-213ENST00000515418 SEPT2Q15019 361 aa10.6□□□□□ -0.71
CPNE4-213ENST00000515418 KLHL40Q2TBA0 621 aa10.6□□□□□ -0.71
CPNE4-213ENST00000515418 METTL16Q86W50 562 aaKnown RBP10.6□□□□□ -0.71
CPNE4-213ENST00000515418 SIAH1Q8IUQ4 282 aa10.6□□□□□ -0.71
CPNE4-213ENST00000515418 WASF1Q92558 559 aa10.6□□□□□ -0.71
CPNE4-213ENST00000515418 VAT1LQ9HCJ6 419 aa10.6□□□□□ -0.71
CPNE4-213ENST00000515418 CNTNAP5Q8WYK1 1306 aa10.6□□□□□ -0.71
CPNE4-213ENST00000515418 BTBD18B2RXH4 712 aa10.59□□□□□ -0.71
CPNE4-213ENST00000515418 KLRF2D3W0D1 207 aa10.59□□□□□ -0.71
CPNE4-213ENST00000515418 RAD21O60216 631 aa10.59□□□□□ -0.71
CPNE4-213ENST00000515418 CAVIN1Q6NZI2 390 aaKnown RBP10.59□□□□□ -0.71
CPNE4-213ENST00000515418 OXER1Q8TDS5 423 aa10.59□□□□□ -0.71
CPNE4-213ENST00000515418 LEO1Q8WVC0 666 aaPredicted RBP10.59□□□□□ -0.71
CPNE4-213ENST00000515418 DPF2Q92785 391 aa10.59□□□□□ -0.71
CPNE4-213ENST00000515418 SPATA32Q96LK8 384 aa10.59□□□□□ -0.71
CPNE4-213ENST00000515418 CCDC17Q96LX7 622 aa10.59□□□□□ -0.71
CPNE4-213ENST00000515418 USP28Q96RU2 1077 aa10.59□□□□□ -0.71
CPNE4-213ENST00000515418 UBA5Q9GZZ9 404 aa10.59□□□□□ -0.71
CPNE4-213ENST00000515418 FRMPD2Q68DX3 1309 aaPredicted RBP10.59□□□□□ -0.71
CPNE4-213ENST00000515418 MYH4Q9Y623 1939 aa10.59□□□□□ -0.71
CPNE4-213ENST00000515418 PLIN4Q96Q06 1357 aa10.59□□□□□ -0.71
CPNE4-213ENST00000515418 ADAMTS3O15072 1205 aa10.59□□□□□ -0.71
CPNE4-213ENST00000515418 GH2P01242 217 aa10.59□□□□□ -0.71
CPNE4-213ENST00000515418 MMP1P03956 469 aa10.59□□□□□ -0.71
CPNE4-213ENST00000515418 PARP1P09874 1014 aaKnown RBP10.59□□□□□ -0.71
CPNE4-213ENST00000515418 EEF2P13639 858 aaKnown RBP10.59□□□□□ -0.71
CPNE4-213ENST00000515418 GNL2Q13823 731 aaKnown RBP10.59□□□□□ -0.71
CPNE4-213ENST00000515418 RASA3Q14644 834 aa10.59□□□□□ -0.71
CPNE4-213ENST00000515418 GSE1Q14687 1217 aa10.59□□□□□ -0.71
CPNE4-213ENST00000515418 ABCB5Q2M3G0 1257 aa10.59□□□□□ -0.71
CPNE4-213ENST00000515418 TMEM87AQ8NBN3 555 aa10.59□□□□□ -0.71
CPNE4-213ENST00000515418 MAP3K14Q99558 947 aa10.59□□□□□ -0.71
CPNE4-213ENST00000515418 GPCPD1Q9NPB8 672 aa10.59□□□□□ -0.71
CPNE4-213ENST00000515418 PGAP2Q9UHJ9 254 aa10.59□□□□□ -0.71
CPNE4-213ENST00000515418 MYH15Q9Y2K3 1946 aa10.58□□□□□ -0.72
CPNE4-213ENST00000515418 POLR2AP24928 1970 aaKnown RBP10.58□□□□□ -0.72
CPNE4-213ENST00000515418 DDNO94850 711 aaPredicted RBP10.58□□□□□ -0.72
CPNE4-213ENST00000515418 PDHBP11177 359 aa10.58□□□□□ -0.72
CPNE4-213ENST00000515418 EPS15P42566 896 aa10.58□□□□□ -0.72
CPNE4-213ENST00000515418 NR5A1Q13285 461 aa10.58□□□□□ -0.72
CPNE4-213ENST00000515418 FKBP1CQ5VVH2 108 aa10.58□□□□□ -0.72
CPNE4-213ENST00000515418 DIS3L2Q8IYB7 885 aaKnown RBP10.58□□□□□ -0.72
CPNE4-213ENST00000515418 GPKOWQ92917 476 aaPredicted RBP eCLIP10.58□□□□□ -0.72
CPNE4-213ENST00000515418 RNF181Q9P0P0 153 aa10.58□□□□□ -0.72
CPNE4-213ENST00000515418 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.58□□□□□ -0.72
CPNE4-213ENST00000515418 HACL1Q9UJ83 578 aa10.58□□□□□ -0.72
CPNE4-213ENST00000515418 CLIC4Q9Y696 253 aa10.58□□□□□ -0.72
CPNE4-213ENST00000515418 DICER1Q9UPY3 1922 aaKnown RBP10.58□□□□□ -0.72
CPNE4-213ENST00000515418 H7C1D1 291 aa10.57□□□□□ -0.72
CPNE4-213ENST00000515418 SCG2P13521 617 aa10.57□□□□□ -0.72
CPNE4-213ENST00000515418 U2AF2P26368 475 aaKnown RBP eCLIP10.57□□□□□ -0.72
CPNE4-213ENST00000515418 KIF4BQ2VIQ3 1234 aa10.57□□□□□ -0.72
CPNE4-213ENST00000515418 MYSM1Q5VVJ2 828 aa10.57□□□□□ -0.72
CPNE4-213ENST00000515418 PRAMEF18Q5VWM3 479 aa10.57□□□□□ -0.72
CPNE4-213ENST00000515418 TTBK2Q6IQ55 1244 aa10.57□□□□□ -0.72
CPNE4-213ENST00000515418 FAM83AQ86UY5 434 aa10.57□□□□□ -0.72
CPNE4-213ENST00000515418 TRPM4Q8TD43 1214 aa10.57□□□□□ -0.72
CPNE4-213ENST00000515418 PGBD1Q96JS3 809 aa10.57□□□□□ -0.72
CPNE4-213ENST00000515418 SCAND2PQ9GZW5 306 aaPredicted RBP10.57□□□□□ -0.72
CPNE4-213ENST00000515418 KANSL2Q9H9L4 492 aa10.57□□□□□ -0.72
CPNE4-213ENST00000515418 TMEM63CQ9P1W3 806 aa10.57□□□□□ -0.72
CPNE4-213ENST00000515418 CFAP45Q9UL16 551 aa10.57□□□□□ -0.72
CPNE4-213ENST00000515418 GREB1LQ9C091 1923 aaPredicted RBP10.57□□□□□ -0.72
CPNE4-213ENST00000515418 SLC16A2P36021 539 aa10.57□□□□□ -0.72
CPNE4-213ENST00000515418 GNAQP50148 359 aa10.57□□□□□ -0.72
CPNE4-213ENST00000515418 UBE2HP62256 183 aa10.57□□□□□ -0.72
CPNE4-213ENST00000515418 PFKFB3Q16875 520 aaPredicted RBP10.57□□□□□ -0.72
CPNE4-213ENST00000515418 NOM1Q5C9Z4 860 aaKnown RBP10.57□□□□□ -0.72
CPNE4-213ENST00000515418 TMEM179Q6ZVK1 233 aa10.57□□□□□ -0.72
CPNE4-213ENST00000515418 KCTD1Q719H9 257 aa10.57□□□□□ -0.72
CPNE4-213ENST00000515418 BRAPQ7Z569 592 aa10.57□□□□□ -0.72
CPNE4-213ENST00000515418 HOMER1Q86YM7 354 aa10.57□□□□□ -0.72
CPNE4-213ENST00000515418 GPC2Q8N158 579 aa10.57□□□□□ -0.72
CPNE4-213ENST00000515418 TEPSINQ96N21 525 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms