RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 MTFR1Q15390 333 aa22.58■■□□□ 1.21
LPCAT1-206ENST00000514484 VPS53Q5VIR6 699 aa22.58■■□□□ 1.21
LPCAT1-206ENST00000514484 GPRC5AQ8NFJ5 357 aa22.58■■□□□ 1.21
LPCAT1-206ENST00000514484 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.58■■□□□ 1.21
LPCAT1-206ENST00000514484 NACAP1Q9BZK3 213 aa22.58■■□□□ 1.21
LPCAT1-206ENST00000514484 TANGO6Q9C0B7 1094 aa22.58■■□□□ 1.21
LPCAT1-206ENST00000514484 MKNK2Q9HBH9 465 aa22.58■■□□□ 1.21
LPCAT1-206ENST00000514484 EEF2P13639 858 aaKnown RBP22.57■■□□□ 1.2
LPCAT1-206ENST00000514484 Q3C1V9 767 aa22.57■■□□□ 1.2
LPCAT1-206ENST00000514484 BIN2Q9UBW5 565 aaPredicted RBP22.57■■□□□ 1.2
LPCAT1-206ENST00000514484 SPDYE16A6NNV3 312 aaPredicted RBP22.56■■□□□ 1.2
LPCAT1-206ENST00000514484 ADCY3O60266 1144 aa22.56■■□□□ 1.2
LPCAT1-206ENST00000514484 CNMDO75829 334 aa22.56■■□□□ 1.2
LPCAT1-206ENST00000514484 EN2P19622 333 aaPredicted RBP22.56■■□□□ 1.2
LPCAT1-206ENST00000514484 NMIQ13287 307 aaPredicted RBP22.56■■□□□ 1.2
LPCAT1-206ENST00000514484 TMEM106CQ9BVX2 250 aa22.56■■□□□ 1.2
LPCAT1-206ENST00000514484 PORCNQ9H237 461 aa22.56■■□□□ 1.2
LPCAT1-206ENST00000514484 TMX2Q9Y320 296 aa22.56■■□□□ 1.2
LPCAT1-206ENST00000514484 PPARAQ07869 468 aa22.55■■□□□ 1.2
LPCAT1-206ENST00000514484 SLAIN1Q8ND83 568 aa22.55■■□□□ 1.2
LPCAT1-206ENST00000514484 GTF3C2Q8WUA4 911 aaPredicted RBP22.55■■□□□ 1.2
LPCAT1-206ENST00000514484 OSBPL3Q9H4L5 887 aa22.55■■□□□ 1.2
LPCAT1-206ENST00000514484 SH2D4AQ9H788 454 aa22.55■■□□□ 1.2
LPCAT1-206ENST00000514484 VCPKMTQ9H867 229 aa22.55■■□□□ 1.2
LPCAT1-206ENST00000514484 KANSL2Q9H9L4 492 aa22.55■■□□□ 1.2
LPCAT1-206ENST00000514484 HELLSQ9NRZ9 838 aa22.55■■□□□ 1.2
LPCAT1-206ENST00000514484 RAD21O60216 631 aa22.54■■□□□ 1.2
LPCAT1-206ENST00000514484 PDE4AP27815 886 aa22.54■■□□□ 1.2
LPCAT1-206ENST00000514484 SAMD1Q6SPF0 538 aaPredicted RBP22.54■■□□□ 1.2
LPCAT1-206ENST00000514484 ZNF589Q86UQ0 364 aaPredicted RBP22.54■■□□□ 1.2
LPCAT1-206ENST00000514484 BTBD7Q9P203 1132 aa22.54■■□□□ 1.2
LPCAT1-206ENST00000514484 CTDSPL2Q05D32 466 aa22.53■■□□□ 1.2
LPCAT1-206ENST00000514484 IRF5Q13568 498 aa22.53■■□□□ 1.2
LPCAT1-206ENST00000514484 MCMDC2Q4G0Z9 681 aa22.53■■□□□ 1.2
LPCAT1-206ENST00000514484 LPAR1Q92633 364 aa22.53■■□□□ 1.2
LPCAT1-206ENST00000514484 RABGAP1Q9Y3P9 1069 aa22.53■■□□□ 1.2
LPCAT1-206ENST00000514484 INHAP05111 366 aa22.52■■□□□ 1.2
LPCAT1-206ENST00000514484 CCAR1Q8IX12 1150 aaKnown RBP22.52■■□□□ 1.2
LPCAT1-206ENST00000514484 ZNF444Q8N0Y2 327 aaPredicted RBP22.52■■□□□ 1.2
LPCAT1-206ENST00000514484 GJD2Q9UKL4 321 aa22.52■■□□□ 1.2
LPCAT1-206ENST00000514484 FLOT1O75955 427 aa22.51■■□□□ 1.19
LPCAT1-206ENST00000514484 CCL5P13501 91 aa22.51■■□□□ 1.19
LPCAT1-206ENST00000514484 MAPK4P31152 587 aa22.51■■□□□ 1.19
LPCAT1-206ENST00000514484 UBXN2AP68543 259 aa22.51■■□□□ 1.19
LPCAT1-206ENST00000514484 FAM47AQ5JRC9 791 aa22.51■■□□□ 1.19
LPCAT1-206ENST00000514484 WDR78Q5VTH9 848 aa22.51■■□□□ 1.19
LPCAT1-206ENST00000514484 LBX2Q6XYB7 198 aa22.51■■□□□ 1.19
LPCAT1-206ENST00000514484 GPR142Q7Z601 462 aa22.51■■□□□ 1.19
LPCAT1-206ENST00000514484 GOPCQ9HD26 462 aa22.51■■□□□ 1.19
LPCAT1-206ENST00000514484 INCENPQ9NQS7 918 aa22.51■■□□□ 1.19
LPCAT1-206ENST00000514484 LAMA4Q16363 1823 aa22.51■■□□□ 1.19
LPCAT1-206ENST00000514484 IGKV6D-41A0A0C4DH26 115 aa22.5■■□□□ 1.19
LPCAT1-206ENST00000514484 WDR46O15213 610 aaKnown RBP22.5■■□□□ 1.19
LPCAT1-206ENST00000514484 SDSP20132 328 aa22.5■■□□□ 1.19
LPCAT1-206ENST00000514484 PDE4BQ07343 736 aa22.5■■□□□ 1.19
LPCAT1-206ENST00000514484 COG2Q14746 738 aa22.5■■□□□ 1.19
LPCAT1-206ENST00000514484 PXYLP1Q8TE99 480 aa22.5■■□□□ 1.19
LPCAT1-206ENST00000514484 ATG4CQ96DT6 458 aa22.5■■□□□ 1.19
LPCAT1-206ENST00000514484 CEP95Q96GE4 821 aa22.5■■□□□ 1.19
LPCAT1-206ENST00000514484 UNC93B1Q9H1C4 597 aa22.5■■□□□ 1.19
LPCAT1-206ENST00000514484 ZNF287Q9HBT7 754 aa22.5■■□□□ 1.19
LPCAT1-206ENST00000514484 CWC22Q9HCG8 908 aaKnown RBP22.5■■□□□ 1.19
LPCAT1-206ENST00000514484 FBXO28Q9NVF7 368 aa22.5■■□□□ 1.19
LPCAT1-206ENST00000514484 TACC3Q9Y6A5 838 aa22.5■■□□□ 1.19
LPCAT1-206ENST00000514484 CCDC171Q6TFL3 1326 aa22.5■■□□□ 1.19
LPCAT1-206ENST00000514484 SLC3A2P08195 630 aaKnown RBP22.49■■□□□ 1.19
LPCAT1-206ENST00000514484 CYP2B6P20813 491 aa22.49■■□□□ 1.19
LPCAT1-206ENST00000514484 FAM83BQ5T0W9 1011 aa22.49■■□□□ 1.19
LPCAT1-206ENST00000514484 NUP88Q99567 741 aaPredicted RBP22.49■■□□□ 1.19
LPCAT1-206ENST00000514484 RNF208Q9H0X6 261 aa22.49■■□□□ 1.19
LPCAT1-206ENST00000514484 CLIP2Q9UDT6 1046 aa22.49■■□□□ 1.19
LPCAT1-206ENST00000514484 PLIN4Q96Q06 1357 aa22.49■■□□□ 1.19
LPCAT1-206ENST00000514484 TSPY3P0CV98 308 aa22.48■■□□□ 1.19
LPCAT1-206ENST00000514484 TSPY8P0CW00 308 aa22.48■■□□□ 1.19
LPCAT1-206ENST00000514484 HSPD1P10809 573 aaKnown RBP22.48■■□□□ 1.19
LPCAT1-206ENST00000514484 DSG3P32926 999 aa22.48■■□□□ 1.19
LPCAT1-206ENST00000514484 TRIM32Q13049 653 aa22.48■■□□□ 1.19
LPCAT1-206ENST00000514484 PLEKHH3Q7Z736 793 aa22.48■■□□□ 1.19
LPCAT1-206ENST00000514484 LRRC47Q8N1G4 583 aaKnown RBP22.48■■□□□ 1.19
LPCAT1-206ENST00000514484 SOCS4Q8WXH5 440 aa22.48■■□□□ 1.19
LPCAT1-206ENST00000514484 SHISA4Q96DD7 197 aa22.48■■□□□ 1.19
LPCAT1-206ENST00000514484 NUDT12Q9BQG2 462 aa22.48■■□□□ 1.19
LPCAT1-206ENST00000514484 NYAP2Q9P242 653 aa22.48■■□□□ 1.19
LPCAT1-206ENST00000514484 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.48■■□□□ 1.19
LPCAT1-206ENST00000514484 ZNFX1Q9P2E3 1918 aaKnown RBP22.48■■□□□ 1.19
LPCAT1-206ENST00000514484 GSPT1P15170 499 aaKnown RBP22.47■■□□□ 1.19
LPCAT1-206ENST00000514484 CCNA1P78396 465 aa22.47■■□□□ 1.19
LPCAT1-206ENST00000514484 TFAP4Q01664 338 aa22.47■■□□□ 1.19
LPCAT1-206ENST00000514484 CWC27Q6UX04 472 aaKnown RBP22.47■■□□□ 1.19
LPCAT1-206ENST00000514484 TRIB2Q92519 343 aa22.47■■□□□ 1.19
LPCAT1-206ENST00000514484 DIAPH3Q9NSV4 1193 aa22.47■■□□□ 1.19
LPCAT1-206ENST00000514484 HOXC10Q9NYD6 342 aa22.47■■□□□ 1.19
LPCAT1-206ENST00000514484 NDUFB10O96000 172 aa22.46■■□□□ 1.19
LPCAT1-206ENST00000514484 FGAP02671 866 aa22.46■■□□□ 1.19
LPCAT1-206ENST00000514484 HMGCRP04035 888 aa22.46■■□□□ 1.19
LPCAT1-206ENST00000514484 HAND2P61296 217 aa22.46■■□□□ 1.19
LPCAT1-206ENST00000514484 PLS1Q14651 629 aa22.46■■□□□ 1.19
LPCAT1-206ENST00000514484 ALX1Q15699 326 aa22.46■■□□□ 1.19
LPCAT1-206ENST00000514484 MORN1Q5T089 497 aa22.46■■□□□ 1.19
LPCAT1-206ENST00000514484 TICAM2Q86XR7 235 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms