RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 CYP2D6P10635 497 aa11.73□□□□□ -0.53
TCOF1-212ENST00000513538 PDE6AP16499 860 aa11.73□□□□□ -0.53
TCOF1-212ENST00000513538 ADORA2AP29274 412 aa11.73□□□□□ -0.53
TCOF1-212ENST00000513538 CNGA1P29973 690 aa11.73□□□□□ -0.53
TCOF1-212ENST00000513538 ATP2B2Q01814 1243 aa11.73□□□□□ -0.53
TCOF1-212ENST00000513538 GJC2Q5T442 439 aaPredicted RBP11.73□□□□□ -0.53
TCOF1-212ENST00000513538 AACSQ86V21 672 aa11.73□□□□□ -0.53
TCOF1-212ENST00000513538 CERS3Q8IU89 383 aa11.73□□□□□ -0.53
TCOF1-212ENST00000513538 ITPRIPQ8IWB1 547 aa11.73□□□□□ -0.53
TCOF1-212ENST00000513538 PLXNA1Q9UIW2 1896 aa11.73□□□□□ -0.53
TCOF1-212ENST00000513538 IVNS1ABPQ9Y6Y0 642 aa11.73□□□□□ -0.53
TCOF1-212ENST00000513538 MAGEB6P1A0A0J9YX57 407 aa11.72□□□□□ -0.53
TCOF1-212ENST00000513538 TCRBV5S4A2TA0A5A2 114 aa11.72□□□□□ -0.53
TCOF1-212ENST00000513538 MSCO60682 206 aa11.72□□□□□ -0.53
TCOF1-212ENST00000513538 MAP3K12Q12852 859 aa11.72□□□□□ -0.53
TCOF1-212ENST00000513538 SLFNL1Q499Z3 407 aa11.72□□□□□ -0.53
TCOF1-212ENST00000513538 C9orf50Q5SZB4 431 aa11.72□□□□□ -0.53
TCOF1-212ENST00000513538 FAM109BQ6ICB4 259 aaPredicted RBP11.72□□□□□ -0.53
TCOF1-212ENST00000513538 SIAH1Q8IUQ4 282 aa11.72□□□□□ -0.53
TCOF1-212ENST00000513538 LCORLQ8N3X6 602 aa11.72□□□□□ -0.53
TCOF1-212ENST00000513538 SDR42E1Q8WUS8 393 aa11.72□□□□□ -0.53
TCOF1-212ENST00000513538 FAM161BQ96MY7 647 aa11.72□□□□□ -0.53
TCOF1-212ENST00000513538 COL25A1Q9BXS0 654 aaPredicted RBP11.72□□□□□ -0.53
TCOF1-212ENST00000513538 SPATC1LQ9H0A9 340 aa11.72□□□□□ -0.53
TCOF1-212ENST00000513538 IL1RAPL2Q9NP60 686 aa11.72□□□□□ -0.53
TCOF1-212ENST00000513538 CABP5Q9NP86 173 aa11.72□□□□□ -0.53
TCOF1-212ENST00000513538 MYH7P12883 1935 aa11.72□□□□□ -0.53
TCOF1-212ENST00000513538 ZNF532Q9HCE3 1301 aa11.71□□□□□ -0.53
TCOF1-212ENST00000513538 UNC80Q8N2C7 3258 aa11.71□□□□□ -0.53
TCOF1-212ENST00000513538 POLR3DP05423 398 aaPredicted RBP11.71□□□□□ -0.53
TCOF1-212ENST00000513538 ERCC3P19447 782 aa11.71□□□□□ -0.53
TCOF1-212ENST00000513538 COG2Q14746 738 aa11.71□□□□□ -0.53
TCOF1-212ENST00000513538 SNX17Q15036 470 aa11.71□□□□□ -0.53
TCOF1-212ENST00000513538 SHHQ15465 462 aa11.71□□□□□ -0.53
TCOF1-212ENST00000513538 PRAMEF19Q5SWL8 479 aa11.71□□□□□ -0.53
TCOF1-212ENST00000513538 OLFML2BQ68BL8 750 aa11.71□□□□□ -0.53
TCOF1-212ENST00000513538 FTSJ3Q8IY81 847 aaKnown RBP11.71□□□□□ -0.53
TCOF1-212ENST00000513538 DYNLL2Q96FJ2 89 aa11.71□□□□□ -0.53
TCOF1-212ENST00000513538 LBHD1Q9BQE6 289 aaPredicted RBP11.71□□□□□ -0.53
TCOF1-212ENST00000513538 TANGO6Q9C0B7 1094 aa11.71□□□□□ -0.53
TCOF1-212ENST00000513538 DCP1AQ9NPI6 582 aaPredicted RBP11.71□□□□□ -0.53
TCOF1-212ENST00000513538 MCM9Q9NXL9 1143 aa11.71□□□□□ -0.53
TCOF1-212ENST00000513538 ATP11BQ9Y2G3 1177 aa11.71□□□□□ -0.53
TCOF1-212ENST00000513538 LAMA2P24043 3122 aaKnown RBP11.71□□□□□ -0.54
TCOF1-212ENST00000513538 GREB1LQ9C091 1923 aaPredicted RBP11.7□□□□□ -0.54
TCOF1-212ENST00000513538 MPHOSPH10O00566 681 aaKnown RBP11.7□□□□□ -0.54
TCOF1-212ENST00000513538 CHGBP05060 677 aa11.7□□□□□ -0.54
TCOF1-212ENST00000513538 AKR1B1P15121 316 aa11.7□□□□□ -0.54
TCOF1-212ENST00000513538 TRIM60Q495X7 471 aa11.7□□□□□ -0.54
TCOF1-212ENST00000513538 SLC9C2Q5TAH2 1124 aa11.7□□□□□ -0.54
TCOF1-212ENST00000513538 SLC39A5Q6ZMH5 540 aa11.7□□□□□ -0.54
TCOF1-212ENST00000513538 SH3RF1Q7Z6J0 888 aa11.7□□□□□ -0.54
TCOF1-212ENST00000513538 DPP9Q86TI2 863 aa11.7□□□□□ -0.54
TCOF1-212ENST00000513538 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.7□□□□□ -0.54
TCOF1-212ENST00000513538 SHCBP1Q8NEM2 672 aa11.7□□□□□ -0.54
TCOF1-212ENST00000513538 ATG4CQ96DT6 458 aa11.7□□□□□ -0.54
TCOF1-212ENST00000513538 CRNKL1Q9BZJ0 848 aaKnown RBP11.7□□□□□ -0.54
TCOF1-212ENST00000513538 PDLIM7Q9NR12 457 aa11.7□□□□□ -0.54
TCOF1-212ENST00000513538 CYP2D7A0A087X1C5 515 aa11.69□□□□□ -0.54
TCOF1-212ENST00000513538 GOLIM4O00461 696 aa11.69□□□□□ -0.54
TCOF1-212ENST00000513538 SEPT4O43236 478 aa11.69□□□□□ -0.54
TCOF1-212ENST00000513538 PRKAB2O43741 272 aa11.69□□□□□ -0.54
TCOF1-212ENST00000513538 DSG3P32926 999 aa11.69□□□□□ -0.54
TCOF1-212ENST00000513538 FAM47AQ5JRC9 791 aa11.69□□□□□ -0.54
TCOF1-212ENST00000513538 TMED8Q6PL24 325 aaPredicted RBP11.69□□□□□ -0.54
TCOF1-212ENST00000513538 SPICE1Q8N0Z3 855 aa11.69□□□□□ -0.54
TCOF1-212ENST00000513538 PANK1Q8TE04 598 aa11.69□□□□□ -0.54
TCOF1-212ENST00000513538 BADQ92934 168 aa11.69□□□□□ -0.54
TCOF1-212ENST00000513538 MAML3Q96JK9 1138 aa11.69□□□□□ -0.54
TCOF1-212ENST00000513538 ARMT1Q9H993 441 aa11.69□□□□□ -0.54
TCOF1-212ENST00000513538 HOXC10Q9NYD6 342 aa11.69□□□□□ -0.54
TCOF1-212ENST00000513538 TRIM43BA6NCK2 446 aa11.68□□□□□ -0.54
TCOF1-212ENST00000513538 STRNO43815 780 aa11.68□□□□□ -0.54
TCOF1-212ENST00000513538 ITGB8P26012 769 aa11.68□□□□□ -0.54
TCOF1-212ENST00000513538 ADCYAP1R1P41586 468 aa11.68□□□□□ -0.54
TCOF1-212ENST00000513538 TMEM132BQ14DG7 1078 aa11.68□□□□□ -0.54
TCOF1-212ENST00000513538 LRRC41Q15345 812 aa11.68□□□□□ -0.54
TCOF1-212ENST00000513538 ZNF697Q5TEC3 545 aa11.68□□□□□ -0.54
TCOF1-212ENST00000513538 TMEM179Q6ZVK1 233 aa11.68□□□□□ -0.54
TCOF1-212ENST00000513538 POTEDQ86YR6 584 aa11.68□□□□□ -0.54
TCOF1-212ENST00000513538 ARRDC4Q8NCT1 418 aa11.68□□□□□ -0.54
TCOF1-212ENST00000513538 RHPN1Q8TCX5 695 aa11.68□□□□□ -0.54
TCOF1-212ENST00000513538 FERMT2Q96AC1 680 aa11.68□□□□□ -0.54
TCOF1-212ENST00000513538 TRIM43Q96BQ3 446 aaPredicted RBP11.68□□□□□ -0.54
TCOF1-212ENST00000513538 DNAJC2Q99543 621 aaKnown RBP11.68□□□□□ -0.54
TCOF1-212ENST00000513538 CDX2Q99626 313 aaPredicted RBP11.68□□□□□ -0.54
TCOF1-212ENST00000513538 TTYH1Q9H313 450 aaPredicted RBP11.68□□□□□ -0.54
TCOF1-212ENST00000513538 PRDM5Q9NQX1 630 aaPredicted RBP11.68□□□□□ -0.54
TCOF1-212ENST00000513538 FBXO28Q9NVF7 368 aa11.68□□□□□ -0.54
TCOF1-212ENST00000513538 PRKAG2Q9UGJ0 569 aa11.68□□□□□ -0.54
TCOF1-212ENST00000513538 EYSQ5T1H1 3165 aa11.68□□□□□ -0.54
TCOF1-212ENST00000513538 KBTBD13C9JR72 458 aa11.67□□□□□ -0.54
TCOF1-212ENST00000513538 FLOT1O75955 427 aa11.67□□□□□ -0.54
TCOF1-212ENST00000513538 MBD4O95243 580 aa11.67□□□□□ -0.54
TCOF1-212ENST00000513538 MYCNP04198 464 aaPredicted RBP11.67□□□□□ -0.54
TCOF1-212ENST00000513538 EPHB4P54760 987 aa11.67□□□□□ -0.54
TCOF1-212ENST00000513538 ICA1Q05084 483 aa11.67□□□□□ -0.54
TCOF1-212ENST00000513538 PLS1Q14651 629 aa11.67□□□□□ -0.54
TCOF1-212ENST00000513538 TTF1Q15361 905 aaPredicted RBP11.67□□□□□ -0.54
TCOF1-212ENST00000513538 SAMD1Q6SPF0 538 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms