RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 THAP5Q7Z6K1 395 aa6.13□□□□□ -1.43
CAST-229ENST00000510098 PIWIL2Q8TC59 973 aaKnown RBP6.13□□□□□ -1.43
CAST-229ENST00000510098 NKD1Q969G9 470 aa6.13□□□□□ -1.43
CAST-229ENST00000510098 GPRASP2Q96D09 838 aa6.13□□□□□ -1.43
CAST-229ENST00000510098 C8orf37Q96NL8 207 aa6.13□□□□□ -1.43
CAST-229ENST00000510098 NT5C1AQ9BXI3 368 aa6.13□□□□□ -1.43
CAST-229ENST00000510098 EHMT1Q9H9B1 1298 aa6.13□□□□□ -1.43
CAST-229ENST00000510098 LMCD1Q9NZU5 365 aa6.13□□□□□ -1.43
CAST-229ENST00000510098 BTBD11A6QL63 1104 aa6.12□□□□□ -1.43
CAST-229ENST00000510098 PAPLNO95428 1278 aa6.12□□□□□ -1.43
CAST-229ENST00000510098 YBX3P16989 372 aaKnown RBP eCLIP6.12□□□□□ -1.43
CAST-229ENST00000510098 JUNBP17275 347 aaPredicted RBP6.12□□□□□ -1.43
CAST-229ENST00000510098 SLITRK4Q8IW52 837 aa6.12□□□□□ -1.43
CAST-229ENST00000510098 REXO1Q8N1G1 1221 aaKnown RBP6.12□□□□□ -1.43
CAST-229ENST00000510098 RNF141Q8WVD5 230 aa6.12□□□□□ -1.43
CAST-229ENST00000510098 KREMEN1Q96MU8 473 aa6.12□□□□□ -1.43
CAST-229ENST00000510098 DUSP15Q9H1R2 295 aaPredicted RBP6.12□□□□□ -1.43
CAST-229ENST00000510098 GMIPQ9P107 970 aa6.12□□□□□ -1.43
CAST-229ENST00000510098 KCNH3Q9ULD8 1083 aa6.12□□□□□ -1.43
CAST-229ENST00000510098 RGS13O14921 159 aa6.11□□□□□ -1.43
CAST-229ENST00000510098 RAG1P15918 1043 aa6.11□□□□□ -1.43
CAST-229ENST00000510098 GBP1P32455 592 aa6.11□□□□□ -1.43
CAST-229ENST00000510098 OVOS1Q6IE37 1185 aa6.11□□□□□ -1.43
CAST-229ENST00000510098 ATG4DQ86TL0 474 aaPredicted RBP6.11□□□□□ -1.43
CAST-229ENST00000510098 VPS37DQ86XT2 251 aa6.11□□□□□ -1.43
CAST-229ENST00000510098 DTWD2Q8NBA8 298 aa6.11□□□□□ -1.43
CAST-229ENST00000510098 ASIC4Q96FT7 647 aa6.11□□□□□ -1.43
CAST-229ENST00000510098 TINF2Q9BSI4 451 aa6.11□□□□□ -1.43
CAST-229ENST00000510098 ANTXR1Q9H6X2 564 aa6.11□□□□□ -1.43
CAST-229ENST00000510098 UBOX5O94941 541 aa6.1□□□□□ -1.43
CAST-229ENST00000510098 GJA8P48165 433 aa6.1□□□□□ -1.43
CAST-229ENST00000510098 ZNF165P49910 485 aa6.1□□□□□ -1.43
CAST-229ENST00000510098 ATG4CQ96DT6 458 aa6.1□□□□□ -1.43
CAST-229ENST00000510098 SPATA32Q96LK8 384 aa6.1□□□□□ -1.43
CAST-229ENST00000510098 TRIT1Q9H3H1 467 aaKnown RBP6.1□□□□□ -1.43
CAST-229ENST00000510098 ESR1P03372 595 aa6.09□□□□□ -1.43
CAST-229ENST00000510098 SRFP11831 508 aa6.09□□□□□ -1.43
CAST-229ENST00000510098 TPP2P29144 1249 aaPredicted RBP6.09□□□□□ -1.43
CAST-229ENST00000510098 POLR2BP30876 1174 aaKnown RBP6.09□□□□□ -1.43
CAST-229ENST00000510098 DNAJA1P31689 397 aaKnown RBP6.09□□□□□ -1.43
CAST-229ENST00000510098 CDCP2Q5VXM1 449 aa6.09□□□□□ -1.43
CAST-229ENST00000510098 VWCEQ96DN2 955 aa6.09□□□□□ -1.43
CAST-229ENST00000510098 ASPNQ9BXN1 380 aa6.09□□□□□ -1.43
CAST-229ENST00000510098 GPR62Q9BZJ7 368 aa6.09□□□□□ -1.43
CAST-229ENST00000510098 CNNM2Q9H8M5 875 aa6.09□□□□□ -1.43
CAST-229ENST00000510098 GPATCH2Q9NW75 528 aa6.09□□□□□ -1.43
CAST-229ENST00000510098 CARMIL2Q6F5E8 1435 aa6.09□□□□□ -1.43
CAST-229ENST00000510098 KRTAP4-8A0A0G2JLE6 195 aa6.08□□□□□ -1.44
CAST-229ENST00000510098 ARID5AQ03989 594 aa6.08□□□□□ -1.44
CAST-229ENST00000510098 GAB4Q2WGN9 574 aa6.08□□□□□ -1.44
CAST-229ENST00000510098 NLRC3Q7RTR2 1065 aa6.08□□□□□ -1.44
CAST-229ENST00000510098 TMPRSS7Q7RTY8 843 aa6.08□□□□□ -1.44
CAST-229ENST00000510098 CREG2Q8IUH2 290 aa6.08□□□□□ -1.44
CAST-229ENST00000510098 POU5F2Q8N7G0 328 aa6.08□□□□□ -1.44
CAST-229ENST00000510098 RASGRP4Q8TDF6 673 aa6.08□□□□□ -1.44
CAST-229ENST00000510098 TMEM40Q8WWA1 233 aa6.08□□□□□ -1.44
CAST-229ENST00000510098 CTNND2Q9UQB3 1225 aa6.08□□□□□ -1.44
CAST-229ENST00000510098 EFR3BQ9Y2G0 817 aa6.08□□□□□ -1.44
CAST-229ENST00000510098 SHISA3A0PJX4 238 aa6.07□□□□□ -1.44
CAST-229ENST00000510098 LRRFIP1Q32MZ4 808 aaKnown RBP6.07□□□□□ -1.44
CAST-229ENST00000510098 OGFOD2Q6N063 350 aa6.07□□□□□ -1.44
CAST-229ENST00000510098 TSPYL5Q86VY4 417 aaPredicted RBP6.07□□□□□ -1.44
CAST-229ENST00000510098 SLC43A3Q8NBI5 491 aa6.07□□□□□ -1.44
CAST-229ENST00000510098 FLAD1Q8NFF5 587 aa6.07□□□□□ -1.44
CAST-229ENST00000510098 CCDC120Q96HB5 630 aa6.07□□□□□ -1.44
CAST-229ENST00000510098 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.07□□□□□ -1.44
CAST-229ENST00000510098 C19orf73Q9NVV2 129 aa6.07□□□□□ -1.44
CAST-229ENST00000510098 DNAJC25-GNG10A0A024R161 153 aa6.06□□□□□ -1.44
CAST-229ENST00000510098 MEIS3P2A8K0S8 358 aa6.06□□□□□ -1.44
CAST-229ENST00000510098 NME1P15531 152 aaKnown RBP6.06□□□□□ -1.44
CAST-229ENST00000510098 NASPP49321 788 aaPredicted RBP6.06□□□□□ -1.44
CAST-229ENST00000510098 RNF4P78317 190 aa6.06□□□□□ -1.44
CAST-229ENST00000510098 COL9A2Q14055 689 aaPredicted RBP6.06□□□□□ -1.44
CAST-229ENST00000510098 SF3A1Q15459 793 aaKnown RBP6.06□□□□□ -1.44
CAST-229ENST00000510098 FYB2Q5VWT5 728 aa6.06□□□□□ -1.44
CAST-229ENST00000510098 FAM168AQ92567 244 aa6.06□□□□□ -1.44
CAST-229ENST00000510098 ALPK1Q96QP1 1244 aa6.06□□□□□ -1.44
CAST-229ENST00000510098 FERD3LQ96RJ6 166 aa6.06□□□□□ -1.44
CAST-229ENST00000510098 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.06□□□□□ -1.44
CAST-229ENST00000510098 TANGO6Q9C0B7 1094 aa6.06□□□□□ -1.44
CAST-229ENST00000510098 ASCC2Q9H1I8 757 aaPredicted RBP6.06□□□□□ -1.44
CAST-229ENST00000510098 GINM1Q9NU53 330 aa6.06□□□□□ -1.44
CAST-229ENST00000510098 SLAMF8Q9P0V8 285 aa6.06□□□□□ -1.44
CAST-229ENST00000510098 DUSP13Q9UII6 198 aa6.06□□□□□ -1.44
CAST-229ENST00000510098 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.06□□□□□ -1.44
CAST-229ENST00000510098 IMPDH2P12268 514 aa6.05□□□□□ -1.44
CAST-229ENST00000510098 ATF4P18848 351 aaPredicted RBP6.05□□□□□ -1.44
CAST-229ENST00000510098 GDNFP39905 211 aa6.05□□□□□ -1.44
CAST-229ENST00000510098 RALGPS1Q5JS13 557 aa6.05□□□□□ -1.44
CAST-229ENST00000510098 NBPF12Q5TAG4 269 aaPredicted RBP6.05□□□□□ -1.44
CAST-229ENST00000510098 FBXW10Q5XX13 1052 aa6.05□□□□□ -1.44
CAST-229ENST00000510098 CPLX3Q8WVH0 158 aa6.05□□□□□ -1.44
CAST-229ENST00000510098 SREK1Q8WXA9 508 aaKnown RBP6.05□□□□□ -1.44
CAST-229ENST00000510098 SEC16BQ96JE7 1060 aa6.05□□□□□ -1.44
CAST-229ENST00000510098 SLC9A7Q96T83 725 aa6.05□□□□□ -1.44
CAST-229ENST00000510098 ZNRF3Q9ULT6 936 aa6.05□□□□□ -1.44
CAST-229ENST00000510098 TNFRSF10CO14798 259 aa6.04□□□□□ -1.44
CAST-229ENST00000510098 CLEC3AO75596 197 aa6.04□□□□□ -1.44
CAST-229ENST00000510098 SSBP05455 408 aaKnown RBP eCLIP6.04□□□□□ -1.44
CAST-229ENST00000510098 CCNFP41002 786 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms