RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 NFAT5O94916 1531 aa10.08□□□□□ -0.8
UBE2B-204ENST00000504431 NRAPQ86VF7 1730 aa10.08□□□□□ -0.8
UBE2B-204ENST00000504431 PPM1GO15355 546 aaPredicted RBP10.08□□□□□ -0.8
UBE2B-204ENST00000504431 TCF3P15923 654 aa10.08□□□□□ -0.8
UBE2B-204ENST00000504431 COL8A1P27658 744 aa10.08□□□□□ -0.8
UBE2B-204ENST00000504431 RBM6P78332 1123 aaKnown RBP10.08□□□□□ -0.8
UBE2B-204ENST00000504431 FANCCQ00597 558 aa10.08□□□□□ -0.8
UBE2B-204ENST00000504431 LDLRAD1Q5T700 205 aa10.08□□□□□ -0.8
UBE2B-204ENST00000504431 PCNX4Q63HM2 1172 aa10.08□□□□□ -0.8
UBE2B-204ENST00000504431 TTBK2Q6IQ55 1244 aa10.08□□□□□ -0.8
UBE2B-204ENST00000504431 RELL1Q8IUW5 271 aa10.08□□□□□ -0.8
UBE2B-204ENST00000504431 TRIM56Q9BRZ2 755 aaKnown RBP10.08□□□□□ -0.8
UBE2B-204ENST00000504431 RSRP1Q9BUV0 290 aa10.08□□□□□ -0.8
UBE2B-204ENST00000504431 COL18A1P39060 1754 aa10.08□□□□□ -0.8
UBE2B-204ENST00000504431 CGNL1Q0VF96 1302 aa10.07□□□□□ -0.8
UBE2B-204ENST00000504431 GLI3P10071 1580 aa10.07□□□□□ -0.8
UBE2B-204ENST00000504431 CPDO75976 1380 aa10.07□□□□□ -0.8
UBE2B-204ENST00000504431 TM4SF5O14894 197 aa10.07□□□□□ -0.8
UBE2B-204ENST00000504431 GSTP1P09211 210 aaKnown RBP10.07□□□□□ -0.8
UBE2B-204ENST00000504431 LIG3P49916 1009 aa10.07□□□□□ -0.8
UBE2B-204ENST00000504431 VPS72Q15906 364 aa10.07□□□□□ -0.8
UBE2B-204ENST00000504431 LENG1Q96BZ8 264 aaPredicted RBP10.07□□□□□ -0.8
UBE2B-204ENST00000504431 NRSN2Q9GZP1 204 aa10.07□□□□□ -0.8
UBE2B-204ENST00000504431 CBX8Q9HC52 389 aa10.07□□□□□ -0.8
UBE2B-204ENST00000504431 KRT82Q9NSB4 513 aa10.07□□□□□ -0.8
UBE2B-204ENST00000504431 GGT7Q9UJ14 662 aa10.07□□□□□ -0.8
UBE2B-204ENST00000504431 KNSTRNQ9Y448 316 aa10.07□□□□□ -0.8
UBE2B-204ENST00000504431 NWD2Q9ULI1 1742 aa10.07□□□□□ -0.8
UBE2B-204ENST00000504431 MAP3K19Q56UN5 1328 aa10.07□□□□□ -0.8
UBE2B-204ENST00000504431 LMO7Q8WWI1 1683 aa10.06□□□□□ -0.8
UBE2B-204ENST00000504431 ADAM11O75078 769 aa10.06□□□□□ -0.8
UBE2B-204ENST00000504431 MAOBP27338 520 aa10.06□□□□□ -0.8
UBE2B-204ENST00000504431 AMPHP49418 695 aa10.06□□□□□ -0.8
UBE2B-204ENST00000504431 DDX10Q13206 875 aaKnown RBP10.06□□□□□ -0.8
UBE2B-204ENST00000504431 GRIK4Q16099 956 aa10.06□□□□□ -0.8
UBE2B-204ENST00000504431 LLGL2Q6P1M3 1020 aa10.06□□□□□ -0.8
UBE2B-204ENST00000504431 ACAD11Q709F0 780 aa10.06□□□□□ -0.8
UBE2B-204ENST00000504431 USP54Q70EL1 1684 aa10.06□□□□□ -0.8
UBE2B-204ENST00000504431 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.05□□□□□ -0.8
UBE2B-204ENST00000504431 AATKQ6ZMQ8 1374 aa10.05□□□□□ -0.8
UBE2B-204ENST00000504431 LOC100289279A0A1B0GTE1 492 aa10.05□□□□□ -0.8
UBE2B-204ENST00000504431 PDE3AQ14432 1141 aa10.05□□□□□ -0.8
UBE2B-204ENST00000504431 TOM1L2Q6ZVM7 507 aa10.05□□□□□ -0.8
UBE2B-204ENST00000504431 ERMP1Q7Z2K6 904 aa10.05□□□□□ -0.8
UBE2B-204ENST00000504431 TMEM130Q8N3G9 435 aa10.05□□□□□ -0.8
UBE2B-204ENST00000504431 RUSC1Q9BVN2 902 aa10.05□□□□□ -0.8
UBE2B-204ENST00000504431 RNF208Q9H0X6 261 aa10.05□□□□□ -0.8
UBE2B-204ENST00000504431 RGS12O14924 1447 aa10.05□□□□□ -0.8
UBE2B-204ENST00000504431 MAP2P11137 1827 aaKnown RBP10.05□□□□□ -0.8
UBE2B-204ENST00000504431 SPATA31A5Q5VU36 1347 aa10.05□□□□□ -0.8
UBE2B-204ENST00000504431 SPATA31A7Q8IWB4 1347 aa10.05□□□□□ -0.8
UBE2B-204ENST00000504431 COL5A2P05997 1499 aaPredicted RBP10.04□□□□□ -0.8
UBE2B-204ENST00000504431 RGPD2P0DJD1 1756 aa10.04□□□□□ -0.8
UBE2B-204ENST00000504431 DDX3YO15523 660 aaKnown RBP10.04□□□□□ -0.8
UBE2B-204ENST00000504431 PAGE1O75459 146 aa10.04□□□□□ -0.8
UBE2B-204ENST00000504431 BMP6P22004 513 aa10.04□□□□□ -0.8
UBE2B-204ENST00000504431 HOXC9P31274 260 aa10.04□□□□□ -0.8
UBE2B-204ENST00000504431 KCNMA1Q12791 1236 aa10.04□□□□□ -0.8
UBE2B-204ENST00000504431 MAP3K11Q16584 847 aa10.04□□□□□ -0.8
UBE2B-204ENST00000504431 HSP90AB2PQ58FF8 381 aa10.04□□□□□ -0.8
UBE2B-204ENST00000504431 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.04□□□□□ -0.8
UBE2B-204ENST00000504431 MORC1Q86VD1 984 aa10.04□□□□□ -0.8
UBE2B-204ENST00000504431 UBASH3BQ8TF42 649 aa10.04□□□□□ -0.8
UBE2B-204ENST00000504431 KCNK4Q9NYG8 393 aa10.04□□□□□ -0.8
UBE2B-204ENST00000504431 PEAK1Q9H792 1746 aa10.04□□□□□ -0.8
UBE2B-204ENST00000504431 SPATA31A1Q5TZJ5 1347 aa10.04□□□□□ -0.8
UBE2B-204ENST00000504431 BRWD3Q6RI45 1802 aa10.03□□□□□ -0.8
UBE2B-204ENST00000504431 TRIM37O94972 964 aa10.03□□□□□ -0.8
UBE2B-204ENST00000504431 SELPP16109 830 aa10.03□□□□□ -0.8
UBE2B-204ENST00000504431 EXOSC6Q5RKV6 272 aaKnown RBP10.03□□□□□ -0.8
UBE2B-204ENST00000504431 AGMOQ6ZNB7 445 aa10.03□□□□□ -0.8
UBE2B-204ENST00000504431 PDZD3Q86UT5 571 aa10.03□□□□□ -0.8
UBE2B-204ENST00000504431 IP6K1Q92551 441 aa10.03□□□□□ -0.8
UBE2B-204ENST00000504431 KCNB2Q92953 911 aa10.03□□□□□ -0.8
UBE2B-204ENST00000504431 TMEM74Q96NL1 305 aa10.03□□□□□ -0.8
UBE2B-204ENST00000504431 MEGF11A6BM72 1044 aa10.02□□□□□ -0.81
UBE2B-204ENST00000504431 GBP2P32456 591 aaPredicted RBP10.02□□□□□ -0.81
UBE2B-204ENST00000504431 ZNF252P-AS1Q0IIN9 211 aa10.02□□□□□ -0.81
UBE2B-204ENST00000504431 SHISA2Q6UWI4 295 aa10.02□□□□□ -0.81
UBE2B-204ENST00000504431 USHBP1Q8N6Y0 703 aa10.02□□□□□ -0.81
UBE2B-204ENST00000504431 AKTIPQ9H8T0 292 aa10.02□□□□□ -0.81
UBE2B-204ENST00000504431 CYP4F12Q9HCS2 524 aa10.02□□□□□ -0.81
UBE2B-204ENST00000504431 POLKQ9UBT6 870 aa10.02□□□□□ -0.81
UBE2B-204ENST00000504431 ANKRD26Q9UPS8 1709 aa10.02□□□□□ -0.81
UBE2B-204ENST00000504431 F8W735 103 aaPredicted RBP10.01□□□□□ -0.81
UBE2B-204ENST00000504431 HDLBPQ00341 1268 aaKnown RBP10.01□□□□□ -0.81
UBE2B-204ENST00000504431 MAP1SQ66K74 1059 aaPredicted RBP10.01□□□□□ -0.81
UBE2B-204ENST00000504431 USP48Q86UV5 1035 aa10.01□□□□□ -0.81
UBE2B-204ENST00000504431 TCP11L2Q8N4U5 519 aa10.01□□□□□ -0.81
UBE2B-204ENST00000504431 PHC3Q8NDX5 983 aa10.01□□□□□ -0.81
UBE2B-204ENST00000504431 ACSBG1Q96GR2 724 aa10.01□□□□□ -0.81
UBE2B-204ENST00000504431 DCAF5Q96JK2 942 aa10.01□□□□□ -0.81
UBE2B-204ENST00000504431 CEP41Q9BYV8 373 aa10.01□□□□□ -0.81
UBE2B-204ENST00000504431 RAD18Q9NS91 495 aa10.01□□□□□ -0.81
UBE2B-204ENST00000504431 WDR17Q8IZU2 1322 aa10.01□□□□□ -0.81
UBE2B-204ENST00000504431 SYNGAP1Q96PV0 1343 aa10.01□□□□□ -0.81
UBE2B-204ENST00000504431 CRB1P82279 1406 aa10□□□□□ -0.81
UBE2B-204ENST00000504431 WISP1O95388 367 aa10□□□□□ -0.81
UBE2B-204ENST00000504431 ANKRD34AQ69YU3 496 aa10□□□□□ -0.81
UBE2B-204ENST00000504431 KIAA1211Q6ZU35 1233 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms