RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 RASA1P20936 1047 aa16.36■□□□□ 0.21
HOXC6-203ENST00000504315 MAPK4P31152 587 aa16.36■□□□□ 0.21
HOXC6-203ENST00000504315 KIAA1755Q5JYT7 1200 aa16.36■□□□□ 0.21
HOXC6-203ENST00000504315 CLEC10AQ8IUN9 316 aa16.36■□□□□ 0.21
HOXC6-203ENST00000504315 IFNL3Q8IZI9 196 aa16.36■□□□□ 0.21
HOXC6-203ENST00000504315 SOCS4Q8WXH5 440 aa16.36■□□□□ 0.21
HOXC6-203ENST00000504315 SHISA4Q96DD7 197 aa16.36■□□□□ 0.21
HOXC6-203ENST00000504315 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.36■□□□□ 0.21
HOXC6-203ENST00000504315 LNPKQ9C0E8 428 aa16.36■□□□□ 0.21
HOXC6-203ENST00000504315 PORCNQ9H237 461 aa16.36■□□□□ 0.21
HOXC6-203ENST00000504315 SH2D4AQ9H788 454 aa16.36■□□□□ 0.21
HOXC6-203ENST00000504315 VCPKMTQ9H867 229 aa16.36■□□□□ 0.21
HOXC6-203ENST00000504315 FOXP2O15409 715 aa16.35■□□□□ 0.21
HOXC6-203ENST00000504315 MYCP01106 439 aaPredicted RBP16.35■□□□□ 0.21
HOXC6-203ENST00000504315 INHAP05111 366 aa16.35■□□□□ 0.21
HOXC6-203ENST00000504315 GJB1P08034 283 aa16.35■□□□□ 0.21
HOXC6-203ENST00000504315 XRCC5P13010 732 aaKnown RBP16.35■□□□□ 0.21
HOXC6-203ENST00000504315 CCL5P13501 91 aa16.35■□□□□ 0.21
HOXC6-203ENST00000504315 GJA8P48165 433 aa16.35■□□□□ 0.21
HOXC6-203ENST00000504315 NUCB1Q02818 461 aa16.35■□□□□ 0.21
HOXC6-203ENST00000504315 NKX2-3Q8TAU0 364 aa16.35■□□□□ 0.21
HOXC6-203ENST00000504315 USP6NLQ92738 828 aa16.35■□□□□ 0.21
HOXC6-203ENST00000504315 PAGR1Q9BTK6 254 aa16.35■□□□□ 0.21
HOXC6-203ENST00000504315 OSBPL3Q9H4L5 887 aa16.35■□□□□ 0.21
HOXC6-203ENST00000504315 SUPT16HQ9Y5B9 1047 aaKnown RBP16.35■□□□□ 0.21
HOXC6-203ENST00000504315 PLIN4Q96Q06 1357 aa16.35■□□□□ 0.21
HOXC6-203ENST00000504315 WDR46O15213 610 aaKnown RBP16.34■□□□□ 0.21
HOXC6-203ENST00000504315 EEF2P13639 858 aaKnown RBP16.34■□□□□ 0.21
HOXC6-203ENST00000504315 TDO2P48775 406 aa16.34■□□□□ 0.21
HOXC6-203ENST00000504315 COG2Q14746 738 aa16.34■□□□□ 0.21
HOXC6-203ENST00000504315 GPR142Q7Z601 462 aa16.34■□□□□ 0.21
HOXC6-203ENST00000504315 CHD1LQ86WJ1 897 aa16.34■□□□□ 0.21
HOXC6-203ENST00000504315 NACAP1Q9BZK3 213 aa16.34■□□□□ 0.21
HOXC6-203ENST00000504315 RNF208Q9H0X6 261 aa16.34■□□□□ 0.21
HOXC6-203ENST00000504315 UNC93B1Q9H1C4 597 aa16.34■□□□□ 0.21
HOXC6-203ENST00000504315 PAK6Q9NQU5 681 aaPredicted RBP16.34■□□□□ 0.21
HOXC6-203ENST00000504315 BTBD7Q9P203 1132 aa16.34■□□□□ 0.21
HOXC6-203ENST00000504315 IGKV6D-41A0A0C4DH26 115 aa16.33■□□□□ 0.2
HOXC6-203ENST00000504315 MINDY4BA8MYZ0 360 aa16.33■□□□□ 0.2
HOXC6-203ENST00000504315 HMGCRP04035 888 aa16.33■□□□□ 0.2
HOXC6-203ENST00000504315 APPP05067 770 aa16.33■□□□□ 0.2
HOXC6-203ENST00000504315 CAPN2P17655 700 aa16.33■□□□□ 0.2
HOXC6-203ENST00000504315 CCNA1P78396 465 aa16.33■□□□□ 0.2
HOXC6-203ENST00000504315 MORN1Q5T089 497 aa16.33■□□□□ 0.2
HOXC6-203ENST00000504315 PRPF38BQ5VTL8 546 aaKnown RBP16.33■□□□□ 0.2
HOXC6-203ENST00000504315 NUDT12Q9BQG2 462 aa16.33■□□□□ 0.2
HOXC6-203ENST00000504315 ZNF287Q9HBT7 754 aa16.33■□□□□ 0.2
HOXC6-203ENST00000504315 HOXC10Q9NYD6 342 aa16.33■□□□□ 0.2
HOXC6-203ENST00000504315 BIN2Q9UBW5 565 aaPredicted RBP16.33■□□□□ 0.2
HOXC6-203ENST00000504315 SMCHD1A6NHR9 2005 aa16.32■□□□□ 0.2
HOXC6-203ENST00000504315 PLEKHH3Q7Z736 793 aa16.32■□□□□ 0.2
HOXC6-203ENST00000504315 UBE2Q1Q7Z7E8 422 aa16.32■□□□□ 0.2
HOXC6-203ENST00000504315 PLEKHM2Q8IWE5 1019 aa16.32■□□□□ 0.2
HOXC6-203ENST00000504315 MB21D1Q8N884 522 aa16.32■□□□□ 0.2
HOXC6-203ENST00000504315 TRIB2Q92519 343 aa16.32■□□□□ 0.2
HOXC6-203ENST00000504315 TANGO6Q9C0B7 1094 aa16.32■□□□□ 0.2
HOXC6-203ENST00000504315 NAPBQ9H115 298 aa16.32■□□□□ 0.2
HOXC6-203ENST00000504315 MKNK2Q9HBH9 465 aa16.32■□□□□ 0.2
HOXC6-203ENST00000504315 HELLSQ9NRZ9 838 aa16.32■□□□□ 0.2
HOXC6-203ENST00000504315 NYAP2Q9P242 653 aa16.32■□□□□ 0.2
HOXC6-203ENST00000504315 DSG3P32926 999 aa16.31■□□□□ 0.2
HOXC6-203ENST00000504315 PPARAQ07869 468 aa16.31■□□□□ 0.2
HOXC6-203ENST00000504315 MAP3K21Q5TCX8 1036 aa16.31■□□□□ 0.2
HOXC6-203ENST00000504315 B4GALNT3Q6L9W6 998 aa16.31■□□□□ 0.2
HOXC6-203ENST00000504315 CCDC129Q6ZRS4 1044 aa16.31■□□□□ 0.2
HOXC6-203ENST00000504315 SPICE1Q8N0Z3 855 aa16.31■□□□□ 0.2
HOXC6-203ENST00000504315 U2AF1L4Q8WU68 220 aaKnown RBP16.31■□□□□ 0.2
HOXC6-203ENST00000504315 GOPCQ9HD26 462 aa16.31■□□□□ 0.2
HOXC6-203ENST00000504315 ADAMTS5Q9UNA0 930 aa16.31■□□□□ 0.2
HOXC6-203ENST00000504315 SGPL1O95470 568 aa16.3■□□□□ 0.2
HOXC6-203ENST00000504315 CYP2B6P20813 491 aa16.3■□□□□ 0.2
HOXC6-203ENST00000504315 RGS2P41220 211 aa16.3■□□□□ 0.2
HOXC6-203ENST00000504315 GRB14Q14449 540 aa16.3■□□□□ 0.2
HOXC6-203ENST00000504315 ALX1Q15699 326 aa16.3■□□□□ 0.2
HOXC6-203ENST00000504315 CCAR1Q8IX12 1150 aaKnown RBP16.3■□□□□ 0.2
HOXC6-203ENST00000504315 TRMT44Q8IYL2 757 aaKnown RBP16.3■□□□□ 0.2
HOXC6-203ENST00000504315 APBA2Q99767 749 aa16.3■□□□□ 0.2
HOXC6-203ENST00000504315 CRISPLD2Q9H0B8 497 aa16.3■□□□□ 0.2
HOXC6-203ENST00000504315 SYNPO2Q9UMS6 1093 aa16.3■□□□□ 0.2
HOXC6-203ENST00000504315 MCM3APO60318 1980 aa16.29■□□□□ 0.2
HOXC6-203ENST00000504315 ZMYM6O95789 1325 aa16.29■□□□□ 0.2
HOXC6-203ENST00000504315 RPTORQ8N122 1335 aa16.29■□□□□ 0.2
HOXC6-203ENST00000504315 A0A0D9SFI3 127 aa16.29■□□□□ 0.2
HOXC6-203ENST00000504315 SLC15A5A6NIM6 579 aa16.29■□□□□ 0.2
HOXC6-203ENST00000504315 FLOT1O75955 427 aa16.29■□□□□ 0.2
HOXC6-203ENST00000504315 HOXC6P09630 235 aa16.29■□□□□ 0.2
HOXC6-203ENST00000504315 PDE4BQ07343 736 aa16.29■□□□□ 0.2
HOXC6-203ENST00000504315 MAP2K5Q13163 448 aa16.29■□□□□ 0.2
HOXC6-203ENST00000504315 MCMDC2Q4G0Z9 681 aa16.29■□□□□ 0.2
HOXC6-203ENST00000504315 ZNF444Q8N0Y2 327 aaPredicted RBP16.29■□□□□ 0.2
HOXC6-203ENST00000504315 SHCBP1Q8NEM2 672 aa16.29■□□□□ 0.2
HOXC6-203ENST00000504315 MKL1Q969V6 931 aa16.29■□□□□ 0.2
HOXC6-203ENST00000504315 FAM227BQ96M60 508 aa16.29■□□□□ 0.2
HOXC6-203ENST00000504315 MOV10L1Q9BXT6 1211 aaKnown RBP16.29■□□□□ 0.2
HOXC6-203ENST00000504315 SPATC1LQ9H0A9 340 aa16.29■□□□□ 0.2
HOXC6-203ENST00000504315 ANAPC4Q9UJX5 808 aa16.29■□□□□ 0.2
HOXC6-203ENST00000504315 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.29■□□□□ 0.21e-7■■■■□ 24.6
HOXC6-203ENST00000504315 PRDM1O75626 825 aa16.28■□□□□ 0.2
HOXC6-203ENST00000504315 SLC3A2P08195 630 aaKnown RBP16.28■□□□□ 0.2
HOXC6-203ENST00000504315 PTPREP23469 700 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms