RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 PATL2C9JE40 543 aaKnown RBP21.54■■□□□ 1.04
SH3TC1-208ENST00000504223 GJB1P08034 283 aa21.54■■□□□ 1.04
SH3TC1-208ENST00000504223 GNAT2P19087 354 aa21.54■■□□□ 1.04
SH3TC1-208ENST00000504223 RASA1P20936 1047 aa21.54■■□□□ 1.04
SH3TC1-208ENST00000504223 PRPF38BQ5VTL8 546 aaKnown RBP21.54■■□□□ 1.04
SH3TC1-208ENST00000504223 PAGR1Q9BTK6 254 aa21.54■■□□□ 1.04
SH3TC1-208ENST00000504223 UNC93B1Q9H1C4 597 aa21.54■■□□□ 1.04
SH3TC1-208ENST00000504223 PORCNQ9H237 461 aa21.54■■□□□ 1.04
SH3TC1-208ENST00000504223 TMX2Q9Y320 296 aa21.54■■□□□ 1.04
SH3TC1-208ENST00000504223 RABGAP1Q9Y3P9 1069 aa21.54■■□□□ 1.04
SH3TC1-208ENST00000504223 A0A0D9SFI3 127 aa21.53■■□□□ 1.04
SH3TC1-208ENST00000504223 GJA8P48165 433 aa21.53■■□□□ 1.04
SH3TC1-208ENST00000504223 TDO2P48775 406 aa21.53■■□□□ 1.04
SH3TC1-208ENST00000504223 ICA1Q05084 483 aa21.53■■□□□ 1.04
SH3TC1-208ENST00000504223 VPS53Q5VIR6 699 aa21.53■■□□□ 1.04
SH3TC1-208ENST00000504223 FAM227BQ96M60 508 aa21.53■■□□□ 1.04
SH3TC1-208ENST00000504223 RNF208Q9H0X6 261 aa21.53■■□□□ 1.04
SH3TC1-208ENST00000504223 OSBPL3Q9H4L5 887 aa21.53■■□□□ 1.04
SH3TC1-208ENST00000504223 SPDYE16A6NNV3 312 aaPredicted RBP21.52■■□□□ 1.04
SH3TC1-208ENST00000504223 APPP05067 770 aa21.52■■□□□ 1.04
SH3TC1-208ENST00000504223 PDE4AP27815 886 aa21.52■■□□□ 1.04
SH3TC1-208ENST00000504223 MAPK4P31152 587 aa21.52■■□□□ 1.04
SH3TC1-208ENST00000504223 NKX2-3Q8TAU0 364 aa21.52■■□□□ 1.04
SH3TC1-208ENST00000504223 A0A0G2JMZ2 1700 aa21.52■■□□□ 1.03
SH3TC1-208ENST00000504223 GPR142Q7Z601 462 aa21.51■■□□□ 1.03
SH3TC1-208ENST00000504223 USP6NLQ92738 828 aa21.51■■□□□ 1.03
SH3TC1-208ENST00000504223 ARHGEF10LQ9HCE6 1279 aa21.51■■□□□ 1.03
SH3TC1-208ENST00000504223 BTBD7Q9P203 1132 aa21.51■■□□□ 1.03
SH3TC1-208ENST00000504223 TACC3Q9Y6A5 838 aa21.51■■□□□ 1.03
SH3TC1-208ENST00000504223 PRDM1O75626 825 aa21.5■■□□□ 1.03
SH3TC1-208ENST00000504223 EEF2P13639 858 aaKnown RBP21.5■■□□□ 1.03
SH3TC1-208ENST00000504223 NMIQ13287 307 aaPredicted RBP21.5■■□□□ 1.03
SH3TC1-208ENST00000504223 ZNF589Q86UQ0 364 aaPredicted RBP21.5■■□□□ 1.03
SH3TC1-208ENST00000504223 U2AF1L4Q8WU68 220 aaKnown RBP21.5■■□□□ 1.03
SH3TC1-208ENST00000504223 SOCS4Q8WXH5 440 aa21.5■■□□□ 1.03
SH3TC1-208ENST00000504223 LPAR1Q92633 364 aa21.5■■□□□ 1.03
SH3TC1-208ENST00000504223 SH2D4AQ9H788 454 aa21.5■■□□□ 1.03
SH3TC1-208ENST00000504223 VCPKMTQ9H867 229 aa21.5■■□□□ 1.03
SH3TC1-208ENST00000504223 PAK6Q9NQU5 681 aaPredicted RBP21.5■■□□□ 1.03
SH3TC1-208ENST00000504223 MYH4Q9Y623 1939 aa21.5■■□□□ 1.03
SH3TC1-208ENST00000504223 TRIM6-TRIM34B2RNG4 842 aa21.49■■□□□ 1.03
SH3TC1-208ENST00000504223 HMGCRP04035 888 aa21.49■■□□□ 1.03
SH3TC1-208ENST00000504223 XRCC5P13010 732 aaKnown RBP21.49■■□□□ 1.03
SH3TC1-208ENST00000504223 MORN1Q5T089 497 aa21.49■■□□□ 1.03
SH3TC1-208ENST00000504223 UBE2Q1Q7Z7E8 422 aa21.49■■□□□ 1.03
SH3TC1-208ENST00000504223 SPICE1Q8N0Z3 855 aa21.49■■□□□ 1.03
SH3TC1-208ENST00000504223 TRIB2Q92519 343 aa21.49■■□□□ 1.03
SH3TC1-208ENST00000504223 NUDT12Q9BQG2 462 aa21.49■■□□□ 1.03
SH3TC1-208ENST00000504223 KANSL2Q9H9L4 492 aa21.49■■□□□ 1.03
SH3TC1-208ENST00000504223 HELLSQ9NRZ9 838 aa21.49■■□□□ 1.03
SH3TC1-208ENST00000504223 IGKV6D-41A0A0C4DH26 115 aa21.48■■□□□ 1.03
SH3TC1-208ENST00000504223 PPARAQ07869 468 aa21.48■■□□□ 1.03
SH3TC1-208ENST00000504223 TRIM32Q13049 653 aa21.48■■□□□ 1.03
SH3TC1-208ENST00000504223 COG2Q14746 738 aa21.48■■□□□ 1.03
SH3TC1-208ENST00000504223 PLEKHH3Q7Z736 793 aa21.48■■□□□ 1.03
SH3TC1-208ENST00000504223 RILPL2Q969X0 211 aa21.48■■□□□ 1.03
SH3TC1-208ENST00000504223 TANGO6Q9C0B7 1094 aa21.48■■□□□ 1.03
SH3TC1-208ENST00000504223 NAPBQ9H115 298 aa21.48■■□□□ 1.03
SH3TC1-208ENST00000504223 SGPL1O95470 568 aa21.47■■□□□ 1.03
SH3TC1-208ENST00000504223 CYP2B6P20813 491 aa21.47■■□□□ 1.03
SH3TC1-208ENST00000504223 CCNA1P78396 465 aa21.47■■□□□ 1.03
SH3TC1-208ENST00000504223 ATP2B2Q01814 1243 aa21.47■■□□□ 1.03
SH3TC1-208ENST00000504223 NACAP1Q9BZK3 213 aa21.47■■□□□ 1.03
SH3TC1-208ENST00000504223 MKNK2Q9HBH9 465 aa21.47■■□□□ 1.03
SH3TC1-208ENST00000504223 INCENPQ9NQS7 918 aa21.47■■□□□ 1.03
SH3TC1-208ENST00000504223 HOXC10Q9NYD6 342 aa21.47■■□□□ 1.03
SH3TC1-208ENST00000504223 COL11A1P12107 1806 aaPredicted RBP21.47■■□□□ 1.03
SH3TC1-208ENST00000504223 DSG3P32926 999 aa21.46■■□□□ 1.03
SH3TC1-208ENST00000504223 MAP3K21Q5TCX8 1036 aa21.46■■□□□ 1.03
SH3TC1-208ENST00000504223 CCAR1Q8IX12 1150 aaKnown RBP21.46■■□□□ 1.03
SH3TC1-208ENST00000504223 DEFB118Q96PH6 123 aa21.46■■□□□ 1.03
SH3TC1-208ENST00000504223 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.46■■□□□ 1.03
SH3TC1-208ENST00000504223 WDR46O15213 610 aaKnown RBP21.45■■□□□ 1.02
SH3TC1-208ENST00000504223 SDSP20132 328 aa21.45■■□□□ 1.02
SH3TC1-208ENST00000504223 RGS2P41220 211 aa21.45■■□□□ 1.02
SH3TC1-208ENST00000504223 CTDSPL2Q05D32 466 aa21.45■■□□□ 1.02
SH3TC1-208ENST00000504223 MCMDC2Q4G0Z9 681 aa21.45■■□□□ 1.02
SH3TC1-208ENST00000504223 CRISPLD2Q9H0B8 497 aa21.45■■□□□ 1.02
SH3TC1-208ENST00000504223 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.45■■□□□ 1.023e-6■■■■□ 19.8
SH3TC1-208ENST00000504223 APBA2Q99767 749 aa21.44■■□□□ 1.02
SH3TC1-208ENST00000504223 PLIN4Q96Q06 1357 aa21.44■■□□□ 1.02
SH3TC1-208ENST00000504223 FLOT1O75955 427 aa21.43■■□□□ 1.02
SH3TC1-208ENST00000504223 GSPT1P15170 499 aaKnown RBP21.43■■□□□ 1.02
SH3TC1-208ENST00000504223 CAPN2P17655 700 aa21.43■■□□□ 1.02
SH3TC1-208ENST00000504223 PTPREP23469 700 aa21.43■■□□□ 1.02
SH3TC1-208ENST00000504223 MAP2K5Q13163 448 aa21.43■■□□□ 1.02
SH3TC1-208ENST00000504223 ALX1Q15699 326 aa21.43■■□□□ 1.02
SH3TC1-208ENST00000504223 CCL14Q16627 93 aa21.43■■□□□ 1.02
SH3TC1-208ENST00000504223 FAM47AQ5JRC9 791 aa21.43■■□□□ 1.02
SH3TC1-208ENST00000504223 TICAM2Q86XR7 235 aa21.43■■□□□ 1.02
SH3TC1-208ENST00000504223 TRMT44Q8IYL2 757 aaKnown RBP21.43■■□□□ 1.02
SH3TC1-208ENST00000504223 MB21D1Q8N884 522 aa21.43■■□□□ 1.02
SH3TC1-208ENST00000504223 ATG4CQ96DT6 458 aa21.43■■□□□ 1.02
SH3TC1-208ENST00000504223 CEP95Q96GE4 821 aa21.43■■□□□ 1.02
SH3TC1-208ENST00000504223 MOV10L1Q9BXT6 1211 aaKnown RBP21.43■■□□□ 1.02
SH3TC1-208ENST00000504223 SPATC1LQ9H0A9 340 aa21.43■■□□□ 1.02
SH3TC1-208ENST00000504223 ZNF287Q9HBT7 754 aa21.43■■□□□ 1.02
SH3TC1-208ENST00000504223 FBXO28Q9NVF7 368 aa21.43■■□□□ 1.02
SH3TC1-208ENST00000504223 NYAP2Q9P242 653 aa21.43■■□□□ 1.02
SH3TC1-208ENST00000504223 CCDC171Q6TFL3 1326 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms