RNA–Protein interactions for RNA: ENST00000503621.5

CLDND1-209, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-209ENST00000503621 HOXC10Q9NYD6 342 aa20.46■□□□□ 0.87
CLDND1-209ENST00000503621 CCDC178Q5BJE1 867 aa20.45■□□□□ 0.86
CLDND1-209ENST00000503621 FBXO46Q6PJ61 603 aaPredicted RBP20.45■□□□□ 0.86
CLDND1-209ENST00000503621 MFSD6Q6ZSS7 791 aa20.45■□□□□ 0.86
CLDND1-209ENST00000503621 MB21D1Q8N884 522 aa20.45■□□□□ 0.86
CLDND1-209ENST00000503621 IL25Q9H293 177 aa20.45■□□□□ 0.86
CLDND1-209ENST00000503621 ADAMTS5Q9UNA0 930 aa20.45■□□□□ 0.86
CLDND1-209ENST00000503621 RABGAP1Q9Y3P9 1069 aa20.45■□□□□ 0.86
CLDND1-209ENST00000503621 HOXD10P28358 340 aa20.44■□□□□ 0.86
CLDND1-209ENST00000503621 HERVK_113P62684 666 aa20.44■□□□□ 0.86
CLDND1-209ENST00000503621 TFAP4Q01664 338 aa20.44■□□□□ 0.86
CLDND1-209ENST00000503621 OTOP1Q7RTM1 612 aa20.44■□□□□ 0.86
CLDND1-209ENST00000503621 CEP95Q96GE4 821 aa20.44■□□□□ 0.86
CLDND1-209ENST00000503621 NBPF3Q9H094 633 aa20.44■□□□□ 0.86
CLDND1-209ENST00000503621 CNNM2Q9H8M5 875 aa20.44■□□□□ 0.86
CLDND1-209ENST00000503621 U3KPZ7 1027 aaPredicted RBP20.44■□□□□ 0.86
CLDND1-209ENST00000503621 TSPY2A6NKD2 308 aa20.43■□□□□ 0.86
CLDND1-209ENST00000503621 EPB41L2O43491 1005 aaKnown RBP20.43■□□□□ 0.86
CLDND1-209ENST00000503621 PLA2G6O60733 806 aa20.43■□□□□ 0.86
CLDND1-209ENST00000503621 CTDSPL2Q05D32 466 aa20.43■□□□□ 0.86
CLDND1-209ENST00000503621 COG2Q14746 738 aa20.43■□□□□ 0.86
CLDND1-209ENST00000503621 TNS4Q8IZW8 715 aa20.43■□□□□ 0.86
CLDND1-209ENST00000503621 P2RX7Q99572 595 aaKnown RBP20.43■□□□□ 0.86
CLDND1-209ENST00000503621 ESYT1Q9BSJ8 1104 aa20.43■□□□□ 0.86
CLDND1-209ENST00000503621 EFCC1Q9HA90 598 aa20.43■□□□□ 0.86
CLDND1-209ENST00000503621 TACC3Q9Y6A5 838 aa20.43■□□□□ 0.86
CLDND1-209ENST00000503621 RLFQ13129 1914 aa20.43■□□□□ 0.86
CLDND1-209ENST00000503621 PRDM1O75626 825 aa20.42■□□□□ 0.86
CLDND1-209ENST00000503621 RCSD1Q6JBY9 416 aa20.42■□□□□ 0.86
CLDND1-209ENST00000503621 CASC1Q6TDU7 716 aa20.42■□□□□ 0.86
CLDND1-209ENST00000503621 ANKS1AQ92625 1134 aa20.42■□□□□ 0.86
CLDND1-209ENST00000503621 ESR2Q92731 530 aa20.42■□□□□ 0.86
CLDND1-209ENST00000503621 IL17RBQ9NRM6 502 aa20.42■□□□□ 0.86
CLDND1-209ENST00000503621 CPA4Q9UI42 421 aa20.42■□□□□ 0.86
CLDND1-209ENST00000503621 FDX1P10109 184 aa20.41■□□□□ 0.86
CLDND1-209ENST00000503621 DGKZQ13574 1117 aa20.41■□□□□ 0.86
CLDND1-209ENST00000503621 CD99L2Q8TCZ2 262 aa20.41■□□□□ 0.86
CLDND1-209ENST00000503621 GMCL1Q96IK5 515 aa20.41■□□□□ 0.86
CLDND1-209ENST00000503621 MTA3Q9BTC8 594 aa20.41■□□□□ 0.86
CLDND1-209ENST00000503621 KRT23Q9C075 422 aa20.41■□□□□ 0.86
CLDND1-209ENST00000503621 MCOLN1Q9GZU1 580 aa20.41■□□□□ 0.86
CLDND1-209ENST00000503621 RPAP3Q9H6T3 665 aaPredicted RBP20.41■□□□□ 0.86
CLDND1-209ENST00000503621 RBPJLQ9UBG7 517 aa20.41■□□□□ 0.86
CLDND1-209ENST00000503621 MYH4Q9Y623 1939 aa20.41■□□□□ 0.86
CLDND1-209ENST00000503621 F5H6K3 240 aa20.4■□□□□ 0.86
CLDND1-209ENST00000503621 CDC45O75419 566 aa20.4■□□□□ 0.86
CLDND1-209ENST00000503621 FCGRTP55899 365 aa20.4■□□□□ 0.86
CLDND1-209ENST00000503621 KLRC3Q07444 240 aa20.4■□□□□ 0.86
CLDND1-209ENST00000503621 DGKHQ86XP1 1220 aa20.4■□□□□ 0.86
CLDND1-209ENST00000503621 TBC1D10CQ8IV04 446 aa20.4■□□□□ 0.86
CLDND1-209ENST00000503621 GPRC5AQ8NFJ5 357 aa20.4■□□□□ 0.86
CLDND1-209ENST00000503621 CLIP2Q9UDT6 1046 aa20.4■□□□□ 0.86
CLDND1-209ENST00000503621 PTPN22Q9Y2R2 807 aa20.4■□□□□ 0.86
CLDND1-209ENST00000503621 MGAMO43451 1857 aa20.39■□□□□ 0.86
CLDND1-209ENST00000503621 PARP14Q460N5 1801 aa20.39■□□□□ 0.86
CLDND1-209ENST00000503621 A0A0G2JMZ2 1700 aa20.39■□□□□ 0.86
CLDND1-209ENST00000503621 SPDYE16A6NNV3 312 aaPredicted RBP20.39■□□□□ 0.85
CLDND1-209ENST00000503621 RANBP6O60518 1105 aaKnown RBP20.39■□□□□ 0.85
CLDND1-209ENST00000503621 DSG3P32926 999 aa20.39■□□□□ 0.85
CLDND1-209ENST00000503621 PSMC4P43686 418 aa20.39■□□□□ 0.85
CLDND1-209ENST00000503621 IRF5Q13568 498 aa20.39■□□□□ 0.85
CLDND1-209ENST00000503621 KIAA1755Q5JYT7 1200 aa20.39■□□□□ 0.85
CLDND1-209ENST00000503621 KIAA1211Q6ZU35 1233 aa20.39■□□□□ 0.85
CLDND1-209ENST00000503621 ANKRD13CQ8N6S4 541 aa20.39■□□□□ 0.85
CLDND1-209ENST00000503621 HTTP42858 3142 aa20.38■□□□□ 0.85
CLDND1-209ENST00000503621 MAPK4P31152 587 aa20.38■□□□□ 0.85
CLDND1-209ENST00000503621 ERVK-9P63128 1117 aa20.38■□□□□ 0.85
CLDND1-209ENST00000503621 ERVK-24P63145 666 aa20.38■□□□□ 0.85
CLDND1-209ENST00000503621 CCNA1P78396 465 aa20.38■□□□□ 0.85
CLDND1-209ENST00000503621 PTH1RQ03431 593 aa20.38■□□□□ 0.85
CLDND1-209ENST00000503621 FAM47AQ5JRC9 791 aa20.38■□□□□ 0.85
CLDND1-209ENST00000503621 POTEEQ6S8J3 1075 aa20.38■□□□□ 0.85
CLDND1-209ENST00000503621 IQCA1Q86XH1 822 aa20.38■□□□□ 0.85
CLDND1-209ENST00000503621 CLEC10AQ8IUN9 316 aa20.38■□□□□ 0.85
CLDND1-209ENST00000503621 SHCBP1Q8NEM2 672 aa20.38■□□□□ 0.85
CLDND1-209ENST00000503621 TRIM47Q96LD4 638 aa20.38■□□□□ 0.85
CLDND1-209ENST00000503621 LSG1Q9H089 658 aaKnown RBP20.38■□□□□ 0.85
CLDND1-209ENST00000503621 SRRDQ9UH36 339 aa20.38■□□□□ 0.85
CLDND1-209ENST00000503621 TRIM17Q9Y577 477 aa20.38■□□□□ 0.85
CLDND1-209ENST00000503621 ATP2A1O14983 1001 aa20.37■□□□□ 0.85
CLDND1-209ENST00000503621 NDUFB10O96000 172 aa20.37■□□□□ 0.85
CLDND1-209ENST00000503621 CYP21A2P08686 494 aa20.37■□□□□ 0.85
CLDND1-209ENST00000503621 TOP1P11387 765 aaKnown RBP20.37■□□□□ 0.85
CLDND1-209ENST00000503621 HAND2P61296 217 aa20.37■□□□□ 0.85
CLDND1-209ENST00000503621 CAP1Q01518 475 aa20.37■□□□□ 0.85
CLDND1-209ENST00000503621 ZYXQ15942 572 aaKnown RBP20.37■□□□□ 0.85
CLDND1-209ENST00000503621 TSGA10IPQ3SY00 556 aa20.37■□□□□ 0.85
CLDND1-209ENST00000503621 CTGFP29279 349 aa20.36■□□□□ 0.85
CLDND1-209ENST00000503621 COPB2P35606 906 aa20.36■□□□□ 0.85
CLDND1-209ENST00000503621 NECTIN1Q15223 517 aa20.36■□□□□ 0.85
CLDND1-209ENST00000503621 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.36■□□□□ 0.85
CLDND1-209ENST00000503621 PRPF38AQ8NAV1 312 aaKnown RBP20.36■□□□□ 0.85
CLDND1-209ENST00000503621 ARMC5Q96C12 935 aa20.36■□□□□ 0.85
CLDND1-209ENST00000503621 ABHD8Q96I13 439 aa20.36■□□□□ 0.85
CLDND1-209ENST00000503621 TXNRD2Q9NNW7 524 aa20.36■□□□□ 0.85
CLDND1-209ENST00000503621 INCENPQ9NQS7 918 aa20.36■□□□□ 0.85
CLDND1-209ENST00000503621 FEM1BQ9UK73 627 aa20.36■□□□□ 0.85
CLDND1-209ENST00000503621 PPP1R9AQ9ULJ8 1098 aa20.36■□□□□ 0.85
CLDND1-209ENST00000503621 NEDD4P46934 1319 aa20.35■□□□□ 0.85
CLDND1-209ENST00000503621 CNMDO75829 334 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms