RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 SPECC1LQ69YQ0 1117 aa18.66■□□□□ 0.58
COL6A1-206ENST00000498614 TRMT44Q8IYL2 757 aaKnown RBP18.66■□□□□ 0.58
COL6A1-206ENST00000498614 TMTC2Q8N394 836 aa18.66■□□□□ 0.58
COL6A1-206ENST00000498614 OXER1Q8TDS5 423 aa18.66■□□□□ 0.58
COL6A1-206ENST00000498614 SMARCE1Q969G3 411 aa18.66■□□□□ 0.58
COL6A1-206ENST00000498614 DHX58Q96C10 678 aa18.66■□□□□ 0.58
COL6A1-206ENST00000498614 TRERF1Q96PN7 1200 aa18.66■□□□□ 0.58
COL6A1-206ENST00000498614 PARD6BQ9BYG5 372 aa18.66■□□□□ 0.58
COL6A1-206ENST00000498614 NFE2L3Q9Y4A8 694 aa18.66■□□□□ 0.58
COL6A1-206ENST00000498614 CCDC196A0A1B0GTZ2 297 aa18.66■□□□□ 0.58
COL6A1-206ENST00000498614 TULP2O00295 520 aa18.66■□□□□ 0.58
COL6A1-206ENST00000498614 ZNF18P17022 549 aa18.66■□□□□ 0.58
COL6A1-206ENST00000498614 SMC1AQ14683 1233 aaKnown RBP18.66■□□□□ 0.58
COL6A1-206ENST00000498614 KARSQ15046 597 aaKnown RBP18.66■□□□□ 0.58
COL6A1-206ENST00000498614 CLEC4GQ6UXB4 293 aa18.66■□□□□ 0.58
COL6A1-206ENST00000498614 AKT1S1Q96B36 256 aa18.66■□□□□ 0.58
COL6A1-206ENST00000498614 RIOK1Q9BRS2 568 aaKnown RBP18.66■□□□□ 0.58
COL6A1-206ENST00000498614 GNL3LQ9NVN8 582 aaKnown RBP18.66■□□□□ 0.58
COL6A1-206ENST00000498614 PCDHB6Q9Y5E3 794 aa18.66■□□□□ 0.58
COL6A1-206ENST00000498614 BAZ2AQ9UIF9 1905 aaKnown RBP18.65■□□□□ 0.58
COL6A1-206ENST00000498614 A0A1B0GUL6 1792 aa18.65■□□□□ 0.58
COL6A1-206ENST00000498614 CAPN2P17655 700 aa18.65■□□□□ 0.58
COL6A1-206ENST00000498614 ESR2Q92731 530 aa18.65■□□□□ 0.58
COL6A1-206ENST00000498614 FOXP1Q9H334 677 aaPredicted RBP18.65■□□□□ 0.58
COL6A1-206ENST00000498614 MYH2Q9UKX2 1941 aa18.65■□□□□ 0.58
COL6A1-206ENST00000498614 PRDM1O75626 825 aa18.64■□□□□ 0.58
COL6A1-206ENST00000498614 CDK11BP21127 795 aaKnown RBP18.64■□□□□ 0.58
COL6A1-206ENST00000498614 SEC23AQ15436 765 aa18.64■□□□□ 0.58
COL6A1-206ENST00000498614 COL23A1Q86Y22 540 aaPredicted RBP18.64■□□□□ 0.58
COL6A1-206ENST00000498614 FBXO2Q9UK22 296 aaPredicted RBP18.64■□□□□ 0.58
COL6A1-206ENST00000498614 CACNA1SQ13698 1873 aa18.64■□□□□ 0.58
COL6A1-206ENST00000498614 MYH6P13533 1939 aa18.64■□□□□ 0.57
COL6A1-206ENST00000498614 UBR3Q6ZT12 1888 aa18.64■□□□□ 0.57
COL6A1-206ENST00000498614 MTF1Q14872 753 aa18.64■□□□□ 0.57
COL6A1-206ENST00000498614 POSTNQ15063 836 aa18.64■□□□□ 0.57
COL6A1-206ENST00000498614 CAVIN4Q5BKX8 364 aa18.64■□□□□ 0.57
COL6A1-206ENST00000498614 RILPL1Q5EBL4 403 aa18.64■□□□□ 0.57
COL6A1-206ENST00000498614 GRAMD1CQ8IYS0 662 aa18.64■□□□□ 0.57
COL6A1-206ENST00000498614 CELF1Q92879 486 aaKnown RBP18.64■□□□□ 0.57
COL6A1-206ENST00000498614 MED15Q96RN5 788 aa18.64■□□□□ 0.57
COL6A1-206ENST00000498614 SETDB2Q96T68 719 aa18.64■□□□□ 0.57
COL6A1-206ENST00000498614 MTA3Q9BTC8 594 aa18.64■□□□□ 0.57
COL6A1-206ENST00000498614 MRPL44Q9H9J2 332 aaKnown RBP18.64■□□□□ 0.57
COL6A1-206ENST00000498614 ARFGAP3Q9NP61 516 aa18.64■□□□□ 0.57
COL6A1-206ENST00000498614 MINPP1Q9UNW1 487 aa18.64■□□□□ 0.57
COL6A1-206ENST00000498614 CASZ1Q86V15 1759 aa18.64■□□□□ 0.57
COL6A1-206ENST00000498614 hCG_1642624A0A1W2PR95 340 aa18.63■□□□□ 0.57
COL6A1-206ENST00000498614 GYS1P13807 737 aa18.63■□□□□ 0.57
COL6A1-206ENST00000498614 UBE4AQ14139 1066 aa18.63■□□□□ 0.57
COL6A1-206ENST00000498614 RABGGTAQ92696 567 aa18.63■□□□□ 0.57
COL6A1-206ENST00000498614 FUT8Q9BYC5 575 aa18.63■□□□□ 0.57
COL6A1-206ENST00000498614 IRX2Q9BZI1 471 aaPredicted RBP18.63■□□□□ 0.57
COL6A1-206ENST00000498614 BSDC1Q9NW68 430 aaPredicted RBP18.63■□□□□ 0.57
COL6A1-206ENST00000498614 ANAPC4Q9UJX5 808 aa18.63■□□□□ 0.57
COL6A1-206ENST00000498614 PTPREP23469 700 aa18.63■□□□□ 0.57
COL6A1-206ENST00000498614 ENAHQ8N8S7 591 aaPredicted RBP18.63■□□□□ 0.57
COL6A1-206ENST00000498614 ZNF384Q8TF68 577 aa18.63■□□□□ 0.57
COL6A1-206ENST00000498614 SHISA4Q96DD7 197 aa18.63■□□□□ 0.57
COL6A1-206ENST00000498614 CABP5Q9NP86 173 aa18.63■□□□□ 0.57
COL6A1-206ENST00000498614 SAMSN1Q9NSI8 373 aaKnown RBP18.63■□□□□ 0.57
COL6A1-206ENST00000498614 SERTAD1Q9UHV2 236 aa18.63■□□□□ 0.57
COL6A1-206ENST00000498614 POLR2DO15514 142 aaKnown RBP18.62■□□□□ 0.57
COL6A1-206ENST00000498614 BAG6P46379 1132 aa18.62■□□□□ 0.57
COL6A1-206ENST00000498614 SF3B3Q15393 1217 aaKnown RBP18.62■□□□□ 0.57
COL6A1-206ENST00000498614 ENOX1Q8TC92 643 aaKnown RBP18.62■□□□□ 0.57
COL6A1-206ENST00000498614 GOLGA1Q92805 767 aa18.62■□□□□ 0.57
COL6A1-206ENST00000498614 FAM84BQ96KN1 310 aaPredicted RBP18.62■□□□□ 0.57
COL6A1-206ENST00000498614 VPS54Q9P1Q0 977 aa18.62■□□□□ 0.57
COL6A1-206ENST00000498614 FAM205CA6NFA0 338 aa18.62■□□□□ 0.57
COL6A1-206ENST00000498614 KLRK1P26718 216 aa18.62■□□□□ 0.57
COL6A1-206ENST00000498614 RCAN1P53805 252 aa18.62■□□□□ 0.57
COL6A1-206ENST00000498614 NFIXQ14938 502 aa18.62■□□□□ 0.57
COL6A1-206ENST00000498614 TXLNBQ8N3L3 684 aa18.62■□□□□ 0.57
COL6A1-206ENST00000498614 CCDC12Q8WUD4 166 aaPredicted RBP18.62■□□□□ 0.57
COL6A1-206ENST00000498614 ZSCAN10Q96SZ4 725 aaPredicted RBP18.62■□□□□ 0.57
COL6A1-206ENST00000498614 PDGFDQ9GZP0 370 aaPredicted RBP18.62■□□□□ 0.57
COL6A1-206ENST00000498614 DUOX1Q9NRD9 1551 aa18.62■□□□□ 0.57
COL6A1-206ENST00000498614 SARSP49591 514 aaKnown RBP18.61■□□□□ 0.57
COL6A1-206ENST00000498614 GYS2P54840 703 aa18.61■□□□□ 0.57
COL6A1-206ENST00000498614 AKAP17AQ02040 695 aaKnown RBP18.61■□□□□ 0.57
COL6A1-206ENST00000498614 EVX2Q03828 476 aa18.61■□□□□ 0.57
COL6A1-206ENST00000498614 MORC3Q14149 939 aa18.61■□□□□ 0.57
COL6A1-206ENST00000498614 ELOA2Q8IYF1 753 aaPredicted RBP18.61■□□□□ 0.57
COL6A1-206ENST00000498614 MLKLQ8NB16 471 aa18.61■□□□□ 0.57
COL6A1-206ENST00000498614 ZSWIM4Q9H7M6 989 aa18.61■□□□□ 0.57
COL6A1-206ENST00000498614 HOOK1Q9UJC3 728 aaKnown RBP18.61■□□□□ 0.57
COL6A1-206ENST00000498614 SOWAHDA6NJG2 315 aa18.61■□□□□ 0.57
COL6A1-206ENST00000498614 IFIT1BQ5T764 474 aaKnown RBP18.61■□□□□ 0.57
COL6A1-206ENST00000498614 NT5DC1Q5TFE4 455 aa18.61■□□□□ 0.57
COL6A1-206ENST00000498614 RNF26Q9BY78 433 aaPredicted RBP18.61■□□□□ 0.57
COL6A1-206ENST00000498614 SCN7AQ01118 1682 aa18.61■□□□□ 0.57
COL6A1-206ENST00000498614 A0A0U1RQJ8 604 aa18.6■□□□□ 0.57
COL6A1-206ENST00000498614 PLEKHA8P1O95397 391 aa18.6■□□□□ 0.57
COL6A1-206ENST00000498614 ADRA2BP18089 450 aa18.6■□□□□ 0.57
COL6A1-206ENST00000498614 TXLNAP40222 546 aa18.6■□□□□ 0.57
COL6A1-206ENST00000498614 NR1I3Q14994 352 aa18.6■□□□□ 0.57
COL6A1-206ENST00000498614 MSL1Q68DK7 614 aa18.6■□□□□ 0.57
COL6A1-206ENST00000498614 NBPF5PQ86XG9 351 aaPredicted RBP18.6■□□□□ 0.57
COL6A1-206ENST00000498614 ATRIPQ8WXE1 791 aa18.6■□□□□ 0.57
COL6A1-206ENST00000498614 RAD51AP2Q09MP3 1159 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms