RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 C10orf71Q711Q0 1435 aa7.16□□□□□ -1.26
SSBP1-213ENST00000496622 ZBTB24O43167 697 aaPredicted RBP7.16□□□□□ -1.26
SSBP1-213ENST00000496622 EPB41L2O43491 1005 aaKnown RBP7.16□□□□□ -1.26
SSBP1-213ENST00000496622 PSMA5P28066 241 aa7.16□□□□□ -1.26
SSBP1-213ENST00000496622 GTF2A1P52655 376 aaPredicted RBP7.16□□□□□ -1.26
SSBP1-213ENST00000496622 DYNLL1P63167 89 aaKnown RBP7.16□□□□□ -1.26
SSBP1-213ENST00000496622 NUCB2P80303 420 aa7.16□□□□□ -1.26
SSBP1-213ENST00000496622 CBX1P83916 185 aa7.16□□□□□ -1.26
SSBP1-213ENST00000496622 GRIK5Q16478 980 aa7.16□□□□□ -1.26
SSBP1-213ENST00000496622 TBC1D10CQ8IV04 446 aa7.16□□□□□ -1.26
SSBP1-213ENST00000496622 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.16□□□□□ -1.26
SSBP1-213ENST00000496622 BAP1Q92560 729 aa7.16□□□□□ -1.26
SSBP1-213ENST00000496622 GBP4Q96PP9 640 aa7.16□□□□□ -1.26
SSBP1-213ENST00000496622 DSCC1Q9BVC3 393 aa7.16□□□□□ -1.26
SSBP1-213ENST00000496622 EPB41L4AQ9HCS5 686 aaPredicted RBP7.16□□□□□ -1.26
SSBP1-213ENST00000496622 DDX49Q9Y6V7 483 aaKnown RBP7.16□□□□□ -1.26
SSBP1-213ENST00000496622 TULP2O00295 520 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 F12P00748 615 aaPredicted RBP7.15□□□□□ -1.26
SSBP1-213ENST00000496622 USP17L8P0C7I0 530 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 SCRN1Q12765 414 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 SF3A1Q15459 793 aaKnown RBP7.15□□□□□ -1.26
SSBP1-213ENST00000496622 TMCO4Q5TGY1 634 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 CCDC181Q5TID7 509 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 CCDC144CPQ8IYA2 1237 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 STRBPQ96SI9 672 aaKnown RBP7.15□□□□□ -1.26
SSBP1-213ENST00000496622 ZKSCAN3Q9BRR0 538 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.15□□□□□ -1.26
SSBP1-213ENST00000496622 NYXQ9GZU5 481 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 PPME1Q9Y570 386 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 NHSQ6T4R5 1651 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 COL1A1P02452 1464 aaPredicted RBP7.15□□□□□ -1.26
SSBP1-213ENST00000496622 B4E1Z4 1266 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 UBE2Q2LH0YL09 131 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 ZNF213O14771 459 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 STX6O43752 255 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 GADD45BO75293 160 aaPredicted RBP7.15□□□□□ -1.26
SSBP1-213ENST00000496622 PRDM1O75626 825 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 UQCRFS1P1P0C7P4 283 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 GUCY1B3Q02153 619 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 MAP3K12Q12852 859 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 TSGA10IPQ3SY00 556 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 CAVIN4Q5BKX8 364 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 RRP12Q5JTH9 1297 aaKnown RBP7.15□□□□□ -1.26
SSBP1-213ENST00000496622 PPP2R2DQ66LE6 453 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 CDC37L1Q7L3B6 337 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 DHX32Q7L7V1 743 aaKnown RBP7.15□□□□□ -1.26
SSBP1-213ENST00000496622 INTS4Q96HW7 963 aaKnown RBP7.15□□□□□ -1.26
SSBP1-213ENST00000496622 MYL10Q9BUA6 226 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 TSPYL1Q9H0U9 437 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 TOMM22Q9NS69 142 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 DONSONQ9NYP3 566 aa7.15□□□□□ -1.26
SSBP1-213ENST00000496622 ZNF804BA4D1E1 1349 aa7.15□□□□□ -1.27
SSBP1-213ENST00000496622 PLSCR1O15162 318 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 CYP7A1P22680 504 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 ANTXR2P58335 489 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 ZRSR2Q15696 482 aaKnown RBP7.14□□□□□ -1.27
SSBP1-213ENST00000496622 IMMTQ16891 758 aaKnown RBP7.14□□□□□ -1.27
SSBP1-213ENST00000496622 OTUD7BQ6GQQ9 843 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 DESI1Q6ICB0 168 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 GAS2L3Q86XJ1 694 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 GPT2Q8TD30 523 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 LMBRD1Q9NUN5 540 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 PKD2L1Q9P0L9 805 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 CNPY2Q9Y2B0 182 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 V9GY48 417 aaPredicted RBP7.14□□□□□ -1.27
SSBP1-213ENST00000496622 GSG1L2A8MUP6 293 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 MINDY4BA8MYZ0 360 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 POLRMTO00411 1230 aaKnown RBP7.14□□□□□ -1.27
SSBP1-213ENST00000496622 COQ9O75208 318 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 ZFYP08048 801 aaPredicted RBP7.14□□□□□ -1.27
SSBP1-213ENST00000496622 PAX7P23759 505 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 HIBADHP31937 336 aaKnown RBP7.14□□□□□ -1.27
SSBP1-213ENST00000496622 UBE4AQ14139 1066 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 TTF1Q15361 905 aaPredicted RBP7.14□□□□□ -1.27
SSBP1-213ENST00000496622 UBE3CQ15386 1083 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 MFSD4BQ5TF39 518 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 LARP1BQ659C4 914 aaKnown RBP7.14□□□□□ -1.27
SSBP1-213ENST00000496622 CAVIN1Q6NZI2 390 aaKnown RBP7.14□□□□□ -1.27
SSBP1-213ENST00000496622 CYB5R4Q7L1T6 521 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 ZNF771Q7L3S4 317 aaPredicted RBP7.14□□□□□ -1.27
SSBP1-213ENST00000496622 IFNL3Q8IZI9 196 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 RPGRQ92834 1020 aaKnown RBP7.14□□□□□ -1.27
SSBP1-213ENST00000496622 MKL1Q969V6 931 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 TIGD1Q96MW7 591 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 PAIP2Q9BPZ3 127 aaKnown RBP7.14□□□□□ -1.27
SSBP1-213ENST00000496622 GOPCQ9HD26 462 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 AATFQ9NY61 560 aaKnown RBP eCLIP7.14□□□□□ -1.27
SSBP1-213ENST00000496622 SLC4A4Q9Y6R1 1079 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 CCDC189A1A4V9 331 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 FIBPO43427 364 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 MMP10P09238 476 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 SH3BP2P78314 561 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 EXOSC10Q01780 885 aaKnown RBP7.14□□□□□ -1.27
SSBP1-213ENST00000496622 DNM1Q05193 864 aaKnown RBP7.14□□□□□ -1.27
SSBP1-213ENST00000496622 KRBA2Q6ZNG9 492 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 ZNF598Q86UK7 904 aaKnown RBP7.14□□□□□ -1.27
SSBP1-213ENST00000496622 CCDC82Q8N4S0 544 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 ACRBPQ8NEB7 543 aa7.14□□□□□ -1.27
SSBP1-213ENST00000496622 ZNF512BQ96KM6 892 aaPredicted RBP7.14□□□□□ -1.27
SSBP1-213ENST00000496622 PANK2Q9BZ23 570 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms