RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 GDF15Q99988 308 aa12.41□□□□□ -0.42
NUDCD3-210ENST00000493613 TANGO6Q9C0B7 1094 aa12.41□□□□□ -0.42
NUDCD3-210ENST00000493613 ARMT1Q9H993 441 aa12.41□□□□□ -0.42
NUDCD3-210ENST00000493613 A0A1W2PRG0 241 aa12.4□□□□□ -0.42
NUDCD3-210ENST00000493613 SOX1O00570 391 aaPredicted RBP12.4□□□□□ -0.42
NUDCD3-210ENST00000493613 CYP2D6P10635 497 aa12.4□□□□□ -0.42
NUDCD3-210ENST00000493613 COL6A1P12109 1028 aa12.4□□□□□ -0.42
NUDCD3-210ENST00000493613 BMP8BP34820 402 aa12.4□□□□□ -0.42
NUDCD3-210ENST00000493613 ADD2P35612 726 aa12.4□□□□□ -0.42
NUDCD3-210ENST00000493613 GRB14Q14449 540 aa12.4□□□□□ -0.42
NUDCD3-210ENST00000493613 COG2Q14746 738 aa12.4□□□□□ -0.42
NUDCD3-210ENST00000493613 MFSD14CQ5VZR4 134 aa12.4□□□□□ -0.42
NUDCD3-210ENST00000493613 TMEM179Q6ZVK1 233 aa12.4□□□□□ -0.42
NUDCD3-210ENST00000493613 SLC44A5Q8NCS7 719 aa12.4□□□□□ -0.42
NUDCD3-210ENST00000493613 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.4□□□□□ -0.42
NUDCD3-210ENST00000493613 CHMP4BQ9H444 224 aaKnown RBP12.4□□□□□ -0.42
NUDCD3-210ENST00000493613 FLRT1Q9NZU1 646 aa12.4□□□□□ -0.42
NUDCD3-210ENST00000493613 SWAP70Q9UH65 585 aa12.4□□□□□ -0.42
NUDCD3-210ENST00000493613 SMCHD1A6NHR9 2005 aa12.39□□□□□ -0.43
NUDCD3-210ENST00000493613 MBD4O95243 580 aa12.39□□□□□ -0.43
NUDCD3-210ENST00000493613 HOXC6P09630 235 aa12.39□□□□□ -0.43
NUDCD3-210ENST00000493613 ATP5JP18859 108 aa12.39□□□□□ -0.43
NUDCD3-210ENST00000493613 ATP2B2Q01814 1243 aa12.39□□□□□ -0.43
NUDCD3-210ENST00000493613 SLFNL1Q499Z3 407 aa12.39□□□□□ -0.43
NUDCD3-210ENST00000493613 DYNLL2Q96FJ2 89 aa12.39□□□□□ -0.43
NUDCD3-210ENST00000493613 LRCH3Q96II8 777 aa12.39□□□□□ -0.43
NUDCD3-210ENST00000493613 BOLA2Q9H3K6 86 aa12.39□□□□□ -0.43
NUDCD3-210ENST00000493613 ATP8A2Q9NTI2 1148 aa12.39□□□□□ -0.43
NUDCD3-210ENST00000493613 HOXC10Q9NYD6 342 aa12.39□□□□□ -0.43
NUDCD3-210ENST00000493613 RCAN3Q9UKA8 241 aa12.39□□□□□ -0.43
NUDCD3-210ENST00000493613 PRKAB2O43741 272 aa12.38□□□□□ -0.43
NUDCD3-210ENST00000493613 CNGA1P29973 690 aa12.38□□□□□ -0.43
NUDCD3-210ENST00000493613 CYP2C19P33261 490 aa12.38□□□□□ -0.43
NUDCD3-210ENST00000493613 MAGEA10P43363 369 aaPredicted RBP12.38□□□□□ -0.43
NUDCD3-210ENST00000493613 CLEC10AQ8IUN9 316 aa12.38□□□□□ -0.43
NUDCD3-210ENST00000493613 AMOTL1Q8IY63 956 aa12.38□□□□□ -0.43
NUDCD3-210ENST00000493613 NPLOC4Q8TAT6 608 aa12.38□□□□□ -0.43
NUDCD3-210ENST00000493613 HAUS7Q99871 368 aa12.38□□□□□ -0.43
NUDCD3-210ENST00000493613 MOV10L1Q9BXT6 1211 aaKnown RBP12.38□□□□□ -0.43
NUDCD3-210ENST00000493613 SH2D4AQ9H788 454 aa12.38□□□□□ -0.43
NUDCD3-210ENST00000493613 ARHGEF10LQ9HCE6 1279 aa12.38□□□□□ -0.43
NUDCD3-210ENST00000493613 CYP2D7A0A087X1C5 515 aa12.37□□□□□ -0.43
NUDCD3-210ENST00000493613 STRNO43815 780 aa12.37□□□□□ -0.43
NUDCD3-210ENST00000493613 MSCO60682 206 aa12.37□□□□□ -0.43
NUDCD3-210ENST00000493613 FLOT1O75955 427 aa12.37□□□□□ -0.43
NUDCD3-210ENST00000493613 AKR1B1P15121 316 aa12.37□□□□□ -0.43
NUDCD3-210ENST00000493613 ADORA2AP29274 412 aa12.37□□□□□ -0.43
NUDCD3-210ENST00000493613 ICA1Q05084 483 aa12.37□□□□□ -0.43
NUDCD3-210ENST00000493613 PLS1Q14651 629 aa12.37□□□□□ -0.43
NUDCD3-210ENST00000493613 LRRC26Q2I0M4 334 aa12.37□□□□□ -0.43
NUDCD3-210ENST00000493613 KIAA1755Q5JYT7 1200 aa12.37□□□□□ -0.43
NUDCD3-210ENST00000493613 DPP9Q86TI2 863 aa12.37□□□□□ -0.43
NUDCD3-210ENST00000493613 SPICE1Q8N0Z3 855 aa12.37□□□□□ -0.43
NUDCD3-210ENST00000493613 LPAR1Q92633 364 aa12.37□□□□□ -0.43
NUDCD3-210ENST00000493613 DDRGK1Q96HY6 314 aa12.37□□□□□ -0.43
NUDCD3-210ENST00000493613 LRRCC1Q9C099 1032 aa12.37□□□□□ -0.43
NUDCD3-210ENST00000493613 SPATC1LQ9H0A9 340 aa12.37□□□□□ -0.43
NUDCD3-210ENST00000493613 DDX20Q9UHI6 824 aaKnown RBP12.37□□□□□ -0.43
NUDCD3-210ENST00000493613 TMX2Q9Y320 296 aa12.37□□□□□ -0.43
NUDCD3-210ENST00000493613 USP17L12C9JPN9 530 aa12.36□□□□□ -0.43
NUDCD3-210ENST00000493613 USP17L21D6R901 530 aa12.36□□□□□ -0.43
NUDCD3-210ENST00000493613 CHGBP05060 677 aa12.36□□□□□ -0.43
NUDCD3-210ENST00000493613 ERCC3P19447 782 aa12.36□□□□□ -0.43
NUDCD3-210ENST00000493613 CDK8P49336 464 aa12.36□□□□□ -0.43
NUDCD3-210ENST00000493613 UBE3CQ15386 1083 aa12.36□□□□□ -0.43
NUDCD3-210ENST00000493613 C12orf60Q5U649 245 aa12.36□□□□□ -0.43
NUDCD3-210ENST00000493613 ZSCAN25Q6NSZ9 544 aa12.36□□□□□ -0.43
NUDCD3-210ENST00000493613 SIAH1Q8IUQ4 282 aa12.36□□□□□ -0.43
NUDCD3-210ENST00000493613 TDHQ8IZJ6 230 aa12.36□□□□□ -0.43
NUDCD3-210ENST00000493613 MB21D1Q8N884 522 aa12.36□□□□□ -0.43
NUDCD3-210ENST00000493613 SHCBP1Q8NEM2 672 aa12.36□□□□□ -0.43
NUDCD3-210ENST00000493613 CCDC17Q96LX7 622 aa12.36□□□□□ -0.43
NUDCD3-210ENST00000493613 UBE2OQ9C0C9 1292 aaKnown RBP12.36□□□□□ -0.43
NUDCD3-210ENST00000493613 SENP6Q9GZR1 1112 aaPredicted RBP12.36□□□□□ -0.43
NUDCD3-210ENST00000493613 VCPKMTQ9H867 229 aa12.36□□□□□ -0.43
NUDCD3-210ENST00000493613 MCM3APO60318 1980 aa12.36□□□□□ -0.43
NUDCD3-210ENST00000493613 SMIM22K7EJ46 135 aa12.35□□□□□ -0.43
NUDCD3-210ENST00000493613 WDR46O15213 610 aaKnown RBP12.35□□□□□ -0.43
NUDCD3-210ENST00000493613 CYBAP13498 195 aa12.35□□□□□ -0.43
NUDCD3-210ENST00000493613 DSG3P32926 999 aa12.35□□□□□ -0.43
NUDCD3-210ENST00000493613 C20orf194Q5TEA3 1177 aa12.35□□□□□ -0.43
NUDCD3-210ENST00000493613 OLFML2BQ68BL8 750 aa12.35□□□□□ -0.43
NUDCD3-210ENST00000493613 SAMD1Q6SPF0 538 aaPredicted RBP12.35□□□□□ -0.43
NUDCD3-210ENST00000493613 C16orf86Q6ZW13 317 aa12.35□□□□□ -0.43
NUDCD3-210ENST00000493613 NCAPG2Q86XI2 1143 aa12.35□□□□□ -0.43
NUDCD3-210ENST00000493613 TRPV1Q8NER1 839 aa12.35□□□□□ -0.43
NUDCD3-210ENST00000493613 ATG4CQ96DT6 458 aa12.35□□□□□ -0.43
NUDCD3-210ENST00000493613 MROH8Q9H579 483 aa12.35□□□□□ -0.43
NUDCD3-210ENST00000493613 SLC4A4Q9Y6R1 1079 aa12.35□□□□□ -0.43
NUDCD3-210ENST00000493613 UNC80Q8N2C7 3258 aa12.35□□□□□ -0.43
NUDCD3-210ENST00000493613 DNM1LO00429 736 aa12.34□□□□□ -0.43
NUDCD3-210ENST00000493613 SMARCA5O60264 1052 aaPredicted RBP12.34□□□□□ -0.43
NUDCD3-210ENST00000493613 IGHA2P01877 340 aa12.34□□□□□ -0.43
NUDCD3-210ENST00000493613 EEF2P13639 858 aaKnown RBP12.34□□□□□ -0.43
NUDCD3-210ENST00000493613 LRIT3Q3SXY7 679 aa12.34□□□□□ -0.43
NUDCD3-210ENST00000493613 GPR153Q6NV75 609 aa12.34□□□□□ -0.43
NUDCD3-210ENST00000493613 PUS7LQ9H0K6 701 aaKnown RBP12.34□□□□□ -0.43
NUDCD3-210ENST00000493613 SLC5A4Q9NY91 659 aa12.34□□□□□ -0.43
NUDCD3-210ENST00000493613 COBLO75128 1261 aa12.33□□□□□ -0.44
NUDCD3-210ENST00000493613 FCER1AP12319 257 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms