RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 BUB1BO60566 1050 aaPredicted RBP6.42□□□□□ -1.38
SYCP1-208ENST00000493377 FAM13AO94988 1023 aa6.42□□□□□ -1.38
SYCP1-208ENST00000493377 DTHD1Q6ZMT9 781 aa6.42□□□□□ -1.38
SYCP1-208ENST00000493377 ELMO3Q96BJ8 720 aa6.42□□□□□ -1.38
SYCP1-208ENST00000493377 Q96M66 194 aa6.42□□□□□ -1.38
SYCP1-208ENST00000493377 SPATA25Q9BR10 227 aa6.42□□□□□ -1.38
SYCP1-208ENST00000493377 ZNF747Q9BV97 191 aa6.42□□□□□ -1.38
SYCP1-208ENST00000493377 VPS11Q9H270 941 aa6.42□□□□□ -1.38
SYCP1-208ENST00000493377 CBX8Q9HC52 389 aa6.42□□□□□ -1.38
SYCP1-208ENST00000493377 INHBEP58166 350 aa6.41□□□□□ -1.38
SYCP1-208ENST00000493377 KLF10Q13118 480 aa6.41□□□□□ -1.38
SYCP1-208ENST00000493377 NKG7Q16617 165 aa6.41□□□□□ -1.38
SYCP1-208ENST00000493377 TSC22D4Q9Y3Q8 395 aa6.41□□□□□ -1.38
SYCP1-208ENST00000493377 EFEMP2O95967 443 aa6.4□□□□□ -1.38
SYCP1-208ENST00000493377 CST3P01034 146 aaPredicted RBP6.4□□□□□ -1.38
SYCP1-208ENST00000493377 ERVFRD-1P60508 538 aa6.4□□□□□ -1.38
SYCP1-208ENST00000493377 TMEM62Q0P6H9 643 aa6.4□□□□□ -1.38
SYCP1-208ENST00000493377 VWA3BQ502W6 1294 aa6.4□□□□□ -1.38
SYCP1-208ENST00000493377 MPRIPQ6WCQ1 1025 aa6.4□□□□□ -1.38
SYCP1-208ENST00000493377 CHST13Q8NET6 341 aa6.4□□□□□ -1.38
SYCP1-208ENST00000493377 GTF3C2Q8WUA4 911 aaPredicted RBP6.4□□□□□ -1.38
SYCP1-208ENST00000493377 LNPKQ9C0E8 428 aa6.4□□□□□ -1.38
SYCP1-208ENST00000493377 NRDCO43847 1150 aa6.39□□□□□ -1.39
SYCP1-208ENST00000493377 PNLIPP16233 465 aa6.39□□□□□ -1.39
SYCP1-208ENST00000493377 ETV3P41162 512 aa6.39□□□□□ -1.39
SYCP1-208ENST00000493377 CDH24Q86UP0 819 aa6.39□□□□□ -1.39
SYCP1-208ENST00000493377 DDX1Q92499 740 aaKnown RBP6.39□□□□□ -1.39
SYCP1-208ENST00000493377 KISS1RQ969F8 398 aaPredicted RBP6.39□□□□□ -1.39
SYCP1-208ENST00000493377 PCDHA4Q9UN74 947 aa6.39□□□□□ -1.39
SYCP1-208ENST00000493377 CPNE3O75131 537 aaKnown RBP6.38□□□□□ -1.39
SYCP1-208ENST00000493377 GADD45BO75293 160 aaPredicted RBP6.38□□□□□ -1.39
SYCP1-208ENST00000493377 TEKQ02763 1124 aa6.38□□□□□ -1.39
SYCP1-208ENST00000493377 PRAMEF13Q5VWM6 474 aa6.38□□□□□ -1.39
SYCP1-208ENST00000493377 SCARA3Q6AZY7 606 aa6.38□□□□□ -1.39
SYCP1-208ENST00000493377 TMC6Q7Z403 805 aa6.38□□□□□ -1.39
SYCP1-208ENST00000493377 HID1Q8IV36 788 aa6.38□□□□□ -1.39
SYCP1-208ENST00000493377 G6PC3Q9BUM1 346 aa6.38□□□□□ -1.39
SYCP1-208ENST00000493377 CCDC87Q9NVE4 849 aa6.38□□□□□ -1.39
SYCP1-208ENST00000493377 SLAIN2Q9P270 581 aa6.38□□□□□ -1.39
SYCP1-208ENST00000493377 PRAMEF27A3QJZ7 478 aa6.37□□□□□ -1.39
SYCP1-208ENST00000493377 NOBOXO60393 691 aa6.37□□□□□ -1.39
SYCP1-208ENST00000493377 XRCC5P13010 732 aaKnown RBP6.37□□□□□ -1.39
SYCP1-208ENST00000493377 TGFB2P61812 414 aa6.37□□□□□ -1.39
SYCP1-208ENST00000493377 WNT10AQ9GZT5 417 aa6.37□□□□□ -1.39
SYCP1-208ENST00000493377 KLHL14Q9P2G3 628 aa6.37□□□□□ -1.39
SYCP1-208ENST00000493377 RBAK-RBAKDNI3L0D1 243 aa6.36□□□□□ -1.39
SYCP1-208ENST00000493377 MPOP05164 745 aa6.36□□□□□ -1.39
SYCP1-208ENST00000493377 SDHBP21912 280 aa6.36□□□□□ -1.39
SYCP1-208ENST00000493377 FBLN1P23142 703 aa6.36□□□□□ -1.39
SYCP1-208ENST00000493377 IGFBP6P24592 240 aaPredicted RBP6.36□□□□□ -1.39
SYCP1-208ENST00000493377 GJA9P57773 515 aa6.36□□□□□ -1.39
SYCP1-208ENST00000493377 MTMR3Q13615 1198 aa6.36□□□□□ -1.39
SYCP1-208ENST00000493377 GRM2Q14416 872 aa6.36□□□□□ -1.39
SYCP1-208ENST00000493377 XAGE3Q8WTP9 111 aa6.36□□□□□ -1.39
SYCP1-208ENST00000493377 ING1Q9UK53 422 aaPredicted RBP6.36□□□□□ -1.39
SYCP1-208ENST00000493377 ZNF281Q9Y2X9 895 aa6.36□□□□□ -1.39
SYCP1-208ENST00000493377 HS3ST3A1Q9Y663 406 aa6.36□□□□□ -1.39
SYCP1-208ENST00000493377 SUSD2Q9UGT4 822 aa6.35□□□□□ -1.39
SYCP1-208ENST00000493377 A0A1B0GTL3 188 aa6.34□□□□□ -1.39
SYCP1-208ENST00000493377 SH3D21A4FU49 640 aa6.34□□□□□ -1.39
SYCP1-208ENST00000493377 PLATP00750 562 aa6.34□□□□□ -1.39
SYCP1-208ENST00000493377 KIR2DL1P43626 348 aaPredicted RBP6.34□□□□□ -1.39
SYCP1-208ENST00000493377 KIR2DL2P43627 348 aaPredicted RBP6.34□□□□□ -1.39
SYCP1-208ENST00000493377 FCGRTP55899 365 aa6.34□□□□□ -1.39
SYCP1-208ENST00000493377 SLC14A2Q15849 920 aa6.34□□□□□ -1.39
SYCP1-208ENST00000493377 ADGRG2Q8IZP9 1017 aa6.34□□□□□ -1.39
SYCP1-208ENST00000493377 GRIN3AQ8TCU5 1115 aa6.34□□□□□ -1.39
SYCP1-208ENST00000493377 SAMM50Q9Y512 469 aa6.34□□□□□ -1.39
SYCP1-208ENST00000493377 USP2O75604 605 aaPredicted RBP6.33□□□□□ -1.4
SYCP1-208ENST00000493377 ATG7O95352 703 aa6.33□□□□□ -1.4
SYCP1-208ENST00000493377 PFKLP17858 780 aa6.33□□□□□ -1.4
SYCP1-208ENST00000493377 LIMS1P48059 325 aa6.33□□□□□ -1.4
SYCP1-208ENST00000493377 NCKAP1LP55160 1127 aa6.33□□□□□ -1.4
SYCP1-208ENST00000493377 ETF1P62495 437 aaKnown RBP6.33□□□□□ -1.4
SYCP1-208ENST00000493377 CDSNQ15517 529 aa6.33□□□□□ -1.4
SYCP1-208ENST00000493377 LRCH2Q5VUJ6 765 aa6.33□□□□□ -1.4
SYCP1-208ENST00000493377 SAPCD2Q86UD0 394 aa6.33□□□□□ -1.4
SYCP1-208ENST00000493377 CCDC74AQ96AQ1 378 aa6.33□□□□□ -1.4
SYCP1-208ENST00000493377 KCNH3Q9ULD8 1083 aa6.33□□□□□ -1.4
SYCP1-208ENST00000493377 IRS2Q9Y4H2 1338 aa6.32□□□□□ -1.4
SYCP1-208ENST00000493377 MSL3P1P0C860 447 aa6.32□□□□□ -1.4
SYCP1-208ENST00000493377 DTWD2Q8NBA8 298 aa6.32□□□□□ -1.4
SYCP1-208ENST00000493377 CLUAP1Q96AJ1 413 aa6.32□□□□□ -1.4
SYCP1-208ENST00000493377 CDK5RAP1Q96SZ6 601 aaKnown RBP6.32□□□□□ -1.4
SYCP1-208ENST00000493377 PPP4R2Q9NY27 417 aa6.32□□□□□ -1.4
SYCP1-208ENST00000493377 LTBP3Q9NS15 1303 aa6.31□□□□□ -1.4
SYCP1-208ENST00000493377 LLGL2Q6P1M3 1020 aa6.31□□□□□ -1.4
SYCP1-208ENST00000493377 LRFN4Q6PJG9 635 aa6.31□□□□□ -1.4
SYCP1-208ENST00000493377 HDXQ7Z353 690 aa6.31□□□□□ -1.4
SYCP1-208ENST00000493377 FNIP1Q8TF40 1166 aa6.31□□□□□ -1.4
SYCP1-208ENST00000493377 WDR33Q9C0J8 1336 aaKnown RBP6.3□□□□□ -1.4
SYCP1-208ENST00000493377 AMHP03971 560 aa6.3□□□□□ -1.4
SYCP1-208ENST00000493377 BMP6P22004 513 aa6.3□□□□□ -1.4
SYCP1-208ENST00000493377 INPP5AQ14642 412 aa6.3□□□□□ -1.4
SYCP1-208ENST00000493377 LRRC14Q15048 493 aa6.3□□□□□ -1.4
SYCP1-208ENST00000493377 TBC1D10BQ4KMP7 808 aaPredicted RBP6.3□□□□□ -1.4
SYCP1-208ENST00000493377 CDCP2Q5VXM1 449 aa6.3□□□□□ -1.4
SYCP1-208ENST00000493377 ARL4AP40617 200 aa6.29□□□□□ -1.4
SYCP1-208ENST00000493377 KRTAP10-9P60411 292 aa6.29□□□□□ -1.4
SYCP1-208ENST00000493377 ORC1Q13415 861 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms