RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 TRPV1Q8NER1 839 aa10.25□□□□□ -0.77
APOBEC3F-204ENST00000491387 NPLOC4Q8TAT6 608 aa10.25□□□□□ -0.77
APOBEC3F-204ENST00000491387 MOV10L1Q9BXT6 1211 aaKnown RBP10.25□□□□□ -0.77
APOBEC3F-204ENST00000491387 CRNKL1Q9BZJ0 848 aaKnown RBP10.25□□□□□ -0.77
APOBEC3F-204ENST00000491387 RPAP3Q9H6T3 665 aaPredicted RBP10.25□□□□□ -0.77
APOBEC3F-204ENST00000491387 CWC22Q9HCG8 908 aaKnown RBP10.25□□□□□ -0.77
APOBEC3F-204ENST00000491387 EXOC6BQ9Y2D4 811 aa10.25□□□□□ -0.77
APOBEC3F-204ENST00000491387 MYH4Q9Y623 1939 aa10.25□□□□□ -0.77
APOBEC3F-204ENST00000491387 A0A0G2JMZ2 1700 aa10.24□□□□□ -0.77
APOBEC3F-204ENST00000491387 TCRBV5S4A2TA0A5A2 114 aa10.24□□□□□ -0.77
APOBEC3F-204ENST00000491387 POLR3DP05423 398 aaPredicted RBP10.24□□□□□ -0.77
APOBEC3F-204ENST00000491387 SNX17Q15036 470 aa10.24□□□□□ -0.77
APOBEC3F-204ENST00000491387 SLC9C2Q5TAH2 1124 aa10.24□□□□□ -0.77
APOBEC3F-204ENST00000491387 C1orf53Q5VUE5 145 aa10.24□□□□□ -0.77
APOBEC3F-204ENST00000491387 TMEM179Q6ZVK1 233 aa10.24□□□□□ -0.77
APOBEC3F-204ENST00000491387 Q7L0L9 218 aa10.24□□□□□ -0.77
APOBEC3F-204ENST00000491387 ARRDC4Q8NCT1 418 aa10.24□□□□□ -0.77
APOBEC3F-204ENST00000491387 RHPN1Q8TCX5 695 aa10.24□□□□□ -0.77
APOBEC3F-204ENST00000491387 SENP6Q9GZR1 1112 aaPredicted RBP10.24□□□□□ -0.77
APOBEC3F-204ENST00000491387 SPATC1LQ9H0A9 340 aa10.24□□□□□ -0.77
APOBEC3F-204ENST00000491387 DCP1AQ9NPI6 582 aaPredicted RBP10.24□□□□□ -0.77
APOBEC3F-204ENST00000491387 MCM9Q9NXL9 1143 aa10.24□□□□□ -0.77
APOBEC3F-204ENST00000491387 SWAP70Q9UH65 585 aa10.24□□□□□ -0.77
APOBEC3F-204ENST00000491387 COG6Q9Y2V7 657 aa10.24□□□□□ -0.77
APOBEC3F-204ENST00000491387 ZNFX1Q9P2E3 1918 aaKnown RBP10.23□□□□□ -0.77
APOBEC3F-204ENST00000491387 SEPT4O43236 478 aa10.23□□□□□ -0.77
APOBEC3F-204ENST00000491387 ADORA2AP29274 412 aa10.23□□□□□ -0.77
APOBEC3F-204ENST00000491387 DSG3P32926 999 aa10.23□□□□□ -0.77
APOBEC3F-204ENST00000491387 CYP2C19P33261 490 aa10.23□□□□□ -0.77
APOBEC3F-204ENST00000491387 WDR78Q5VTH9 848 aa10.23□□□□□ -0.77
APOBEC3F-204ENST00000491387 SIAH1Q8IUQ4 282 aa10.23□□□□□ -0.77
APOBEC3F-204ENST00000491387 SIRT2Q8IXJ6 389 aa10.23□□□□□ -0.77
APOBEC3F-204ENST00000491387 BCL11AQ9H165 835 aa10.23□□□□□ -0.77
APOBEC3F-204ENST00000491387 MROH8Q9H579 483 aa10.23□□□□□ -0.77
APOBEC3F-204ENST00000491387 SLC5A4Q9NY91 659 aa10.23□□□□□ -0.77
APOBEC3F-204ENST00000491387 NRBP1Q9UHY1 535 aa10.23□□□□□ -0.77
APOBEC3F-204ENST00000491387 ADAMTS5Q9UNA0 930 aa10.23□□□□□ -0.77
APOBEC3F-204ENST00000491387 TMX2Q9Y320 296 aa10.23□□□□□ -0.77
APOBEC3F-204ENST00000491387 LTBP2Q14767 1821 aa10.22□□□□□ -0.77
APOBEC3F-204ENST00000491387 TTC28Q96AY4 2481 aa10.22□□□□□ -0.77
APOBEC3F-204ENST00000491387 LAMA2P24043 3122 aaKnown RBP10.22□□□□□ -0.77
APOBEC3F-204ENST00000491387 APBB1O00213 710 aa10.22□□□□□ -0.77
APOBEC3F-204ENST00000491387 COBLO75128 1261 aa10.22□□□□□ -0.77
APOBEC3F-204ENST00000491387 ERCC3P19447 782 aa10.22□□□□□ -0.77
APOBEC3F-204ENST00000491387 MDM2Q00987 491 aaPredicted RBP10.22□□□□□ -0.77
APOBEC3F-204ENST00000491387 KIAA1755Q5JYT7 1200 aa10.22□□□□□ -0.77
APOBEC3F-204ENST00000491387 SLC39A5Q6ZMH5 540 aa10.22□□□□□ -0.77
APOBEC3F-204ENST00000491387 DPP9Q86TI2 863 aa10.22□□□□□ -0.77
APOBEC3F-204ENST00000491387 RPAP2Q8IXW5 612 aaPredicted RBP10.22□□□□□ -0.77
APOBEC3F-204ENST00000491387 CLASRPQ8N2M8 674 aaKnown RBP10.22□□□□□ -0.77
APOBEC3F-204ENST00000491387 KIF1BPQ96EK5 621 aa10.22□□□□□ -0.77
APOBEC3F-204ENST00000491387 CCDC17Q96LX7 622 aa10.22□□□□□ -0.77
APOBEC3F-204ENST00000491387 LBHD1Q9BQE6 289 aaPredicted RBP10.22□□□□□ -0.77
APOBEC3F-204ENST00000491387 IL1RAPL2Q9NP60 686 aa10.22□□□□□ -0.77
APOBEC3F-204ENST00000491387 ATP8A2Q9NTI2 1148 aa10.22□□□□□ -0.77
APOBEC3F-204ENST00000491387 ZNF532Q9HCE3 1301 aa10.22□□□□□ -0.77
APOBEC3F-204ENST00000491387 CNGA1P29973 690 aa10.21□□□□□ -0.77
APOBEC3F-204ENST00000491387 RTP1P59025 263 aa10.21□□□□□ -0.77
APOBEC3F-204ENST00000491387 EVX2Q03828 476 aa10.21□□□□□ -0.77
APOBEC3F-204ENST00000491387 LCORLQ8N3X6 602 aa10.21□□□□□ -0.77
APOBEC3F-204ENST00000491387 GUCD1Q96NT3 240 aa10.21□□□□□ -0.77
APOBEC3F-204ENST00000491387 SH2D4AQ9H788 454 aa10.21□□□□□ -0.77
APOBEC3F-204ENST00000491387 VCPKMTQ9H867 229 aa10.21□□□□□ -0.77
APOBEC3F-204ENST00000491387 ARHGEF10LQ9HCE6 1279 aa10.21□□□□□ -0.77
APOBEC3F-204ENST00000491387 ROBO3Q96MS0 1386 aa10.21□□□□□ -0.78
APOBEC3F-204ENST00000491387 SMCHD1A6NHR9 2005 aa10.21□□□□□ -0.78
APOBEC3F-204ENST00000491387 KBTBD13C9JR72 458 aa10.2□□□□□ -0.78
APOBEC3F-204ENST00000491387 GOLIM4O00461 696 aa10.2□□□□□ -0.78
APOBEC3F-204ENST00000491387 MPHOSPH10O00566 681 aaKnown RBP10.2□□□□□ -0.78
APOBEC3F-204ENST00000491387 WDR46O15213 610 aaKnown RBP10.2□□□□□ -0.78
APOBEC3F-204ENST00000491387 RAB11FIP3O75154 756 aa10.2□□□□□ -0.78
APOBEC3F-204ENST00000491387 SLC25A27O95847 323 aa10.2□□□□□ -0.78
APOBEC3F-204ENST00000491387 MS4A1P11836 297 aa10.2□□□□□ -0.78
APOBEC3F-204ENST00000491387 ADD2P35612 726 aa10.2□□□□□ -0.78
APOBEC3F-204ENST00000491387 ATN1P54259 1190 aaPredicted RBP10.2□□□□□ -0.78
APOBEC3F-204ENST00000491387 UBE3CQ15386 1083 aa10.2□□□□□ -0.78
APOBEC3F-204ENST00000491387 SLFNL1Q499Z3 407 aa10.2□□□□□ -0.78
APOBEC3F-204ENST00000491387 C12orf60Q5U649 245 aa10.2□□□□□ -0.78
APOBEC3F-204ENST00000491387 SLC44A5Q8NCS7 719 aa10.2□□□□□ -0.78
APOBEC3F-204ENST00000491387 SDR42E1Q8WUS8 393 aa10.2□□□□□ -0.78
APOBEC3F-204ENST00000491387 MAML3Q96JK9 1138 aa10.2□□□□□ -0.78
APOBEC3F-204ENST00000491387 GREB1LQ9C091 1923 aaPredicted RBP10.2□□□□□ -0.78
APOBEC3F-204ENST00000491387 TANGO6Q9C0B7 1094 aa10.2□□□□□ -0.78
APOBEC3F-204ENST00000491387 PRKAG2Q9UGJ0 569 aa10.2□□□□□ -0.78
APOBEC3F-204ENST00000491387 DIS3Q9Y2L1 958 aaKnown RBP10.2□□□□□ -0.78
APOBEC3F-204ENST00000491387 PLXNA1Q9UIW2 1896 aa10.19□□□□□ -0.78
APOBEC3F-204ENST00000491387 HMMRO75330 724 aa10.19□□□□□ -0.78
APOBEC3F-204ENST00000491387 FLOT1O75955 427 aa10.19□□□□□ -0.78
APOBEC3F-204ENST00000491387 CHGBP05060 677 aa10.19□□□□□ -0.78
APOBEC3F-204ENST00000491387 CYP2D6P10635 497 aa10.19□□□□□ -0.78
APOBEC3F-204ENST00000491387 FCER1AP12319 257 aa10.19□□□□□ -0.78
APOBEC3F-204ENST00000491387 AKR1B1P15121 316 aa10.19□□□□□ -0.78
APOBEC3F-204ENST00000491387 ATP5JP18859 108 aa10.19□□□□□ -0.78
APOBEC3F-204ENST00000491387 COPB2P35606 906 aa10.19□□□□□ -0.78
APOBEC3F-204ENST00000491387 ICA1Q05084 483 aa10.19□□□□□ -0.78
APOBEC3F-204ENST00000491387 LRRC41Q15345 812 aa10.19□□□□□ -0.78
APOBEC3F-204ENST00000491387 GJC2Q5T442 439 aaPredicted RBP10.19□□□□□ -0.78
APOBEC3F-204ENST00000491387 C16orf86Q6ZW13 317 aa10.19□□□□□ -0.78
APOBEC3F-204ENST00000491387 RIOX2Q8IUF8 465 aa10.19□□□□□ -0.78
APOBEC3F-204ENST00000491387 ATG4CQ96DT6 458 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms