RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 ZNF287Q9HBT7 754 aa26.35■■□□□ 1.81
USF3-203ENST00000491165 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.35■■□□□ 1.81
USF3-203ENST00000491165 ATAD5Q96QE3 1844 aa26.35■■□□□ 1.81
USF3-203ENST00000491165 PHF20L1A8MW92 1017 aa26.34■■□□□ 1.81
USF3-203ENST00000491165 RBM10P98175 930 aaKnown RBP26.34■■□□□ 1.81
USF3-203ENST00000491165 NOLC1Q14978 699 aaKnown RBP eCLIP26.34■■□□□ 1.81
USF3-203ENST00000491165 CERKLQ49MI3 558 aaPredicted RBP26.34■■□□□ 1.81
USF3-203ENST00000491165 DNTTIP2Q5QJE6 756 aaKnown RBP26.34■■□□□ 1.81
USF3-203ENST00000491165 BRF1Q92994 677 aa26.34■■□□□ 1.81
USF3-203ENST00000491165 TRIM34Q9BYJ4 488 aa26.34■■□□□ 1.81
USF3-203ENST00000491165 TNKSO95271 1327 aa26.34■■□□□ 1.81
USF3-203ENST00000491165 LIG1P18858 919 aa26.33■■□□□ 1.81
USF3-203ENST00000491165 ENAHQ8N8S7 591 aaPredicted RBP26.33■■□□□ 1.81
USF3-203ENST00000491165 GTF3C6Q969F1 213 aa26.33■■□□□ 1.81
USF3-203ENST00000491165 SPATA32Q96LK8 384 aa26.33■■□□□ 1.81
USF3-203ENST00000491165 GOLGA6L4A6NEF3 574 aa26.33■■□□□ 1.81
USF3-203ENST00000491165 SH2B2O14492 632 aaPredicted RBP26.33■■□□□ 1.81
USF3-203ENST00000491165 SEC23AQ15436 765 aa26.33■■□□□ 1.81
USF3-203ENST00000491165 LY9Q9HBG7 655 aa26.33■■□□□ 1.81
USF3-203ENST00000491165 TRAF5O00463 557 aa26.32■■□□□ 1.8
USF3-203ENST00000491165 RCSD1Q6JBY9 416 aa26.32■■□□□ 1.8
USF3-203ENST00000491165 FAM200AQ8TCP9 573 aa26.32■■□□□ 1.8
USF3-203ENST00000491165 ZSCAN10Q96SZ4 725 aaPredicted RBP26.32■■□□□ 1.8
USF3-203ENST00000491165 MAP7D2Q96T17 732 aa26.32■■□□□ 1.8
USF3-203ENST00000491165 FAM13BQ9NYF5 915 aa26.32■■□□□ 1.8
USF3-203ENST00000491165 WDR19Q8NEZ3 1342 aa26.32■■□□□ 1.8
USF3-203ENST00000491165 IFIT3O14879 490 aaKnown RBP26.32■■□□□ 1.8
USF3-203ENST00000491165 PRKG1Q13976 671 aa26.32■■□□□ 1.8
USF3-203ENST00000491165 NEDD1Q8NHV4 660 aa26.32■■□□□ 1.8
USF3-203ENST00000491165 CDCA5Q96FF9 252 aa26.32■■□□□ 1.8
USF3-203ENST00000491165 PLIN4Q96Q06 1357 aa26.31■■□□□ 1.8
USF3-203ENST00000491165 AP5Z1O43299 807 aa26.31■■□□□ 1.8
USF3-203ENST00000491165 TPM3P06753 285 aa26.31■■□□□ 1.8
USF3-203ENST00000491165 GUCY1A2P33402 732 aa26.31■■□□□ 1.8
USF3-203ENST00000491165 APOBRQ0VD83 1088 aa26.31■■□□□ 1.8
USF3-203ENST00000491165 LDHDQ86WU2 507 aa26.31■■□□□ 1.8
USF3-203ENST00000491165 CEP95Q96GE4 821 aa26.31■■□□□ 1.8
USF3-203ENST00000491165 PAPPA2Q9BXP8 1791 aa26.31■■□□□ 1.8
USF3-203ENST00000491165 OTOFQ9HC10 1997 aa26.3■■□□□ 1.8
USF3-203ENST00000491165 MPHOSPH10O00566 681 aaKnown RBP26.3■■□□□ 1.8
USF3-203ENST00000491165 TMEM67Q5HYA8 995 aa26.3■■□□□ 1.8
USF3-203ENST00000491165 IQCA1Q86XH1 822 aa26.3■■□□□ 1.8
USF3-203ENST00000491165 FBXL16Q8N461 479 aa26.3■■□□□ 1.8
USF3-203ENST00000491165 LEO1Q8WVC0 666 aaPredicted RBP26.3■■□□□ 1.8
USF3-203ENST00000491165 UBAC1Q9BSL1 405 aa26.3■■□□□ 1.8
USF3-203ENST00000491165 ANGEL1Q9UNK9 670 aaKnown RBP26.3■■□□□ 1.8
USF3-203ENST00000491165 TYRO3Q06418 890 aa26.3■■□□□ 1.8
USF3-203ENST00000491165 TMEM87BQ96K49 555 aa26.3■■□□□ 1.8
USF3-203ENST00000491165 TNMDQ9H2S6 317 aa26.3■■□□□ 1.8
USF3-203ENST00000491165 DDX19AQ9NUU7 478 aaKnown RBP26.3■■□□□ 1.8
USF3-203ENST00000491165 MYH4Q9Y623 1939 aa26.29■■□□□ 1.8
USF3-203ENST00000491165 IGKV6D-41A0A0C4DH26 115 aa26.29■■□□□ 1.8
USF3-203ENST00000491165 GH2P01242 217 aa26.29■■□□□ 1.8
USF3-203ENST00000491165 INPP5BP32019 993 aa26.29■■□□□ 1.8
USF3-203ENST00000491165 FGD1P98174 961 aa26.29■■□□□ 1.8
USF3-203ENST00000491165 CAMK4Q16566 473 aa26.29■■□□□ 1.8
USF3-203ENST00000491165 GPBP1L1Q9HC44 474 aaPredicted RBP26.29■■□□□ 1.8
USF3-203ENST00000491165 SPTLC3Q9NUV7 552 aa26.29■■□□□ 1.8
USF3-203ENST00000491165 TFIP11Q9UBB9 837 aaKnown RBP26.29■■□□□ 1.8
USF3-203ENST00000491165 DACT1Q9NYF0 836 aa26.29■■□□□ 1.8
USF3-203ENST00000491165 MRVI1Q9Y6F6 885 aa26.29■■□□□ 1.8
USF3-203ENST00000491165 ABCB5Q2M3G0 1257 aa26.28■■□□□ 1.8
USF3-203ENST00000491165 RAB11FIP4Q86YS3 637 aa26.28■■□□□ 1.8
USF3-203ENST00000491165 TCP11L1Q9NUJ3 509 aa26.28■■□□□ 1.8
USF3-203ENST00000491165 GOLGA6L6A8MZA4 724 aa26.27■■□□□ 1.8
USF3-203ENST00000491165 JAK2O60674 1132 aa26.27■■□□□ 1.8
USF3-203ENST00000491165 CAP2P40123 477 aa26.27■■□□□ 1.8
USF3-203ENST00000491165 SEPT2Q15019 361 aa26.27■■□□□ 1.8
USF3-203ENST00000491165 SUPT20HL1Q3ZLR7 823 aa26.27■■□□□ 1.8
USF3-203ENST00000491165 CCDC84Q86UT8 332 aaPredicted RBP26.27■■□□□ 1.8
USF3-203ENST00000491165 PRIMPOLQ96LW4 560 aa26.27■■□□□ 1.8
USF3-203ENST00000491165 CCDC17Q96LX7 622 aa26.27■■□□□ 1.8
USF3-203ENST00000491165 USP2O75604 605 aaPredicted RBP26.27■■□□□ 1.8
USF3-203ENST00000491165 WTAPQ15007 396 aa26.27■■□□□ 1.8
USF3-203ENST00000491165 MOB2Q70IA6 237 aa26.27■■□□□ 1.8
USF3-203ENST00000491165 KLRG1Q96E93 195 aa26.27■■□□□ 1.8
USF3-203ENST00000491165 MYL10Q9BUA6 226 aa26.27■■□□□ 1.8
USF3-203ENST00000491165 MTMR4Q9NYA4 1195 aa26.27■■□□□ 1.8
USF3-203ENST00000491165 TAOK2Q9UL54 1235 aa26.27■■□□□ 1.8
USF3-203ENST00000491165 STX8Q9UNK0 236 aa26.27■■□□□ 1.8
USF3-203ENST00000491165 DOCK1Q14185 1865 aa26.26■■□□□ 1.79
USF3-203ENST00000491165 KIF3CO14782 793 aa26.26■■□□□ 1.79
USF3-203ENST00000491165 LIFRP42702 1097 aa26.26■■□□□ 1.79
USF3-203ENST00000491165 SIAH1Q8IUQ4 282 aa26.26■■□□□ 1.79
USF3-203ENST00000491165 MYRIPQ8NFW9 859 aa26.26■■□□□ 1.79
USF3-203ENST00000491165 ZKSCAN4Q969J2 545 aaPredicted RBP26.26■■□□□ 1.79
USF3-203ENST00000491165 WRNIP1Q96S55 665 aa26.26■■□□□ 1.79
USF3-203ENST00000491165 NOVP48745 357 aa26.26■■□□□ 1.79
USF3-203ENST00000491165 SGMS1Q86VZ5 419 aa26.26■■□□□ 1.79
USF3-203ENST00000491165 CLSTN2Q9H4D0 955 aa26.26■■□□□ 1.79
USF3-203ENST00000491165 ZNF112Q9UJU3 913 aa26.26■■□□□ 1.79
USF3-203ENST00000491165 ZBTB21Q9ULJ3 1066 aa26.26■■□□□ 1.79
USF3-203ENST00000491165 H3BQV1 296 aa26.25■■□□□ 1.79
USF3-203ENST00000491165 RXRAP19793 462 aa26.25■■□□□ 1.79
USF3-203ENST00000491165 HMGN5P82970 282 aaKnown RBP26.25■■□□□ 1.79
USF3-203ENST00000491165 RESTQ13127 1097 aa26.25■■□□□ 1.79
USF3-203ENST00000491165 SART3Q15020 963 aaKnown RBP26.25■■□□□ 1.79
USF3-203ENST00000491165 IFFO2Q5TF58 517 aa26.25■■□□□ 1.79
USF3-203ENST00000491165 DCAF15Q66K64 600 aa26.25■■□□□ 1.79
USF3-203ENST00000491165 RBM43Q6ZSC3 357 aaKnown RBP26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 675.6 ms