RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 SHISA4Q96DD7 197 aa16.27■□□□□ 0.2
TRAIP-211ENST00000491060 DEFB118Q96PH6 123 aa16.27■□□□□ 0.2
TRAIP-211ENST00000491060 MORF4L1Q9UBU8 362 aa16.27■□□□□ 0.2
TRAIP-211ENST00000491060 PARP14Q460N5 1801 aa16.26■□□□□ 0.19
TRAIP-211ENST00000491060 SALL3Q9BXA9 1300 aa16.26■□□□□ 0.19
TRAIP-211ENST00000491060 SPDYE16A6NNV3 312 aaPredicted RBP16.26■□□□□ 0.19
TRAIP-211ENST00000491060 FLOT1O75955 427 aa16.26■□□□□ 0.19
TRAIP-211ENST00000491060 CTDSPL2Q05D32 466 aa16.26■□□□□ 0.19
TRAIP-211ENST00000491060 CCL14Q16627 93 aa16.26■□□□□ 0.19
TRAIP-211ENST00000491060 FAM47AQ5JRC9 791 aa16.26■□□□□ 0.19
TRAIP-211ENST00000491060 ZMYM1Q5SVZ6 1142 aa16.26■□□□□ 0.19
TRAIP-211ENST00000491060 GPR142Q7Z601 462 aa16.26■□□□□ 0.19
TRAIP-211ENST00000491060 SIAH1Q8IUQ4 282 aa16.26■□□□□ 0.19
TRAIP-211ENST00000491060 C12orf42Q96LP6 360 aa16.26■□□□□ 0.19
TRAIP-211ENST00000491060 NUP88Q99567 741 aaPredicted RBP16.26■□□□□ 0.19
TRAIP-211ENST00000491060 NAPBQ9H115 298 aa16.26■□□□□ 0.19
TRAIP-211ENST00000491060 INCENPQ9NQS7 918 aa16.26■□□□□ 0.19
TRAIP-211ENST00000491060 MTMR7Q9Y216 660 aa16.26■□□□□ 0.19
TRAIP-211ENST00000491060 RLFQ13129 1914 aa16.25■□□□□ 0.19
TRAIP-211ENST00000491060 PATL2C9JE40 543 aaKnown RBP16.25■□□□□ 0.19
TRAIP-211ENST00000491060 TFRCP02786 760 aaKnown RBP16.25■□□□□ 0.19
TRAIP-211ENST00000491060 RASA1P20936 1047 aa16.25■□□□□ 0.19
TRAIP-211ENST00000491060 LRRFIP1Q32MZ4 808 aaKnown RBP16.25■□□□□ 0.19
TRAIP-211ENST00000491060 VPS53Q5VIR6 699 aa16.25■□□□□ 0.19
TRAIP-211ENST00000491060 PLEKHH3Q7Z736 793 aa16.25■□□□□ 0.19
TRAIP-211ENST00000491060 ATG4CQ96DT6 458 aa16.25■□□□□ 0.19
TRAIP-211ENST00000491060 FAM227BQ96M60 508 aa16.25■□□□□ 0.19
TRAIP-211ENST00000491060 NUDT12Q9BQG2 462 aa16.25■□□□□ 0.19
TRAIP-211ENST00000491060 FBXO28Q9NVF7 368 aa16.25■□□□□ 0.19
TRAIP-211ENST00000491060 GJD2Q9UKL4 321 aa16.25■□□□□ 0.19
TRAIP-211ENST00000491060 GNAT2P19087 354 aa16.24■□□□□ 0.19
TRAIP-211ENST00000491060 NMIQ13287 307 aaPredicted RBP16.24■□□□□ 0.19
TRAIP-211ENST00000491060 FAM83BQ5T0W9 1011 aa16.24■□□□□ 0.19
TRAIP-211ENST00000491060 U2AF1L4Q8WU68 220 aaKnown RBP16.24■□□□□ 0.19
TRAIP-211ENST00000491060 TRIB2Q92519 343 aa16.24■□□□□ 0.19
TRAIP-211ENST00000491060 CCDC17Q96LX7 622 aa16.24■□□□□ 0.19
TRAIP-211ENST00000491060 NACAP1Q9BZK3 213 aa16.24■□□□□ 0.19
TRAIP-211ENST00000491060 GREB1LQ9C091 1923 aaPredicted RBP16.23■□□□□ 0.19
TRAIP-211ENST00000491060 A0A0D9SFI3 127 aa16.23■□□□□ 0.19
TRAIP-211ENST00000491060 MAPK4P31152 587 aa16.23■□□□□ 0.19
TRAIP-211ENST00000491060 IRF5Q13568 498 aa16.23■□□□□ 0.19
TRAIP-211ENST00000491060 SBK1Q52WX2 424 aa16.23■□□□□ 0.19
TRAIP-211ENST00000491060 CHD1LQ86WJ1 897 aa16.23■□□□□ 0.19
TRAIP-211ENST00000491060 ZNF444Q8N0Y2 327 aaPredicted RBP16.23■□□□□ 0.19
TRAIP-211ENST00000491060 LRRC47Q8N1G4 583 aaKnown RBP16.23■□□□□ 0.19
TRAIP-211ENST00000491060 DPF3Q92784 378 aa16.23■□□□□ 0.19
TRAIP-211ENST00000491060 EVI5LQ96CN4 794 aa16.23■□□□□ 0.19
TRAIP-211ENST00000491060 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.23■□□□□ 0.19
TRAIP-211ENST00000491060 SH2D4AQ9H788 454 aa16.23■□□□□ 0.19
TRAIP-211ENST00000491060 VCPKMTQ9H867 229 aa16.23■□□□□ 0.19
TRAIP-211ENST00000491060 TOMM22Q9NS69 142 aa16.23■□□□□ 0.19
TRAIP-211ENST00000491060 CLIP2Q9UDT6 1046 aa16.23■□□□□ 0.19
TRAIP-211ENST00000491060 RABGAP1Q9Y3P9 1069 aa16.23■□□□□ 0.19
TRAIP-211ENST00000491060 ZNFX1Q9P2E3 1918 aaKnown RBP16.23■□□□□ 0.19
TRAIP-211ENST00000491060 HMGCRP04035 888 aa16.22■□□□□ 0.19
TRAIP-211ENST00000491060 ZKSCAN1P17029 563 aaPredicted RBP16.22■□□□□ 0.19
TRAIP-211ENST00000491060 PPARAQ07869 468 aa16.22■□□□□ 0.19
TRAIP-211ENST00000491060 COG2Q14746 738 aa16.22■□□□□ 0.19
TRAIP-211ENST00000491060 RRP12Q5JTH9 1297 aaKnown RBP16.22■□□□□ 0.19
TRAIP-211ENST00000491060 NCAPG2Q86XI2 1143 aa16.22■□□□□ 0.19
TRAIP-211ENST00000491060 PXYLP1Q8TE99 480 aa16.22■□□□□ 0.19
TRAIP-211ENST00000491060 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.22■□□□□ 0.19
TRAIP-211ENST00000491060 KANSL2Q9H9L4 492 aa16.22■□□□□ 0.19
TRAIP-211ENST00000491060 STAP2Q9UGK3 403 aa16.22■□□□□ 0.19
TRAIP-211ENST00000491060 TMX2Q9Y320 296 aa16.22■□□□□ 0.19
TRAIP-211ENST00000491060 GJB1P08034 283 aa16.21■□□□□ 0.19
TRAIP-211ENST00000491060 PRKAR2AP13861 404 aaKnown RBP16.21■□□□□ 0.19
TRAIP-211ENST00000491060 DSG3P32926 999 aa16.21■□□□□ 0.19
TRAIP-211ENST00000491060 RGS2P41220 211 aa16.21■□□□□ 0.19
TRAIP-211ENST00000491060 CCNA1P78396 465 aa16.21■□□□□ 0.19
TRAIP-211ENST00000491060 SMC5Q8IY18 1101 aa16.21■□□□□ 0.19
TRAIP-211ENST00000491060 DIS3LQ8TF46 1054 aaKnown RBP16.21■□□□□ 0.19
TRAIP-211ENST00000491060 GTF3C2Q8WUA4 911 aaPredicted RBP16.21■□□□□ 0.19
TRAIP-211ENST00000491060 MOV10L1Q9BXT6 1211 aaKnown RBP16.21■□□□□ 0.19
TRAIP-211ENST00000491060 GOPCQ9HD26 462 aa16.21■□□□□ 0.19
TRAIP-211ENST00000491060 IVNS1ABPQ9Y6Y0 642 aa16.21■□□□□ 0.19
TRAIP-211ENST00000491060 A0A0G2JMZ2 1700 aa16.21■□□□□ 0.19
TRAIP-211ENST00000491060 FARP2O94887 1054 aaPredicted RBP16.2■□□□□ 0.18
TRAIP-211ENST00000491060 SGPL1O95470 568 aa16.2■□□□□ 0.18
TRAIP-211ENST00000491060 TSPY3P0CV98 308 aa16.2■□□□□ 0.18
TRAIP-211ENST00000491060 TSPY8P0CW00 308 aa16.2■□□□□ 0.18
TRAIP-211ENST00000491060 CCND3P30281 292 aaPredicted RBP16.2■□□□□ 0.18
TRAIP-211ENST00000491060 GJA8P48165 433 aa16.2■□□□□ 0.18
TRAIP-211ENST00000491060 HAND2P61296 217 aa16.2■□□□□ 0.18
TRAIP-211ENST00000491060 TFAP4Q01664 338 aa16.2■□□□□ 0.18
TRAIP-211ENST00000491060 PRPF38BQ5VTL8 546 aaKnown RBP16.2■□□□□ 0.18
TRAIP-211ENST00000491060 GIMAP6Q6P9H5 292 aa16.2■□□□□ 0.18
TRAIP-211ENST00000491060 ZNF589Q86UQ0 364 aaPredicted RBP16.2■□□□□ 0.18
TRAIP-211ENST00000491060 PLEKHM2Q8IWE5 1019 aa16.2■□□□□ 0.18
TRAIP-211ENST00000491060 FLRT1Q9NZU1 646 aa16.2■□□□□ 0.18
TRAIP-211ENST00000491060 PCDH10Q9P2E7 1040 aa16.2■□□□□ 0.18
TRAIP-211ENST00000491060 ROBO3Q96MS0 1386 aa16.19■□□□□ 0.18
TRAIP-211ENST00000491060 WDR46O15213 610 aaKnown RBP16.19■□□□□ 0.18
TRAIP-211ENST00000491060 FOXP2O15409 715 aa16.19■□□□□ 0.18
TRAIP-211ENST00000491060 NMT2O60551 498 aa16.19■□□□□ 0.18
TRAIP-211ENST00000491060 SLC3A2P08195 630 aaKnown RBP16.19■□□□□ 0.18
TRAIP-211ENST00000491060 ERCC3P19447 782 aa16.19■□□□□ 0.18
TRAIP-211ENST00000491060 CNGA1P29973 690 aa16.19■□□□□ 0.18
TRAIP-211ENST00000491060 NUCB1Q02818 461 aa16.19■□□□□ 0.18
TRAIP-211ENST00000491060 MAP2K5Q13163 448 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms