RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 VCPKMTQ9H867 229 aa18.15■□□□□ 0.5
COL27A1-206ENST00000490831 MKNK2Q9HBH9 465 aa18.15■□□□□ 0.5
COL27A1-206ENST00000490831 GJD2Q9UKL4 321 aa18.15■□□□□ 0.5
COL27A1-206ENST00000490831 RLFQ13129 1914 aa18.14■□□□□ 0.49
COL27A1-206ENST00000490831 IGKV6D-41A0A0C4DH26 115 aa18.14■□□□□ 0.49
COL27A1-206ENST00000490831 A0A0D9SFI3 127 aa18.14■□□□□ 0.49
COL27A1-206ENST00000490831 SPDYE16A6NNV3 312 aaPredicted RBP18.14■□□□□ 0.49
COL27A1-206ENST00000490831 TRIM6-TRIM34B2RNG4 842 aa18.14■□□□□ 0.49
COL27A1-206ENST00000490831 EEF2P13639 858 aaKnown RBP18.14■□□□□ 0.49
COL27A1-206ENST00000490831 PPARAQ07869 468 aa18.14■□□□□ 0.49
COL27A1-206ENST00000490831 MCMDC2Q4G0Z9 681 aa18.14■□□□□ 0.49
COL27A1-206ENST00000490831 NYAP2Q9P242 653 aa18.14■□□□□ 0.49
COL27A1-206ENST00000490831 PLIN4Q96Q06 1357 aa18.14■□□□□ 0.49
COL27A1-206ENST00000490831 ADCY3O60266 1144 aa18.13■□□□□ 0.49
COL27A1-206ENST00000490831 PEX10O60683 326 aa18.13■□□□□ 0.49
COL27A1-206ENST00000490831 MAPK4P31152 587 aa18.13■□□□□ 0.49
COL27A1-206ENST00000490831 COG2Q14746 738 aa18.13■□□□□ 0.49
COL27A1-206ENST00000490831 VPS53Q5VIR6 699 aa18.13■□□□□ 0.49
COL27A1-206ENST00000490831 TMEM106CQ9BVX2 250 aa18.13■□□□□ 0.49
COL27A1-206ENST00000490831 HOXC10Q9NYD6 342 aa18.13■□□□□ 0.49
COL27A1-206ENST00000490831 ANAPC4Q9UJX5 808 aa18.13■□□□□ 0.49
COL27A1-206ENST00000490831 TNRC18O15417 2968 aaPredicted RBP18.12■□□□□ 0.49
COL27A1-206ENST00000490831 PLXNB2O15031 1838 aa18.12■□□□□ 0.49
COL27A1-206ENST00000490831 WDR46O15213 610 aaKnown RBP18.12■□□□□ 0.49
COL27A1-206ENST00000490831 SLC3A2P08195 630 aaKnown RBP18.12■□□□□ 0.49
COL27A1-206ENST00000490831 SDSP20132 328 aa18.12■□□□□ 0.49
COL27A1-206ENST00000490831 PDE4AP27815 886 aa18.12■□□□□ 0.49
COL27A1-206ENST00000490831 PDE4BQ07343 736 aa18.12■□□□□ 0.49
COL27A1-206ENST00000490831 NMIQ13287 307 aaPredicted RBP18.12■□□□□ 0.49
COL27A1-206ENST00000490831 ZNF444Q8N0Y2 327 aaPredicted RBP18.12■□□□□ 0.49
COL27A1-206ENST00000490831 RILPL2Q969X0 211 aa18.12■□□□□ 0.49
COL27A1-206ENST00000490831 PAGR1Q9BTK6 254 aa18.12■□□□□ 0.49
COL27A1-206ENST00000490831 PORCNQ9H237 461 aa18.12■□□□□ 0.49
COL27A1-206ENST00000490831 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.12■□□□□ 0.49
COL27A1-206ENST00000490831 ZMYM6O95789 1325 aa18.12■□□□□ 0.49
COL27A1-206ENST00000490831 MKI67P46013 3256 aaKnown RBP18.12■□□□□ 0.49
COL27A1-206ENST00000490831 A0A0G2JMZ2 1700 aa18.12■□□□□ 0.49
COL27A1-206ENST00000490831 PRDM1O75626 825 aa18.11■□□□□ 0.49
COL27A1-206ENST00000490831 CCNA1P78396 465 aa18.11■□□□□ 0.49
COL27A1-206ENST00000490831 MTFR1Q15390 333 aa18.11■□□□□ 0.49
COL27A1-206ENST00000490831 ZNF589Q86UQ0 364 aaPredicted RBP18.11■□□□□ 0.49
COL27A1-206ENST00000490831 STK11IPQ8N1F8 1099 aa18.11■□□□□ 0.49
COL27A1-206ENST00000490831 NEDD1Q8NHV4 660 aa18.11■□□□□ 0.49
COL27A1-206ENST00000490831 USP6NLQ92738 828 aa18.11■□□□□ 0.49
COL27A1-206ENST00000490831 MKL1Q969V6 931 aa18.11■□□□□ 0.49
COL27A1-206ENST00000490831 GOPCQ9HD26 462 aa18.11■□□□□ 0.49
COL27A1-206ENST00000490831 BTBD7Q9P203 1132 aa18.11■□□□□ 0.49
COL27A1-206ENST00000490831 SYNPO2Q9UMS6 1093 aa18.11■□□□□ 0.49
COL27A1-206ENST00000490831 CCDC171Q6TFL3 1326 aa18.1■□□□□ 0.49
COL27A1-206ENST00000490831 FGRP09769 529 aa18.1■□□□□ 0.49
COL27A1-206ENST00000490831 HSPD1P10809 573 aaKnown RBP18.1■□□□□ 0.49
COL27A1-206ENST00000490831 DSG3P32926 999 aa18.1■□□□□ 0.49
COL27A1-206ENST00000490831 UBXN2AP68543 259 aa18.1■□□□□ 0.49
COL27A1-206ENST00000490831 SPICE1Q8N0Z3 855 aa18.1■□□□□ 0.49
COL27A1-206ENST00000490831 MB21D1Q8N884 522 aa18.1■□□□□ 0.49
COL27A1-206ENST00000490831 SOCS4Q8WXH5 440 aa18.1■□□□□ 0.49
COL27A1-206ENST00000490831 TANGO6Q9C0B7 1094 aa18.1■□□□□ 0.49
COL27A1-206ENST00000490831 MTMR4Q9NYA4 1195 aa18.1■□□□□ 0.49
COL27A1-206ENST00000490831 PARP14Q460N5 1801 aa18.09■□□□□ 0.49
COL27A1-206ENST00000490831 FGAP02671 866 aa18.09■□□□□ 0.49
COL27A1-206ENST00000490831 XRCC5P13010 732 aaKnown RBP18.09■□□□□ 0.49
COL27A1-206ENST00000490831 ELNP15502 786 aa18.09■□□□□ 0.49
COL27A1-206ENST00000490831 EN2P19622 333 aaPredicted RBP18.09■□□□□ 0.49
COL27A1-206ENST00000490831 ATP2B2Q01814 1243 aa18.09■□□□□ 0.49
COL27A1-206ENST00000490831 MORN1Q5T089 497 aa18.09■□□□□ 0.49
COL27A1-206ENST00000490831 GPR142Q7Z601 462 aa18.09■□□□□ 0.49
COL27A1-206ENST00000490831 PLEKHH3Q7Z736 793 aa18.09■□□□□ 0.49
COL27A1-206ENST00000490831 NUDT12Q9BQG2 462 aa18.09■□□□□ 0.49
COL27A1-206ENST00000490831 ADAMTS5Q9UNA0 930 aa18.09■□□□□ 0.49
COL27A1-206ENST00000490831 HIP1O00291 1037 aa18.08■□□□□ 0.48
COL27A1-206ENST00000490831 FLOT1O75955 427 aa18.08■□□□□ 0.48
COL27A1-206ENST00000490831 CCL5P13501 91 aa18.08■□□□□ 0.48
COL27A1-206ENST00000490831 MFAP1P55081 439 aaKnown RBP18.08■□□□□ 0.48
COL27A1-206ENST00000490831 CEP95Q96GE4 821 aa18.08■□□□□ 0.48
COL27A1-206ENST00000490831 BIN2Q9UBW5 565 aaPredicted RBP18.08■□□□□ 0.48
COL27A1-206ENST00000490831 TACC3Q9Y6A5 838 aa18.08■□□□□ 0.48
COL27A1-206ENST00000490831 ORC4O43929 436 aa18.07■□□□□ 0.48
COL27A1-206ENST00000490831 TTLL1O95922 423 aa18.07■□□□□ 0.48
COL27A1-206ENST00000490831 INHAP05111 366 aa18.07■□□□□ 0.48
COL27A1-206ENST00000490831 GJB1P08034 283 aa18.07■□□□□ 0.48
COL27A1-206ENST00000490831 TSPY3P0CV98 308 aa18.07■□□□□ 0.48
COL27A1-206ENST00000490831 TSPY8P0CW00 308 aa18.07■□□□□ 0.48
COL27A1-206ENST00000490831 CTDSPL2Q05D32 466 aa18.07■□□□□ 0.48
COL27A1-206ENST00000490831 TTC22Q5TAA0 569 aa18.07■□□□□ 0.48
COL27A1-206ENST00000490831 SHCBP1Q8NEM2 672 aa18.07■□□□□ 0.48
COL27A1-206ENST00000490831 ATG4CQ96DT6 458 aa18.07■□□□□ 0.48
COL27A1-206ENST00000490831 SPATC1LQ9H0A9 340 aa18.07■□□□□ 0.48
COL27A1-206ENST00000490831 CLIP2Q9UDT6 1046 aa18.07■□□□□ 0.48
COL27A1-206ENST00000490831 PDE4DIPQ5VU43 2346 aa18.06■□□□□ 0.48
COL27A1-206ENST00000490831 F5H6K3 240 aa18.06■□□□□ 0.48
COL27A1-206ENST00000490831 MYCP01106 439 aaPredicted RBP18.06■□□□□ 0.48
COL27A1-206ENST00000490831 HMGCRP04035 888 aa18.06■□□□□ 0.48
COL27A1-206ENST00000490831 GSPT1P15170 499 aaKnown RBP18.06■□□□□ 0.48
COL27A1-206ENST00000490831 GJA8P48165 433 aa18.06■□□□□ 0.48
COL27A1-206ENST00000490831 TFAP4Q01664 338 aa18.06■□□□□ 0.48
COL27A1-206ENST00000490831 KLRC3Q07444 240 aa18.06■□□□□ 0.48
COL27A1-206ENST00000490831 FAM47AQ5JRC9 791 aa18.06■□□□□ 0.48
COL27A1-206ENST00000490831 PPP4R3BQ5MIZ7 849 aa18.06■□□□□ 0.48
COL27A1-206ENST00000490831 CCAR1Q8IX12 1150 aaKnown RBP18.06■□□□□ 0.48
COL27A1-206ENST00000490831 NKX2-3Q8TAU0 364 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms