RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 VCPKMTQ9H867 229 aa11□□□□□ -0.65
SUPT20H-220ENST00000490716 B4GALNT3Q6L9W6 998 aa10.99□□□□□ -0.65
SUPT20H-220ENST00000490716 ZSCAN29Q8IWY8 852 aaPredicted RBP10.99□□□□□ -0.65
SUPT20H-220ENST00000490716 ZNF536O15090 1300 aa10.99□□□□□ -0.65
SUPT20H-220ENST00000490716 EEF2P13639 858 aaKnown RBP10.99□□□□□ -0.65
SUPT20H-220ENST00000490716 TAF1CQ15572 869 aaPredicted RBP10.99□□□□□ -0.65
SUPT20H-220ENST00000490716 OTUD7BQ6GQQ9 843 aa10.99□□□□□ -0.65
SUPT20H-220ENST00000490716 ERO1AQ96HE7 468 aa10.99□□□□□ -0.65
SUPT20H-220ENST00000490716 GMCL1Q96IK5 515 aa10.99□□□□□ -0.65
SUPT20H-220ENST00000490716 MCM3APO60318 1980 aa10.99□□□□□ -0.65
SUPT20H-220ENST00000490716 PTH1RQ03431 593 aa10.99□□□□□ -0.65
SUPT20H-220ENST00000490716 BTNL9Q6UXG8 535 aa10.99□□□□□ -0.65
SUPT20H-220ENST00000490716 FGD4Q96M96 766 aa10.99□□□□□ -0.65
SUPT20H-220ENST00000490716 HOXC6P09630 235 aa10.98□□□□□ -0.65
SUPT20H-220ENST00000490716 OSBPP22059 807 aa10.98□□□□□ -0.65
SUPT20H-220ENST00000490716 GCLCP48506 637 aaPredicted RBP10.98□□□□□ -0.65
SUPT20H-220ENST00000490716 PRMT2P55345 433 aa10.98□□□□□ -0.65
SUPT20H-220ENST00000490716 HERVK_113P62684 666 aa10.98□□□□□ -0.65
SUPT20H-220ENST00000490716 SEC23AQ15436 765 aa10.98□□□□□ -0.65
SUPT20H-220ENST00000490716 PAXIP1Q6ZW49 1069 aaPredicted RBP10.98□□□□□ -0.65
SUPT20H-220ENST00000490716 SHISA4Q96DD7 197 aa10.98□□□□□ -0.65
SUPT20H-220ENST00000490716 KANSL2Q9H9L4 492 aa10.98□□□□□ -0.65
SUPT20H-220ENST00000490716 ZNF214Q9UL59 606 aaPredicted RBP10.98□□□□□ -0.65
SUPT20H-220ENST00000490716 LRRFIP1Q32MZ4 808 aaKnown RBP10.98□□□□□ -0.65
SUPT20H-220ENST00000490716 TSGA10IPQ3SY00 556 aa10.98□□□□□ -0.65
SUPT20H-220ENST00000490716 CEP95Q96GE4 821 aa10.98□□□□□ -0.65
SUPT20H-220ENST00000490716 PEX10O60683 326 aa10.98□□□□□ -0.65
SUPT20H-220ENST00000490716 DSG3P32926 999 aa10.98□□□□□ -0.65
SUPT20H-220ENST00000490716 USP14P54578 494 aa10.98□□□□□ -0.65
SUPT20H-220ENST00000490716 GRM1Q13255 1194 aa10.98□□□□□ -0.65
SUPT20H-220ENST00000490716 SLC4A8Q2Y0W8 1093 aa10.98□□□□□ -0.65
SUPT20H-220ENST00000490716 GTF3C2Q8WUA4 911 aaPredicted RBP10.98□□□□□ -0.65
SUPT20H-220ENST00000490716 SRRDQ9UH36 339 aa10.98□□□□□ -0.65
SUPT20H-220ENST00000490716 GABRQQ9UN88 632 aa10.98□□□□□ -0.65
SUPT20H-220ENST00000490716 NECTIN1Q15223 517 aa10.97□□□□□ -0.65
SUPT20H-220ENST00000490716 STOX1Q6ZVD7 989 aa10.97□□□□□ -0.65
SUPT20H-220ENST00000490716 PXYLP1Q8TE99 480 aa10.97□□□□□ -0.65
SUPT20H-220ENST00000490716 CPA4Q9UI42 421 aa10.97□□□□□ -0.65
SUPT20H-220ENST00000490716 WDR46O15213 610 aaKnown RBP10.97□□□□□ -0.65
SUPT20H-220ENST00000490716 POLR3DP05423 398 aaPredicted RBP10.97□□□□□ -0.65
SUPT20H-220ENST00000490716 GRB14Q14449 540 aa10.97□□□□□ -0.65
SUPT20H-220ENST00000490716 NID2Q14112 1375 aa10.97□□□□□ -0.65
SUPT20H-220ENST00000490716 DNAJC25-GNG10A0A024R161 153 aa10.97□□□□□ -0.65
SUPT20H-220ENST00000490716 CTDSPL2Q05D32 466 aa10.97□□□□□ -0.65
SUPT20H-220ENST00000490716 SLC35G1Q2M3R5 365 aa10.97□□□□□ -0.65
SUPT20H-220ENST00000490716 CRISPLD2Q9H0B8 497 aa10.97□□□□□ -0.65
SUPT20H-220ENST00000490716 USP17L15C9J2P7 530 aa10.96□□□□□ -0.65
SUPT20H-220ENST00000490716 USP17L13C9JLJ4 530 aa10.96□□□□□ -0.65
SUPT20H-220ENST00000490716 USP17L11C9JVI0 530 aa10.96□□□□□ -0.65
SUPT20H-220ENST00000490716 USP17L18D6R9N7 530 aa10.96□□□□□ -0.65
SUPT20H-220ENST00000490716 USP17L22D6RA61 530 aa10.96□□□□□ -0.65
SUPT20H-220ENST00000490716 USP17L17D6RBQ6 530 aa10.96□□□□□ -0.65
SUPT20H-220ENST00000490716 USP17L19D6RCP7 530 aa10.96□□□□□ -0.65
SUPT20H-220ENST00000490716 USP17L20D6RJB6 530 aa10.96□□□□□ -0.65
SUPT20H-220ENST00000490716 HIP1O00291 1037 aa10.96□□□□□ -0.65
SUPT20H-220ENST00000490716 XRCC5P13010 732 aaKnown RBP10.96□□□□□ -0.65
SUPT20H-220ENST00000490716 GHRHRQ02643 423 aa10.96□□□□□ -0.65
SUPT20H-220ENST00000490716 USP17L24Q0WX57 530 aa10.96□□□□□ -0.65
SUPT20H-220ENST00000490716 SHCBP1Q8NEM2 672 aa10.96□□□□□ -0.65
SUPT20H-220ENST00000490716 MTMR8Q96EF0 704 aa10.96□□□□□ -0.65
SUPT20H-220ENST00000490716 PAK6Q9NQU5 681 aaPredicted RBP10.96□□□□□ -0.65
SUPT20H-220ENST00000490716 RABGAP1Q9Y3P9 1069 aa10.96□□□□□ -0.65
SUPT20H-220ENST00000490716 WDR81Q562E7 1941 aa10.96□□□□□ -0.66
SUPT20H-220ENST00000490716 ERVK-9P63128 1117 aa10.96□□□□□ -0.66
SUPT20H-220ENST00000490716 ERVK-24P63145 666 aa10.96□□□□□ -0.66
SUPT20H-220ENST00000490716 TNS4Q8IZW8 715 aa10.96□□□□□ -0.66
SUPT20H-220ENST00000490716 CRACR2BQ8N4Y2 399 aaPredicted RBP10.96□□□□□ -0.66
SUPT20H-220ENST00000490716 PORCNQ9H237 461 aa10.96□□□□□ -0.66
SUPT20H-220ENST00000490716 PTCH2Q9Y6C5 1203 aa10.96□□□□□ -0.66
SUPT20H-220ENST00000490716 NMT2O60551 498 aa10.95□□□□□ -0.66
SUPT20H-220ENST00000490716 RPAP3Q9H6T3 665 aaPredicted RBP10.95□□□□□ -0.66
SUPT20H-220ENST00000490716 CYP21A2P08686 494 aa10.95□□□□□ -0.66
SUPT20H-220ENST00000490716 TMEM132BQ14DG7 1078 aa10.95□□□□□ -0.66
SUPT20H-220ENST00000490716 ASTN1O14525 1302 aa10.95□□□□□ -0.66
SUPT20H-220ENST00000490716 ANTXR2P58335 489 aa10.95□□□□□ -0.66
SUPT20H-220ENST00000490716 NKX3-2P78367 333 aa10.95□□□□□ -0.66
SUPT20H-220ENST00000490716 ICA1Q05084 483 aa10.95□□□□□ -0.66
SUPT20H-220ENST00000490716 AKNAD1Q5T1N1 836 aa10.95□□□□□ -0.66
SUPT20H-220ENST00000490716 FBXL16Q8N461 479 aa10.95□□□□□ -0.66
SUPT20H-220ENST00000490716 BEGAINQ9BUH8 593 aa10.95□□□□□ -0.66
SUPT20H-220ENST00000490716 FLRT1Q9NZU1 646 aa10.95□□□□□ -0.66
SUPT20H-220ENST00000490716 PNMA3Q9UL41 463 aa10.95□□□□□ -0.66
SUPT20H-220ENST00000490716 PPP1R9AQ9ULJ8 1098 aa10.95□□□□□ -0.66
SUPT20H-220ENST00000490716 LAMA2P24043 3122 aaKnown RBP10.95□□□□□ -0.66
SUPT20H-220ENST00000490716 VWA5AO00534 786 aa10.94□□□□□ -0.66
SUPT20H-220ENST00000490716 NDUFB10O96000 172 aa10.94□□□□□ -0.66
SUPT20H-220ENST00000490716 GADL1Q6ZQY3 521 aa10.94□□□□□ -0.66
SUPT20H-220ENST00000490716 RASGRP2Q7LDG7 609 aa10.94□□□□□ -0.66
SUPT20H-220ENST00000490716 ABRAQ8N0Z2 381 aa10.94□□□□□ -0.66
SUPT20H-220ENST00000490716 KATNBL1Q9H079 304 aa10.94□□□□□ -0.66
SUPT20H-220ENST00000490716 ESYT1Q9BSJ8 1104 aa10.94□□□□□ -0.66
SUPT20H-220ENST00000490716 SLC38A10Q9HBR0 1119 aa10.94□□□□□ -0.66
SUPT20H-220ENST00000490716 TTLL1O95922 423 aa10.94□□□□□ -0.66
SUPT20H-220ENST00000490716 PRKCZQ05513 592 aa10.94□□□□□ -0.66
SUPT20H-220ENST00000490716 MB21D2Q8IYB1 491 aaPredicted RBP10.94□□□□□ -0.66
SUPT20H-220ENST00000490716 TTC14Q96N46 770 aa10.94□□□□□ -0.66
SUPT20H-220ENST00000490716 CWC27Q6UX04 472 aaKnown RBP10.93□□□□□ -0.66
SUPT20H-220ENST00000490716 CYB5R4Q7L1T6 521 aa10.93□□□□□ -0.66
SUPT20H-220ENST00000490716 ANKRD13CQ8N6S4 541 aa10.93□□□□□ -0.66
SUPT20H-220ENST00000490716 RANBP2P49792 3224 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms