RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.18■□□□□ 0.82
RAPGEF3-212ENST00000490387 MKNK2Q9HBH9 465 aa20.18■□□□□ 0.82
RAPGEF3-212ENST00000490387 PNMA3Q9UL41 463 aa20.18■□□□□ 0.82
RAPGEF3-212ENST00000490387 ZBTB21Q9ULJ3 1066 aa20.18■□□□□ 0.82
RAPGEF3-212ENST00000490387 POTEFA5A3E0 1075 aa20.17■□□□□ 0.82
RAPGEF3-212ENST00000490387 E7EWF7 191 aa20.17■□□□□ 0.82
RAPGEF3-212ENST00000490387 ASNSP08243 561 aa20.17■□□□□ 0.82
RAPGEF3-212ENST00000490387 HMGCS2P54868 508 aa20.17■□□□□ 0.82
RAPGEF3-212ENST00000490387 FCGRTP55899 365 aa20.17■□□□□ 0.82
RAPGEF3-212ENST00000490387 ABCB5Q2M3G0 1257 aa20.17■□□□□ 0.82
RAPGEF3-212ENST00000490387 TREML2Q5T2D2 321 aa20.17■□□□□ 0.82
RAPGEF3-212ENST00000490387 RNF20Q5VTR2 975 aa20.17■□□□□ 0.82
RAPGEF3-212ENST00000490387 BACH2Q9BYV9 841 aa20.17■□□□□ 0.82
RAPGEF3-212ENST00000490387 GH2P01242 217 aa20.16■□□□□ 0.82
RAPGEF3-212ENST00000490387 OSBPP22059 807 aa20.16■□□□□ 0.82
RAPGEF3-212ENST00000490387 NT5C2P49902 561 aa20.16■□□□□ 0.82
RAPGEF3-212ENST00000490387 SH3TC2Q8TF17 1288 aa20.16■□□□□ 0.82
RAPGEF3-212ENST00000490387 TMEM106CQ9BVX2 250 aa20.16■□□□□ 0.82
RAPGEF3-212ENST00000490387 SRRDQ9UH36 339 aa20.16■□□□□ 0.82
RAPGEF3-212ENST00000490387 MYPNQ86TC9 1320 aa20.16■□□□□ 0.82
RAPGEF3-212ENST00000490387 IGKV6D-41A0A0C4DH26 115 aa20.15■□□□□ 0.82
RAPGEF3-212ENST00000490387 PABPC4Q13310 644 aaKnown RBP eCLIP20.15■□□□□ 0.82
RAPGEF3-212ENST00000490387 TMEM179Q6ZVK1 233 aa20.15■□□□□ 0.82
RAPGEF3-212ENST00000490387 ZNF444Q8N0Y2 327 aaPredicted RBP20.15■□□□□ 0.82
RAPGEF3-212ENST00000490387 NEDD1Q8NHV4 660 aa20.15■□□□□ 0.82
RAPGEF3-212ENST00000490387 RAET1EQ8TD07 263 aa20.15■□□□□ 0.82
RAPGEF3-212ENST00000490387 CNNM2Q9H8M5 875 aa20.15■□□□□ 0.82
RAPGEF3-212ENST00000490387 MYCP01106 439 aaPredicted RBP20.14■□□□□ 0.81
RAPGEF3-212ENST00000490387 TFAP4Q01664 338 aa20.14■□□□□ 0.81
RAPGEF3-212ENST00000490387 MTMR2Q13614 643 aa20.14■□□□□ 0.81
RAPGEF3-212ENST00000490387 FAM47AQ5JRC9 791 aa20.14■□□□□ 0.81
RAPGEF3-212ENST00000490387 IL17RAQ96F46 866 aa20.14■□□□□ 0.81
RAPGEF3-212ENST00000490387 WDR18Q9BV38 432 aa20.14■□□□□ 0.81
RAPGEF3-212ENST00000490387 KRT23Q9C075 422 aa20.14■□□□□ 0.81
RAPGEF3-212ENST00000490387 SNX14Q9Y5W7 946 aa20.14■□□□□ 0.81
RAPGEF3-212ENST00000490387 B4E1Z4 1266 aa20.13■□□□□ 0.81
RAPGEF3-212ENST00000490387 RANBP6O60518 1105 aaKnown RBP20.13■□□□□ 0.81
RAPGEF3-212ENST00000490387 ZKSCAN1P17029 563 aaPredicted RBP20.13■□□□□ 0.81
RAPGEF3-212ENST00000490387 COL9A3Q14050 684 aaPredicted RBP20.13■□□□□ 0.81
RAPGEF3-212ENST00000490387 SEPT2Q15019 361 aa20.13■□□□□ 0.81
RAPGEF3-212ENST00000490387 SH3D19Q5HYK7 790 aa20.13■□□□□ 0.81
RAPGEF3-212ENST00000490387 RRP12Q5JTH9 1297 aaKnown RBP20.13■□□□□ 0.81
RAPGEF3-212ENST00000490387 MB21D2Q8IYB1 491 aaPredicted RBP20.13■□□□□ 0.81
RAPGEF3-212ENST00000490387 ANKRD13CQ8N6S4 541 aa20.13■□□□□ 0.81
RAPGEF3-212ENST00000490387 ESR2Q92731 530 aa20.13■□□□□ 0.81
RAPGEF3-212ENST00000490387 CABP5Q9NP86 173 aa20.13■□□□□ 0.81
RAPGEF3-212ENST00000490387 TMOD4Q9NZQ9 345 aa20.13■□□□□ 0.81
RAPGEF3-212ENST00000490387 MYH4Q9Y623 1939 aa20.12■□□□□ 0.81
RAPGEF3-212ENST00000490387 MPHOSPH10O00566 681 aaKnown RBP20.12■□□□□ 0.81
RAPGEF3-212ENST00000490387 KDM4AO75164 1064 aa20.12■□□□□ 0.81
RAPGEF3-212ENST00000490387 TSPY3P0CV98 308 aa20.12■□□□□ 0.81
RAPGEF3-212ENST00000490387 TSPY8P0CW00 308 aa20.12■□□□□ 0.81
RAPGEF3-212ENST00000490387 NOVP48745 357 aa20.12■□□□□ 0.81
RAPGEF3-212ENST00000490387 BACE1P56817 501 aa20.12■□□□□ 0.81
RAPGEF3-212ENST00000490387 PRKCZQ05513 592 aa20.12■□□□□ 0.81
RAPGEF3-212ENST00000490387 ADCK5Q3MIX3 580 aa20.12■□□□□ 0.81
RAPGEF3-212ENST00000490387 CLEC10AQ8IUN9 316 aa20.12■□□□□ 0.81
RAPGEF3-212ENST00000490387 SIAH1Q8IUQ4 282 aa20.12■□□□□ 0.81
RAPGEF3-212ENST00000490387 NCOA7Q8NI08 942 aa20.12■□□□□ 0.81
RAPGEF3-212ENST00000490387 IL17RBQ9NRM6 502 aa20.12■□□□□ 0.81
RAPGEF3-212ENST00000490387 TOMM22Q9NS69 142 aa20.12■□□□□ 0.81
RAPGEF3-212ENST00000490387 TCP11L1Q9NUJ3 509 aa20.12■□□□□ 0.81
RAPGEF3-212ENST00000490387 DOCK3Q8IZD9 2030 aa20.11■□□□□ 0.81
RAPGEF3-212ENST00000490387 TSPY2A6NKD2 308 aa20.11■□□□□ 0.81
RAPGEF3-212ENST00000490387 EN2P19622 333 aaPredicted RBP20.11■□□□□ 0.81
RAPGEF3-212ENST00000490387 KRT32Q14532 448 aa20.11■□□□□ 0.81
RAPGEF3-212ENST00000490387 CYB5R4Q7L1T6 521 aa20.11■□□□□ 0.81
RAPGEF3-212ENST00000490387 KANSL2Q9H9L4 492 aa20.11■□□□□ 0.81
RAPGEF3-212ENST00000490387 ZSWIM5Q9P217 1185 aa20.11■□□□□ 0.81
RAPGEF3-212ENST00000490387 BRCA2P51587 3418 aa20.11■□□□□ 0.81
RAPGEF3-212ENST00000490387 C19orf81C9J6K1 198 aa20.1■□□□□ 0.81
RAPGEF3-212ENST00000490387 USP17L10C9JJH3 530 aa20.1■□□□□ 0.81
RAPGEF3-212ENST00000490387 TNPO2O14787 897 aaKnown RBP20.1■□□□□ 0.81
RAPGEF3-212ENST00000490387 NMT2O60551 498 aa20.1■□□□□ 0.81
RAPGEF3-212ENST00000490387 MCCP23508 829 aa20.1■□□□□ 0.81
RAPGEF3-212ENST00000490387 GRK4P32298 578 aa20.1■□□□□ 0.81
RAPGEF3-212ENST00000490387 GCLCP48506 637 aaPredicted RBP20.1■□□□□ 0.81
RAPGEF3-212ENST00000490387 ANAPC15P60006 121 aa20.1■□□□□ 0.81
RAPGEF3-212ENST00000490387 TRDNQ13061 729 aa20.1■□□□□ 0.81
RAPGEF3-212ENST00000490387 RAB3GAP1Q15042 981 aa20.1■□□□□ 0.81
RAPGEF3-212ENST00000490387 FAM110CQ1W6H9 321 aa20.1■□□□□ 0.81
RAPGEF3-212ENST00000490387 CEP95Q96GE4 821 aa20.1■□□□□ 0.81
RAPGEF3-212ENST00000490387 ASCC2Q9H1I8 757 aaPredicted RBP20.1■□□□□ 0.81
RAPGEF3-212ENST00000490387 MTMR4Q9NYA4 1195 aa20.1■□□□□ 0.81
RAPGEF3-212ENST00000490387 ANTXR2P58335 489 aa20.09■□□□□ 0.81
RAPGEF3-212ENST00000490387 IRX3P78415 501 aaPredicted RBP20.09■□□□□ 0.81
RAPGEF3-212ENST00000490387 ICA1Q05084 483 aa20.09■□□□□ 0.81
RAPGEF3-212ENST00000490387 RALYLQ86SE5 291 aaKnown RBP20.09■□□□□ 0.81
RAPGEF3-212ENST00000490387 GABRQQ9UN88 632 aa20.09■□□□□ 0.81
RAPGEF3-212ENST00000490387 A0A1W2PRG0 241 aa20.08■□□□□ 0.81
RAPGEF3-212ENST00000490387 RBM25P49756 843 aaKnown RBP20.08■□□□□ 0.81
RAPGEF3-212ENST00000490387 RCSD1Q6JBY9 416 aa20.08■□□□□ 0.81
RAPGEF3-212ENST00000490387 ACER1Q8TDN7 264 aa20.08■□□□□ 0.81
RAPGEF3-212ENST00000490387 NEK1Q96PY6 1258 aa20.08■□□□□ 0.81
RAPGEF3-212ENST00000490387 NYAP2Q9P242 653 aa20.08■□□□□ 0.81
RAPGEF3-212ENST00000490387 BIN2Q9UBW5 565 aaPredicted RBP20.08■□□□□ 0.81
RAPGEF3-212ENST00000490387 EEF2P13639 858 aaKnown RBP20.07■□□□□ 0.8
RAPGEF3-212ENST00000490387 EXOSC10Q01780 885 aaKnown RBP20.07■□□□□ 0.8
RAPGEF3-212ENST00000490387 PRPF38BQ5VTL8 546 aaKnown RBP20.07■□□□□ 0.8
RAPGEF3-212ENST00000490387 USP17L2Q6R6M4 530 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms