RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 FERMT2Q96AC1 680 aa18.42■□□□□ 0.54
SNX5-214ENST00000490175 LZTS2Q9BRK4 669 aa18.42■□□□□ 0.54
SNX5-214ENST00000490175 TMX4Q9H1E5 349 aaPredicted RBP18.42■□□□□ 0.54
SNX5-214ENST00000490175 A0A087WWV3 80 aa18.42■□□□□ 0.54
SNX5-214ENST00000490175 SMTNL1A8MU46 457 aa18.42■□□□□ 0.54
SNX5-214ENST00000490175 CDK8P49336 464 aa18.42■□□□□ 0.54
SNX5-214ENST00000490175 TPM4P67936 248 aa18.42■□□□□ 0.54
SNX5-214ENST00000490175 LONRF3Q496Y0 759 aa18.42■□□□□ 0.54
SNX5-214ENST00000490175 MASTLQ96GX5 879 aa18.42■□□□□ 0.54
SNX5-214ENST00000490175 CLIP2Q9UDT6 1046 aa18.42■□□□□ 0.54
SNX5-214ENST00000490175 RGPD3A6NKT7 1758 aaPredicted RBP18.41■□□□□ 0.54
SNX5-214ENST00000490175 RGPD4Q7Z3J3 1758 aa18.41■□□□□ 0.54
SNX5-214ENST00000490175 USP17L3A6NCW0 530 aa18.41■□□□□ 0.54
SNX5-214ENST00000490175 USP17L4A6NCW7 530 aa18.41■□□□□ 0.54
SNX5-214ENST00000490175 IKBKBO14920 756 aa18.41■□□□□ 0.54
SNX5-214ENST00000490175 COL11A2P13942 1736 aaPredicted RBP18.41■□□□□ 0.54
SNX5-214ENST00000490175 NLRP5P59047 1200 aa18.41■□□□□ 0.54
SNX5-214ENST00000490175 KANK3Q6NY19 840 aa18.41■□□□□ 0.54
SNX5-214ENST00000490175 USP17L1Q7RTZ2 530 aa18.41■□□□□ 0.54
SNX5-214ENST00000490175 METTL16Q86W50 562 aaKnown RBP18.41■□□□□ 0.54
SNX5-214ENST00000490175 NEDD1Q8NHV4 660 aa18.41■□□□□ 0.54
SNX5-214ENST00000490175 SNED1Q8TER0 1413 aa18.41■□□□□ 0.54
SNX5-214ENST00000490175 MAP7D2Q96T17 732 aa18.41■□□□□ 0.54
SNX5-214ENST00000490175 KCNF1Q9H3M0 494 aa18.41■□□□□ 0.54
SNX5-214ENST00000490175 DAGLAQ9Y4D2 1042 aa18.41■□□□□ 0.54
SNX5-214ENST00000490175 DPP8Q6V1X1 898 aaPredicted RBP18.4■□□□□ 0.54
SNX5-214ENST00000490175 SLC44A5Q8NCS7 719 aa18.4■□□□□ 0.54
SNX5-214ENST00000490175 EYA3Q99504 573 aa18.4■□□□□ 0.54
SNX5-214ENST00000490175 MAD2L2Q9UI95 211 aa18.4■□□□□ 0.54
SNX5-214ENST00000490175 BIN1O00499 593 aa18.4■□□□□ 0.54
SNX5-214ENST00000490175 MMP10P09238 476 aa18.4■□□□□ 0.54
SNX5-214ENST00000490175 ATP2B1P20020 1258 aa18.4■□□□□ 0.54
SNX5-214ENST00000490175 EARS2Q5JPH6 523 aaKnown RBP18.4■□□□□ 0.54
SNX5-214ENST00000490175 TMEM47Q9BQJ4 181 aa18.4■□□□□ 0.54
SNX5-214ENST00000490175 SPTLC3Q9NUV7 552 aa18.4■□□□□ 0.54
SNX5-214ENST00000490175 FAM205CA6NFA0 338 aa18.39■□□□□ 0.53
SNX5-214ENST00000490175 RIMBP2O15034 1052 aa18.39■□□□□ 0.53
SNX5-214ENST00000490175 MDM2Q00987 491 aaPredicted RBP18.39■□□□□ 0.53
SNX5-214ENST00000490175 GRIN1Q05586 938 aa18.39■□□□□ 0.53
SNX5-214ENST00000490175 PNOCQ13519 176 aa18.39■□□□□ 0.53
SNX5-214ENST00000490175 NOLC1Q14978 699 aaKnown RBP eCLIP18.39■□□□□ 0.531e-323■□□□□ 10.4
SNX5-214ENST00000490175 TTC38Q5R3I4 469 aa18.39■□□□□ 0.53
SNX5-214ENST00000490175 CCDC186Q7Z3E2 898 aa18.39■□□□□ 0.53
SNX5-214ENST00000490175 KIAA1524Q8TCG1 905 aa18.39■□□□□ 0.53
SNX5-214ENST00000490175 FBXW7Q969H0 707 aa18.39■□□□□ 0.53
SNX5-214ENST00000490175 CCDC34Q96HJ3 373 aa18.39■□□□□ 0.53
SNX5-214ENST00000490175 PALM3A6NDB9 673 aaPredicted RBP18.39■□□□□ 0.53
SNX5-214ENST00000490175 PTGS1P23219 599 aa18.39■□□□□ 0.53
SNX5-214ENST00000490175 GALNT17Q6IS24 598 aa18.39■□□□□ 0.53
SNX5-214ENST00000490175 CSRNP2Q9H175 543 aa18.39■□□□□ 0.53
SNX5-214ENST00000490175 STX8Q9UNK0 236 aa18.39■□□□□ 0.53
SNX5-214ENST00000490175 UQCRHLA0A096LP55 91 aa18.38■□□□□ 0.53
SNX5-214ENST00000490175 POLR2DO15514 142 aaKnown RBP18.38■□□□□ 0.53
SNX5-214ENST00000490175 UQCRHP07919 91 aa18.38■□□□□ 0.53
SNX5-214ENST00000490175 NOVP48745 357 aa18.38■□□□□ 0.53
SNX5-214ENST00000490175 SPECC1Q5M775 1068 aa18.38■□□□□ 0.53
SNX5-214ENST00000490175 NT5DC1Q5TFE4 455 aa18.38■□□□□ 0.53
SNX5-214ENST00000490175 STAG2Q8N3U4 1231 aa18.38■□□□□ 0.53
SNX5-214ENST00000490175 CCDC148Q8NFR7 591 aa18.38■□□□□ 0.53
SNX5-214ENST00000490175 PLIN4Q96Q06 1357 aa18.37■□□□□ 0.53
SNX5-214ENST00000490175 DYNC1I1O14576 645 aa18.37■□□□□ 0.53
SNX5-214ENST00000490175 SMARCA1P28370 1054 aa18.37■□□□□ 0.53
SNX5-214ENST00000490175 ATP2C1P98194 919 aaPredicted RBP18.37■□□□□ 0.53
SNX5-214ENST00000490175 POSTNQ15063 836 aa18.37■□□□□ 0.53
SNX5-214ENST00000490175 OLFM4Q6UX06 510 aa18.37■□□□□ 0.53
SNX5-214ENST00000490175 BLIDQ8IZY5 108 aa18.37■□□□□ 0.53
SNX5-214ENST00000490175 PCDHA4Q9UN74 947 aa18.37■□□□□ 0.53
SNX5-214ENST00000490175 PCDHA5Q9Y5H7 936 aa18.37■□□□□ 0.53
SNX5-214ENST00000490175 BAZ2BQ9UIF8 2168 aaKnown RBP18.37■□□□□ 0.53
SNX5-214ENST00000490175 TNS1Q9HBL0 1735 aaKnown RBP18.37■□□□□ 0.53
SNX5-214ENST00000490175 MYO1BO43795 1136 aa18.37■□□□□ 0.53
SNX5-214ENST00000490175 NEMFO60524 1076 aa18.37■□□□□ 0.53
SNX5-214ENST00000490175 TOP1P11387 765 aaKnown RBP18.37■□□□□ 0.53
SNX5-214ENST00000490175 NCAPHQ15003 741 aa18.37■□□□□ 0.53
SNX5-214ENST00000490175 DAGLBQ8NCG7 672 aa18.37■□□□□ 0.53
SNX5-214ENST00000490175 SPZ1Q9BXG8 430 aa18.37■□□□□ 0.53
SNX5-214ENST00000490175 HHIPL2Q6UWX4 724 aa18.36■□□□□ 0.53
SNX5-214ENST00000490175 TRIML1Q8N9V2 468 aa18.36■□□□□ 0.53
SNX5-214ENST00000490175 SERTAD1Q9UHV2 236 aa18.36■□□□□ 0.53
SNX5-214ENST00000490175 ACTN4O43707 911 aaKnown RBP18.35■□□□□ 0.53
SNX5-214ENST00000490175 PIK3AP1Q6ZUJ8 805 aa18.35■□□□□ 0.53
SNX5-214ENST00000490175 MTERF4Q7Z6M4 381 aaKnown RBP18.35■□□□□ 0.53
SNX5-214ENST00000490175 FOXP4Q8IVH2 680 aaPredicted RBP18.35■□□□□ 0.53
SNX5-214ENST00000490175 CERS5Q8N5B7 392 aa18.35■□□□□ 0.53
SNX5-214ENST00000490175 NRBP1Q9UHY1 535 aa18.35■□□□□ 0.53
SNX5-214ENST00000490175 TTF2Q9UNY4 1162 aaKnown RBP18.35■□□□□ 0.53
SNX5-214ENST00000490175 G3V3G9 751 aa18.35■□□□□ 0.53
SNX5-214ENST00000490175 SARSP49591 514 aaKnown RBP18.35■□□□□ 0.53
SNX5-214ENST00000490175 MYL5Q02045 173 aa18.35■□□□□ 0.53
SNX5-214ENST00000490175 ZNF174Q15697 407 aa18.35■□□□□ 0.53
SNX5-214ENST00000490175 DCAF8Q5TAQ9 597 aa18.35■□□□□ 0.53
SNX5-214ENST00000490175 STYK1Q6J9G0 422 aa18.35■□□□□ 0.53
SNX5-214ENST00000490175 PODNQ7Z5L7 613 aa18.35■□□□□ 0.53
SNX5-214ENST00000490175 PYM1Q9BRP8 204 aaKnown RBP18.35■□□□□ 0.53
SNX5-214ENST00000490175 BARHL2Q9NY43 387 aa18.35■□□□□ 0.53
SNX5-214ENST00000490175 PYCARDQ9ULZ3 195 aa18.35■□□□□ 0.53
SNX5-214ENST00000490175 MYO3BQ8WXR4 1341 aa18.35■□□□□ 0.53
SNX5-214ENST00000490175 KLRF2D3W0D1 207 aa18.34■□□□□ 0.53
SNX5-214ENST00000490175 PARP1P09874 1014 aaKnown RBP18.34■□□□□ 0.53
SNX5-214ENST00000490175 VEGFAP15692 232 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms