RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 CCDC129Q6ZRS4 1044 aa12.56□□□□□ -0.4
SCAMP4-208ENST00000489554 CCAR1Q8IX12 1150 aaKnown RBP12.56□□□□□ -0.4
SCAMP4-208ENST00000489554 NKX2-3Q8TAU0 364 aa12.56□□□□□ -0.4
SCAMP4-208ENST00000489554 LPAR1Q92633 364 aa12.56□□□□□ -0.4
SCAMP4-208ENST00000489554 NACAP1Q9BZK3 213 aa12.56□□□□□ -0.4
SCAMP4-208ENST00000489554 RPAP3Q9H6T3 665 aaPredicted RBP12.56□□□□□ -0.4
SCAMP4-208ENST00000489554 ZNF287Q9HBT7 754 aa12.56□□□□□ -0.4
SCAMP4-208ENST00000489554 TXNRD2Q9NNW7 524 aa12.56□□□□□ -0.4
SCAMP4-208ENST00000489554 HELLSQ9NRZ9 838 aa12.56□□□□□ -0.4
SCAMP4-208ENST00000489554 DIAPH3Q9NSV4 1193 aa12.56□□□□□ -0.4
SCAMP4-208ENST00000489554 RABGAP1Q9Y3P9 1069 aa12.56□□□□□ -0.4
SCAMP4-208ENST00000489554 MGAMO43451 1857 aa12.56□□□□□ -0.4
SCAMP4-208ENST00000489554 RAD50Q92878 1312 aa12.56□□□□□ -0.4
SCAMP4-208ENST00000489554 ROBO3Q96MS0 1386 aa12.56□□□□□ -0.4
SCAMP4-208ENST00000489554 A0A1W2PRG0 241 aa12.55□□□□□ -0.4
SCAMP4-208ENST00000489554 PATL2C9JE40 543 aaKnown RBP12.55□□□□□ -0.4
SCAMP4-208ENST00000489554 SMIM22K7EJ46 135 aa12.55□□□□□ -0.4
SCAMP4-208ENST00000489554 APPP05067 770 aa12.55□□□□□ -0.4
SCAMP4-208ENST00000489554 CCL5P13501 91 aa12.55□□□□□ -0.4
SCAMP4-208ENST00000489554 TDO2P48775 406 aa12.55□□□□□ -0.4
SCAMP4-208ENST00000489554 CCNA1P78396 465 aa12.55□□□□□ -0.4
SCAMP4-208ENST00000489554 MTFR1Q15390 333 aa12.55□□□□□ -0.4
SCAMP4-208ENST00000489554 SOCS4Q8WXH5 440 aa12.55□□□□□ -0.4
SCAMP4-208ENST00000489554 PAGR1Q9BTK6 254 aa12.55□□□□□ -0.4
SCAMP4-208ENST00000489554 LSG1Q9H089 658 aaKnown RBP12.55□□□□□ -0.4
SCAMP4-208ENST00000489554 KANSL2Q9H9L4 492 aa12.55□□□□□ -0.4
SCAMP4-208ENST00000489554 EPB41L4AQ9HCS5 686 aaPredicted RBP12.55□□□□□ -0.4
SCAMP4-208ENST00000489554 GJD2Q9UKL4 321 aa12.55□□□□□ -0.4
SCAMP4-208ENST00000489554 TMX2Q9Y320 296 aa12.55□□□□□ -0.4
SCAMP4-208ENST00000489554 BAZ2AQ9UIF9 1905 aaKnown RBP12.54□□□□□ -0.4
SCAMP4-208ENST00000489554 KIAA0100Q14667 2235 aaKnown RBP12.54□□□□□ -0.4
SCAMP4-208ENST00000489554 MINDY4BA8MYZ0 360 aa12.54□□□□□ -0.4
SCAMP4-208ENST00000489554 INHAP05111 366 aa12.54□□□□□ -0.4
SCAMP4-208ENST00000489554 GJB1P08034 283 aa12.54□□□□□ -0.4
SCAMP4-208ENST00000489554 ELNP15502 786 aa12.54□□□□□ -0.4
SCAMP4-208ENST00000489554 CAPN2P17655 700 aa12.54□□□□□ -0.4
SCAMP4-208ENST00000489554 MCMDC2Q4G0Z9 681 aa12.54□□□□□ -0.4
SCAMP4-208ENST00000489554 IFNL3Q8IZI9 196 aa12.54□□□□□ -0.4
SCAMP4-208ENST00000489554 NUDT12Q9BQG2 462 aa12.54□□□□□ -0.4
SCAMP4-208ENST00000489554 TANGO6Q9C0B7 1094 aa12.54□□□□□ -0.4
SCAMP4-208ENST00000489554 RNF208Q9H0X6 261 aa12.54□□□□□ -0.4
SCAMP4-208ENST00000489554 VCPKMTQ9H867 229 aa12.54□□□□□ -0.4
SCAMP4-208ENST00000489554 MKNK2Q9HBH9 465 aa12.54□□□□□ -0.4
SCAMP4-208ENST00000489554 HOXC10Q9NYD6 342 aa12.54□□□□□ -0.4
SCAMP4-208ENST00000489554 SPDYE16A6NNV3 312 aaPredicted RBP12.53□□□□□ -0.4
SCAMP4-208ENST00000489554 PEX10O60683 326 aa12.53□□□□□ -0.4
SCAMP4-208ENST00000489554 HMGCRP04035 888 aa12.53□□□□□ -0.4
SCAMP4-208ENST00000489554 EEF2P13639 858 aaKnown RBP12.53□□□□□ -0.4
SCAMP4-208ENST00000489554 GJA8P48165 433 aa12.53□□□□□ -0.4
SCAMP4-208ENST00000489554 PTH1RQ03431 593 aa12.53□□□□□ -0.4
SCAMP4-208ENST00000489554 COG2Q14746 738 aa12.53□□□□□ -0.4
SCAMP4-208ENST00000489554 Q3C1V9 767 aa12.53□□□□□ -0.4
SCAMP4-208ENST00000489554 VPS53Q5VIR6 699 aa12.53□□□□□ -0.4
SCAMP4-208ENST00000489554 PRPF38BQ5VTL8 546 aaKnown RBP12.53□□□□□ -0.4
SCAMP4-208ENST00000489554 POTEEQ6S8J3 1075 aa12.53□□□□□ -0.4
SCAMP4-208ENST00000489554 CLEC10AQ8IUN9 316 aa12.53□□□□□ -0.4
SCAMP4-208ENST00000489554 SIAH1Q8IUQ4 282 aa12.53□□□□□ -0.4
SCAMP4-208ENST00000489554 NAPBQ9H115 298 aa12.53□□□□□ -0.4
SCAMP4-208ENST00000489554 PORCNQ9H237 461 aa12.53□□□□□ -0.4
SCAMP4-208ENST00000489554 CWC22Q9HCG8 908 aaKnown RBP12.53□□□□□ -0.4
SCAMP4-208ENST00000489554 CCDC171Q6TFL3 1326 aa12.53□□□□□ -0.4
SCAMP4-208ENST00000489554 WDR46O15213 610 aaKnown RBP12.52□□□□□ -0.41
SCAMP4-208ENST00000489554 CNMDO75829 334 aa12.52□□□□□ -0.41
SCAMP4-208ENST00000489554 SLC3A2P08195 630 aaKnown RBP12.52□□□□□ -0.41
SCAMP4-208ENST00000489554 XRCC5P13010 732 aaKnown RBP12.52□□□□□ -0.41
SCAMP4-208ENST00000489554 RASA1P20936 1047 aa12.52□□□□□ -0.41
SCAMP4-208ENST00000489554 ATP2B2Q01814 1243 aa12.52□□□□□ -0.41
SCAMP4-208ENST00000489554 GPR142Q7Z601 462 aa12.52□□□□□ -0.41
SCAMP4-208ENST00000489554 PLEKHH3Q7Z736 793 aa12.52□□□□□ -0.41
SCAMP4-208ENST00000489554 TRMT44Q8IYL2 757 aaKnown RBP12.52□□□□□ -0.41
SCAMP4-208ENST00000489554 ZNF444Q8N0Y2 327 aaPredicted RBP12.52□□□□□ -0.41
SCAMP4-208ENST00000489554 MB21D1Q8N884 522 aa12.52□□□□□ -0.41
SCAMP4-208ENST00000489554 UNC93B1Q9H1C4 597 aa12.52□□□□□ -0.41
SCAMP4-208ENST00000489554 GOPCQ9HD26 462 aa12.52□□□□□ -0.41
SCAMP4-208ENST00000489554 CENPFP49454 3210 aa12.52□□□□□ -0.41
SCAMP4-208ENST00000489554 MYH8P13535 1937 aa12.51□□□□□ -0.41
SCAMP4-208ENST00000489554 FLOT1O75955 427 aa12.51□□□□□ -0.41
SCAMP4-208ENST00000489554 RGS2P41220 211 aa12.51□□□□□ -0.41
SCAMP4-208ENST00000489554 MFAP1P55081 439 aaKnown RBP12.51□□□□□ -0.41
SCAMP4-208ENST00000489554 PDE4BQ07343 736 aa12.51□□□□□ -0.41
SCAMP4-208ENST00000489554 KIAA1755Q5JYT7 1200 aa12.51□□□□□ -0.41
SCAMP4-208ENST00000489554 MORN1Q5T089 497 aa12.51□□□□□ -0.41
SCAMP4-208ENST00000489554 CASC1Q6TDU7 716 aa12.51□□□□□ -0.41
SCAMP4-208ENST00000489554 SPICE1Q8N0Z3 855 aa12.51□□□□□ -0.41
SCAMP4-208ENST00000489554 STK11IPQ8N1F8 1099 aa12.51□□□□□ -0.41
SCAMP4-208ENST00000489554 U2AF1L4Q8WU68 220 aaKnown RBP12.51□□□□□ -0.41
SCAMP4-208ENST00000489554 RUFY2Q8WXA3 655 aa12.51□□□□□ -0.41
SCAMP4-208ENST00000489554 SHISA4Q96DD7 197 aa12.51□□□□□ -0.41
SCAMP4-208ENST00000489554 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.51□□□□□ -0.41
SCAMP4-208ENST00000489554 USP26Q9BXU7 913 aa12.51□□□□□ -0.41
SCAMP4-208ENST00000489554 BTBD7Q9P203 1132 aa12.51□□□□□ -0.41
SCAMP4-208ENST00000489554 NYAP2Q9P242 653 aa12.51□□□□□ -0.41
SCAMP4-208ENST00000489554 PDE4DIPQ5VU43 2346 aa12.51□□□□□ -0.41
SCAMP4-208ENST00000489554 LAMA4Q16363 1823 aa12.51□□□□□ -0.41
SCAMP4-208ENST00000489554 SGPL1O95470 568 aa12.5□□□□□ -0.41
SCAMP4-208ENST00000489554 HSPD1P10809 573 aaKnown RBP12.5□□□□□ -0.41
SCAMP4-208ENST00000489554 CYP2B6P20813 491 aa12.5□□□□□ -0.41
SCAMP4-208ENST00000489554 DSG3P32926 999 aa12.5□□□□□ -0.41
SCAMP4-208ENST00000489554 PPARAQ07869 468 aa12.5□□□□□ -0.41
SCAMP4-208ENST00000489554 USP6NLQ92738 828 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms