RNA–Protein interactions for RNA: ENST00000489196.1

CASD1-206, Transcript of CAS1 domain containing 1, humanhuman

TSL 3

Gene CASD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1-206ENST00000489196 GPATCH2Q9NW75 528 aa4.5□□□□□ -1.69
CASD1-206ENST00000489196 GRIN2BQ13224 1484 aa4.49□□□□□ -1.69
CASD1-206ENST00000489196 RAPGEF2Q9Y4G8 1499 aa4.49□□□□□ -1.69
CASD1-206ENST00000489196 ABCA5Q8WWZ7 1642 aa4.49□□□□□ -1.69
CASD1-206ENST00000489196 TPP2P29144 1249 aaPredicted RBP4.49□□□□□ -1.69
CASD1-206ENST00000489196 CCDC85BQ15834 202 aaPredicted RBP4.49□□□□□ -1.69
CASD1-206ENST00000489196 TMEM87BQ96K49 555 aa4.49□□□□□ -1.69
CASD1-206ENST00000489196 TJP2Q9UDY2 1190 aa4.49□□□□□ -1.69
CASD1-206ENST00000489196 PRXQ9BXM0 1461 aa4.49□□□□□ -1.69
CASD1-206ENST00000489196 LINC00310P59036 64 aa4.48□□□□□ -1.69
CASD1-206ENST00000489196 CARMIL1Q5VZK9 1371 aa4.48□□□□□ -1.69
CASD1-206ENST00000489196 LILRA2Q8N149 483 aa4.48□□□□□ -1.69
CASD1-206ENST00000489196 OXR1Q8N573 874 aa4.48□□□□□ -1.69
CASD1-206ENST00000489196 PDZD8Q8NEN9 1154 aa4.48□□□□□ -1.69
CASD1-206ENST00000489196 SYTL4Q96C24 671 aaPredicted RBP4.48□□□□□ -1.69
CASD1-206ENST00000489196 DPH2Q9BQC3 489 aaPredicted RBP4.48□□□□□ -1.69
CASD1-206ENST00000489196 DUSP15Q9H1R2 295 aaPredicted RBP4.48□□□□□ -1.69
CASD1-206ENST00000489196 MAGI1Q96QZ7 1491 aaPredicted RBP4.48□□□□□ -1.69
CASD1-206ENST00000489196 LDHBP07195 334 aaKnown RBP4.48□□□□□ -1.69
CASD1-206ENST00000489196 EIF4BP23588 611 aaKnown RBP4.48□□□□□ -1.69
CASD1-206ENST00000489196 SEPT6Q14141 434 aa4.48□□□□□ -1.69
CASD1-206ENST00000489196 GAB4Q2WGN9 574 aa4.48□□□□□ -1.69
CASD1-206ENST00000489196 DIEXFQ68CQ4 756 aaKnown RBP4.48□□□□□ -1.69
CASD1-206ENST00000489196 MCATQ8IVS2 390 aaKnown RBP4.48□□□□□ -1.69
CASD1-206ENST00000489196 DHX38Q92620 1227 aaKnown RBP4.48□□□□□ -1.69
CASD1-206ENST00000489196 RNF32Q9H0A6 362 aa4.48□□□□□ -1.69
CASD1-206ENST00000489196 MIR1-1HGQ9H1L0 117 aa4.48□□□□□ -1.69
CASD1-206ENST00000489196 SLC6A17Q9H1V8 727 aa4.48□□□□□ -1.69
CASD1-206ENST00000489196 DUSP13Q9UII6 198 aa4.48□□□□□ -1.69
CASD1-206ENST00000489196 KCNH3Q9ULD8 1083 aa4.48□□□□□ -1.69
CASD1-206ENST00000489196 CEP131Q9UPN4 1083 aa4.48□□□□□ -1.69
CASD1-206ENST00000489196 PCDHB5Q9Y5E4 795 aa4.48□□□□□ -1.69
CASD1-206ENST00000489196 PBRM1Q86U86 1689 aa4.48□□□□□ -1.69
CASD1-206ENST00000489196 FHAD1B1AJZ9 1412 aa4.47□□□□□ -1.69
CASD1-206ENST00000489196 TRHRP34981 398 aaPredicted RBP4.47□□□□□ -1.69
CASD1-206ENST00000489196 AGMOQ6ZNB7 445 aa4.47□□□□□ -1.69
CASD1-206ENST00000489196 IRF2BP1Q8IU81 584 aa4.47□□□□□ -1.69
CASD1-206ENST00000489196 Q96M66 194 aa4.47□□□□□ -1.69
CASD1-206ENST00000489196 RAD54L2Q9Y4B4 1467 aa4.47□□□□□ -1.69
CASD1-206ENST00000489196 WASH4PA8MWX3 477 aa4.47□□□□□ -1.69
CASD1-206ENST00000489196 GNA15P30679 374 aa4.47□□□□□ -1.69
CASD1-206ENST00000489196 EGR3Q06889 387 aa4.47□□□□□ -1.69
CASD1-206ENST00000489196 DNAJB8Q8NHS0 232 aa4.47□□□□□ -1.69
CASD1-206ENST00000489196 GPR62Q9BZJ7 368 aa4.47□□□□□ -1.69
CASD1-206ENST00000489196 IRF2BPLQ9H1B7 796 aa4.47□□□□□ -1.69
CASD1-206ENST00000489196 ADAM30Q9UKF2 790 aa4.47□□□□□ -1.69
CASD1-206ENST00000489196 FITM1A5D6W6 292 aa4.46□□□□□ -1.7
CASD1-206ENST00000489196 ZGLP1P0C6A0 271 aa4.46□□□□□ -1.7
CASD1-206ENST00000489196 TSNAXIP1Q2TAA8 658 aa4.46□□□□□ -1.7
CASD1-206ENST00000489196 TSPYL5Q86VY4 417 aaPredicted RBP4.46□□□□□ -1.7
CASD1-206ENST00000489196 C19orf44Q9H6X5 657 aa4.46□□□□□ -1.7
CASD1-206ENST00000489196 CWC22Q9HCG8 908 aaKnown RBP4.46□□□□□ -1.7
CASD1-206ENST00000489196 PEX10O60683 326 aa4.46□□□□□ -1.7
CASD1-206ENST00000489196 P4HBP07237 508 aaKnown RBP4.46□□□□□ -1.7
CASD1-206ENST00000489196 HOXA5P20719 270 aa4.46□□□□□ -1.7
CASD1-206ENST00000489196 LTKP29376 864 aa4.46□□□□□ -1.7
CASD1-206ENST00000489196 LIG3P49916 1009 aa4.46□□□□□ -1.7
CASD1-206ENST00000489196 NR0B2Q15466 257 aa4.46□□□□□ -1.7
CASD1-206ENST00000489196 SPPL2CQ8IUH8 684 aa4.46□□□□□ -1.7
CASD1-206ENST00000489196 CTTNBP2Q8WZ74 1663 aa4.45□□□□□ -1.7
CASD1-206ENST00000489196 EIF4G3O43432 1585 aaKnown RBP4.45□□□□□ -1.7
CASD1-206ENST00000489196 RUSC2Q8N2Y8 1516 aa4.45□□□□□ -1.7
CASD1-206ENST00000489196 SEMA7AO75326 666 aa4.45□□□□□ -1.7
CASD1-206ENST00000489196 RLBP1P12271 317 aa4.45□□□□□ -1.7
CASD1-206ENST00000489196 DLG4P78352 724 aa4.45□□□□□ -1.7
CASD1-206ENST00000489196 RPL6Q02878 288 aaKnown RBP4.45□□□□□ -1.7
CASD1-206ENST00000489196 MAP3K11Q16584 847 aa4.45□□□□□ -1.7
CASD1-206ENST00000489196 TMEM132EQ6IEE7 984 aa4.45□□□□□ -1.7
CASD1-206ENST00000489196 DTWD2Q8NBA8 298 aa4.45□□□□□ -1.7
CASD1-206ENST00000489196 BAHD1Q8TBE0 780 aaPredicted RBP4.45□□□□□ -1.7
CASD1-206ENST00000489196 ACSF2Q96CM8 615 aaPredicted RBP4.45□□□□□ -1.7
CASD1-206ENST00000489196 SP110Q9HB58 689 aa4.45□□□□□ -1.7
CASD1-206ENST00000489196 TDRD9Q8NDG6 1382 aaKnown RBP4.45□□□□□ -1.7
CASD1-206ENST00000489196 EFCAB5A4FU69 1503 aa4.45□□□□□ -1.7
CASD1-206ENST00000489196 RBAK-RBAKDNI3L0D1 243 aa4.44□□□□□ -1.7
CASD1-206ENST00000489196 RANGAP1P46060 587 aaPredicted RBP4.44□□□□□ -1.7
CASD1-206ENST00000489196 YARSP54577 528 aaKnown RBP4.44□□□□□ -1.7
CASD1-206ENST00000489196 CHRNEQ04844 493 aa4.44□□□□□ -1.7
CASD1-206ENST00000489196 SNX17Q15036 470 aa4.44□□□□□ -1.7
CASD1-206ENST00000489196 ZNF605Q86T29 641 aa4.44□□□□□ -1.7
CASD1-206ENST00000489196 CYB5D2Q8WUJ1 264 aa4.44□□□□□ -1.7
CASD1-206ENST00000489196 MCOLN1Q9GZU1 580 aa4.44□□□□□ -1.7
CASD1-206ENST00000489196 AK5Q9Y6K8 562 aa4.44□□□□□ -1.7
CASD1-206ENST00000489196 ADAMTS12P58397 1594 aa4.44□□□□□ -1.7
CASD1-206ENST00000489196 SYNJ2O15056 1496 aa4.44□□□□□ -1.7
CASD1-206ENST00000489196 PRPF40AO75400 957 aaKnown RBP4.44□□□□□ -1.7
CASD1-206ENST00000489196 PPP1R13LQ8WUF5 828 aa4.44□□□□□ -1.7
CASD1-206ENST00000489196 INTS4Q96HW7 963 aaKnown RBP4.44□□□□□ -1.7
CASD1-206ENST00000489196 PARD6AQ9NPB6 346 aa4.44□□□□□ -1.7
CASD1-206ENST00000489196 YBX2Q9Y2T7 364 aaKnown RBP4.44□□□□□ -1.7
CASD1-206ENST00000489196 PCDHA11Q9Y5I1 949 aa4.44□□□□□ -1.7
CASD1-206ENST00000489196 CEP162Q5TB80 1403 aa4.44□□□□□ -1.7
CASD1-206ENST00000489196 CLIP1P30622 1438 aa4.43□□□□□ -1.7
CASD1-206ENST00000489196 SYN1P17600 705 aa4.43□□□□□ -1.7
CASD1-206ENST00000489196 TFE3P19532 575 aaPredicted RBP4.43□□□□□ -1.7
CASD1-206ENST00000489196 DUSP4Q13115 394 aa4.43□□□□□ -1.7
CASD1-206ENST00000489196 RNF141Q8WVD5 230 aa4.43□□□□□ -1.7
CASD1-206ENST00000489196 JARID2Q92833 1246 aaPredicted RBP4.43□□□□□ -1.7
CASD1-206ENST00000489196 ZCCHC4Q9H5U6 513 aa4.43□□□□□ -1.7
CASD1-206ENST00000489196 CNOT6Q9ULM6 557 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms