RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 LHX8Q68G74 356 aa14.71□□□□□ -0.05
VPS16-208ENST00000487461 TMEM179Q6ZVK1 233 aa14.71□□□□□ -0.05
VPS16-208ENST00000487461 APBA2Q99767 749 aa14.71□□□□□ -0.05
VPS16-208ENST00000487461 PUS7LQ9H0K6 701 aaKnown RBP14.71□□□□□ -0.05
VPS16-208ENST00000487461 C11orf49Q9H6J7 331 aa14.71□□□□□ -0.05
VPS16-208ENST00000487461 HOXC10Q9NYD6 342 aa14.71□□□□□ -0.05
VPS16-208ENST00000487461 STAP2Q9UGK3 403 aa14.71□□□□□ -0.05
VPS16-208ENST00000487461 DDX60LQ5H9U9 1706 aaKnown RBP14.7□□□□□ -0.06
VPS16-208ENST00000487461 CLEC10AQ8IUN9 316 aa14.7□□□□□ -0.06
VPS16-208ENST00000487461 NPLOC4Q8TAT6 608 aa14.7□□□□□ -0.06
VPS16-208ENST00000487461 SLC4A4Q9Y6R1 1079 aa14.7□□□□□ -0.06
VPS16-208ENST00000487461 GRB14Q14449 540 aa14.69□□□□□ -0.06
VPS16-208ENST00000487461 CTR9Q6PD62 1173 aa14.69□□□□□ -0.06
VPS16-208ENST00000487461 C7orf61Q8IZ16 206 aa14.69□□□□□ -0.06
VPS16-208ENST00000487461 CCDC17Q96LX7 622 aa14.69□□□□□ -0.06
VPS16-208ENST00000487461 MOV10L1Q9BXT6 1211 aaKnown RBP14.69□□□□□ -0.06
VPS16-208ENST00000487461 TANGO6Q9C0B7 1094 aa14.69□□□□□ -0.06
VPS16-208ENST00000487461 DCTPP1Q9H773 170 aa14.69□□□□□ -0.06
VPS16-208ENST00000487461 TMX2Q9Y320 296 aa14.69□□□□□ -0.06
VPS16-208ENST00000487461 NAV1Q8NEY1 1877 aa14.69□□□□□ -0.06
VPS16-208ENST00000487461 HOXC6P09630 235 aa14.68□□□□□ -0.06
VPS16-208ENST00000487461 DSG3P32926 999 aa14.68□□□□□ -0.06
VPS16-208ENST00000487461 ATP2B2Q01814 1243 aa14.68□□□□□ -0.06
VPS16-208ENST00000487461 ICA1Q05084 483 aa14.68□□□□□ -0.06
VPS16-208ENST00000487461 MFSD14CQ5VZR4 134 aa14.68□□□□□ -0.06
VPS16-208ENST00000487461 ZSCAN25Q6NSZ9 544 aa14.68□□□□□ -0.06
VPS16-208ENST00000487461 C16orf86Q6ZW13 317 aa14.68□□□□□ -0.06
VPS16-208ENST00000487461 SPICE1Q8N0Z3 855 aa14.68□□□□□ -0.06
VPS16-208ENST00000487461 ARHGEF10LQ9HCE6 1279 aa14.68□□□□□ -0.06
VPS16-208ENST00000487461 ECHDC1Q9NTX5 307 aa14.68□□□□□ -0.06
VPS16-208ENST00000487461 ZMYND8Q9ULU4 1186 aaPredicted RBP14.68□□□□□ -0.06
VPS16-208ENST00000487461 IVNS1ABPQ9Y6Y0 642 aa14.68□□□□□ -0.06
VPS16-208ENST00000487461 PFASO15067 1338 aa14.67□□□□□ -0.06
VPS16-208ENST00000487461 RANBP2P49792 3224 aaKnown RBP14.67□□□□□ -0.06
VPS16-208ENST00000487461 IGHA2P01877 340 aa14.67□□□□□ -0.06
VPS16-208ENST00000487461 COL6A1P12109 1028 aa14.67□□□□□ -0.06
VPS16-208ENST00000487461 AMOTL1Q8IY63 956 aa14.67□□□□□ -0.06
VPS16-208ENST00000487461 LPAR1Q92633 364 aa14.67□□□□□ -0.06
VPS16-208ENST00000487461 DDRGK1Q96HY6 314 aa14.67□□□□□ -0.06
VPS16-208ENST00000487461 STRBPQ96SI9 672 aaKnown RBP14.67□□□□□ -0.06
VPS16-208ENST00000487461 SPATC1LQ9H0A9 340 aa14.67□□□□□ -0.06
VPS16-208ENST00000487461 VCPKMTQ9H867 229 aa14.67□□□□□ -0.06
VPS16-208ENST00000487461 STRNO43815 780 aa14.66□□□□□ -0.06
VPS16-208ENST00000487461 COBLO75128 1261 aa14.66□□□□□ -0.06
VPS16-208ENST00000487461 FLOT1O75955 427 aa14.66□□□□□ -0.06
VPS16-208ENST00000487461 EEF2P13639 858 aaKnown RBP14.66□□□□□ -0.06
VPS16-208ENST00000487461 SYN1P17600 705 aa14.66□□□□□ -0.06
VPS16-208ENST00000487461 ERCC3P19447 782 aa14.66□□□□□ -0.06
VPS16-208ENST00000487461 CYP2C19P33261 490 aa14.66□□□□□ -0.06
VPS16-208ENST00000487461 TSHZ3Q63HK5 1081 aa14.66□□□□□ -0.06
VPS16-208ENST00000487461 DPP9Q86TI2 863 aa14.66□□□□□ -0.06
VPS16-208ENST00000487461 MB21D1Q8N884 522 aa14.66□□□□□ -0.06
VPS16-208ENST00000487461 KBTBD3Q8NAB2 608 aa14.66□□□□□ -0.06
VPS16-208ENST00000487461 SHCBP1Q8NEM2 672 aa14.66□□□□□ -0.06
VPS16-208ENST00000487461 TRPV1Q8NER1 839 aa14.66□□□□□ -0.06
VPS16-208ENST00000487461 OSBP2Q969R2 916 aa14.66□□□□□ -0.06
VPS16-208ENST00000487461 ATG4CQ96DT6 458 aa14.66□□□□□ -0.06
VPS16-208ENST00000487461 GDF15Q99988 308 aa14.66□□□□□ -0.06
VPS16-208ENST00000487461 ALPK3Q96L96 1907 aa14.66□□□□□ -0.06
VPS16-208ENST00000487461 BAZ2AQ9UIF9 1905 aaKnown RBP14.65□□□□□ -0.06
VPS16-208ENST00000487461 A0A1W2PPC1 479 aa14.65□□□□□ -0.06
VPS16-208ENST00000487461 GSG1L2A8MUP6 293 aa14.65□□□□□ -0.06
VPS16-208ENST00000487461 ADORA2AP29274 412 aa14.65□□□□□ -0.06
VPS16-208ENST00000487461 CNGA1P29973 690 aa14.65□□□□□ -0.06
VPS16-208ENST00000487461 PLS1Q14651 629 aa14.65□□□□□ -0.06
VPS16-208ENST00000487461 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.65□□□□□ -0.06
VPS16-208ENST00000487461 SH2D4AQ9H788 454 aa14.65□□□□□ -0.06
VPS16-208ENST00000487461 KANSL2Q9H9L4 492 aa14.65□□□□□ -0.06
VPS16-208ENST00000487461 DDX20Q9UHI6 824 aaKnown RBP14.65□□□□□ -0.06
VPS16-208ENST00000487461 SOX1O00570 391 aaPredicted RBP14.64□□□□□ -0.07
VPS16-208ENST00000487461 WDR46O15213 610 aaKnown RBP14.64□□□□□ -0.07
VPS16-208ENST00000487461 RNF113AO15541 343 aaKnown RBP14.64□□□□□ -0.07
VPS16-208ENST00000487461 BMP8BP34820 402 aa14.64□□□□□ -0.07
VPS16-208ENST00000487461 LRRC26Q2I0M4 334 aa14.64□□□□□ -0.07
VPS16-208ENST00000487461 SBK1Q52WX2 424 aa14.64□□□□□ -0.07
VPS16-208ENST00000487461 OLFML2BQ68BL8 750 aa14.64□□□□□ -0.07
VPS16-208ENST00000487461 SAMD1Q6SPF0 538 aaPredicted RBP14.64□□□□□ -0.07
VPS16-208ENST00000487461 NCAPG2Q86XI2 1143 aa14.64□□□□□ -0.07
VPS16-208ENST00000487461 STK11IPQ8N1F8 1099 aa14.64□□□□□ -0.07
VPS16-208ENST00000487461 FBXO28Q9NVF7 368 aa14.64□□□□□ -0.07
VPS16-208ENST00000487461 ADAMTS5Q9UNA0 930 aa14.64□□□□□ -0.07
VPS16-208ENST00000487461 RLFQ13129 1914 aa14.64□□□□□ -0.07
VPS16-208ENST00000487461 SZT2Q5T011 3432 aa14.63□□□□□ -0.07
VPS16-208ENST00000487461 TMEM132BQ14DG7 1078 aa14.63□□□□□ -0.07
VPS16-208ENST00000487461 GIMAP6Q6P9H5 292 aa14.63□□□□□ -0.07
VPS16-208ENST00000487461 APPBP2Q92624 585 aa14.63□□□□□ -0.07
VPS16-208ENST00000487461 MROH8Q9H579 483 aa14.63□□□□□ -0.07
VPS16-208ENST00000487461 ARPP21Q9UBL0 812 aaPredicted RBP14.63□□□□□ -0.07
VPS16-208ENST00000487461 PCDHB15Q9Y5E8 787 aa14.63□□□□□ -0.07
VPS16-208ENST00000487461 MINDY4BA8MYZ0 360 aa14.62□□□□□ -0.07
VPS16-208ENST00000487461 CYBAP13498 195 aa14.62□□□□□ -0.07
VPS16-208ENST00000487461 RASA1P20936 1047 aa14.62□□□□□ -0.07
VPS16-208ENST00000487461 MAGEA10P43363 369 aaPredicted RBP14.62□□□□□ -0.07
VPS16-208ENST00000487461 PRAMEF19Q5SWL8 479 aa14.62□□□□□ -0.07
VPS16-208ENST00000487461 ABRAQ8N0Z2 381 aa14.62□□□□□ -0.07
VPS16-208ENST00000487461 GPATCH3Q96I76 525 aa14.62□□□□□ -0.07
VPS16-208ENST00000487461 LRCH3Q96II8 777 aa14.62□□□□□ -0.07
VPS16-208ENST00000487461 SENP6Q9GZR1 1112 aaPredicted RBP14.62□□□□□ -0.07
VPS16-208ENST00000487461 M0R2C6 588 aa14.61□□□□□ -0.07
VPS16-208ENST00000487461 GPAA1O43292 621 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms