RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 EEF2P13639 858 aaKnown RBP18.95■□□□□ 0.62
GABPA-203ENST00000487266 ERVK-9P63128 1117 aa18.95■□□□□ 0.62
GABPA-203ENST00000487266 ERVK-24P63145 666 aa18.95■□□□□ 0.62
GABPA-203ENST00000487266 VPS53Q5VIR6 699 aa18.95■□□□□ 0.62
GABPA-203ENST00000487266 GPRC5AQ8NFJ5 357 aa18.95■□□□□ 0.62
GABPA-203ENST00000487266 TANGO6Q9C0B7 1094 aa18.95■□□□□ 0.62
GABPA-203ENST00000487266 PDE4DIPQ5VU43 2346 aa18.95■□□□□ 0.62
GABPA-203ENST00000487266 TRIM6-TRIM34B2RNG4 842 aa18.94■□□□□ 0.62
GABPA-203ENST00000487266 SLAIN1Q8ND83 568 aa18.94■□□□□ 0.62
GABPA-203ENST00000487266 TMEM106CQ9BVX2 250 aa18.94■□□□□ 0.62
GABPA-203ENST00000487266 NAPBQ9H115 298 aa18.94■□□□□ 0.62
GABPA-203ENST00000487266 ARHGEF10LQ9HCE6 1279 aa18.94■□□□□ 0.62
GABPA-203ENST00000487266 BTBD7Q9P203 1132 aa18.94■□□□□ 0.62
GABPA-203ENST00000487266 BIN2Q9UBW5 565 aaPredicted RBP18.94■□□□□ 0.62
GABPA-203ENST00000487266 COL11A1P12107 1806 aaPredicted RBP18.94■□□□□ 0.62
GABPA-203ENST00000487266 INHAP05111 366 aa18.93■□□□□ 0.62
GABPA-203ENST00000487266 NMIQ13287 307 aaPredicted RBP18.93■□□□□ 0.62
GABPA-203ENST00000487266 RILPL2Q969X0 211 aa18.93■□□□□ 0.62
GABPA-203ENST00000487266 VCPKMTQ9H867 229 aa18.93■□□□□ 0.62
GABPA-203ENST00000487266 MKNK2Q9HBH9 465 aa18.93■□□□□ 0.62
GABPA-203ENST00000487266 GJD2Q9UKL4 321 aa18.93■□□□□ 0.62
GABPA-203ENST00000487266 TMX2Q9Y320 296 aa18.93■□□□□ 0.62
GABPA-203ENST00000487266 PPARAQ07869 468 aa18.92■□□□□ 0.62
GABPA-203ENST00000487266 IRF5Q13568 498 aa18.92■□□□□ 0.62
GABPA-203ENST00000487266 SAMD1Q6SPF0 538 aaPredicted RBP18.92■□□□□ 0.62
GABPA-203ENST00000487266 ZNF589Q86UQ0 364 aaPredicted RBP18.92■□□□□ 0.62
GABPA-203ENST00000487266 SHISA4Q96DD7 197 aa18.92■□□□□ 0.62
GABPA-203ENST00000487266 NACAP1Q9BZK3 213 aa18.92■□□□□ 0.62
GABPA-203ENST00000487266 UNC93B1Q9H1C4 597 aa18.92■□□□□ 0.62
GABPA-203ENST00000487266 KANSL2Q9H9L4 492 aa18.92■□□□□ 0.62
GABPA-203ENST00000487266 RAD21O60216 631 aa18.91■□□□□ 0.62
GABPA-203ENST00000487266 CCL5P13501 91 aa18.91■□□□□ 0.62
GABPA-203ENST00000487266 CYP2B6P20813 491 aa18.91■□□□□ 0.62
GABPA-203ENST00000487266 PDE4AP27815 886 aa18.91■□□□□ 0.62
GABPA-203ENST00000487266 CTDSPL2Q05D32 466 aa18.91■□□□□ 0.62
GABPA-203ENST00000487266 TRIM32Q13049 653 aa18.91■□□□□ 0.62
GABPA-203ENST00000487266 GPR142Q7Z601 462 aa18.91■□□□□ 0.62
GABPA-203ENST00000487266 GTF3C2Q8WUA4 911 aaPredicted RBP18.91■□□□□ 0.62
GABPA-203ENST00000487266 RABGAP1Q9Y3P9 1069 aa18.91■□□□□ 0.62
GABPA-203ENST00000487266 FAM47AQ5JRC9 791 aa18.9■□□□□ 0.62
GABPA-203ENST00000487266 LBX2Q6XYB7 198 aa18.9■□□□□ 0.62
GABPA-203ENST00000487266 PXYLP1Q8TE99 480 aa18.9■□□□□ 0.62
GABPA-203ENST00000487266 LPAR1Q92633 364 aa18.9■□□□□ 0.62
GABPA-203ENST00000487266 RNF208Q9H0X6 261 aa18.9■□□□□ 0.62
GABPA-203ENST00000487266 OSBPL3Q9H4L5 887 aa18.9■□□□□ 0.62
GABPA-203ENST00000487266 SH2D4AQ9H788 454 aa18.9■□□□□ 0.62
GABPA-203ENST00000487266 INCENPQ9NQS7 918 aa18.9■□□□□ 0.62
GABPA-203ENST00000487266 HELLSQ9NRZ9 838 aa18.9■□□□□ 0.62
GABPA-203ENST00000487266 TACC3Q9Y6A5 838 aa18.9■□□□□ 0.62
GABPA-203ENST00000487266 IGKV6D-41A0A0C4DH26 115 aa18.89■□□□□ 0.61
GABPA-203ENST00000487266 FLOT1O75955 427 aa18.89■□□□□ 0.61
GABPA-203ENST00000487266 MAPK4P31152 587 aa18.89■□□□□ 0.61
GABPA-203ENST00000487266 UBXN2AP68543 259 aa18.89■□□□□ 0.61
GABPA-203ENST00000487266 WDR78Q5VTH9 848 aa18.89■□□□□ 0.61
GABPA-203ENST00000487266 TRIB2Q92519 343 aa18.89■□□□□ 0.61
GABPA-203ENST00000487266 ATG4CQ96DT6 458 aa18.89■□□□□ 0.61
GABPA-203ENST00000487266 NUP88Q99567 741 aaPredicted RBP18.89■□□□□ 0.61
GABPA-203ENST00000487266 FBXO28Q9NVF7 368 aa18.89■□□□□ 0.61
GABPA-203ENST00000487266 WDR46O15213 610 aaKnown RBP18.88■□□□□ 0.61
GABPA-203ENST00000487266 COG2Q14746 738 aa18.88■□□□□ 0.61
GABPA-203ENST00000487266 MCMDC2Q4G0Z9 681 aa18.88■□□□□ 0.61
GABPA-203ENST00000487266 CCAR1Q8IX12 1150 aaKnown RBP18.88■□□□□ 0.61
GABPA-203ENST00000487266 CEP95Q96GE4 821 aa18.88■□□□□ 0.61
GABPA-203ENST00000487266 PLIN4Q96Q06 1357 aa18.88■□□□□ 0.61
GABPA-203ENST00000487266 SDSP20132 328 aa18.87■□□□□ 0.61
GABPA-203ENST00000487266 CCL14Q16627 93 aa18.87■□□□□ 0.61
GABPA-203ENST00000487266 MORN1Q5T089 497 aa18.87■□□□□ 0.61
GABPA-203ENST00000487266 FAM83BQ5T0W9 1011 aa18.87■□□□□ 0.61
GABPA-203ENST00000487266 PLEKHH3Q7Z736 793 aa18.87■□□□□ 0.61
GABPA-203ENST00000487266 ZNF444Q8N0Y2 327 aaPredicted RBP18.87■□□□□ 0.61
GABPA-203ENST00000487266 LRRC47Q8N1G4 583 aaKnown RBP18.87■□□□□ 0.61
GABPA-203ENST00000487266 SOCS4Q8WXH5 440 aa18.87■□□□□ 0.61
GABPA-203ENST00000487266 NUDT12Q9BQG2 462 aa18.87■□□□□ 0.61
GABPA-203ENST00000487266 GOPCQ9HD26 462 aa18.87■□□□□ 0.61
GABPA-203ENST00000487266 LAMA4Q16363 1823 aa18.86■□□□□ 0.61
GABPA-203ENST00000487266 CCDC171Q6TFL3 1326 aa18.86■□□□□ 0.61
GABPA-203ENST00000487266 NDUFB10O96000 172 aa18.86■□□□□ 0.61
GABPA-203ENST00000487266 HMGCRP04035 888 aa18.86■□□□□ 0.61
GABPA-203ENST00000487266 DSG3P32926 999 aa18.86■□□□□ 0.61
GABPA-203ENST00000487266 PDE4BQ07343 736 aa18.86■□□□□ 0.61
GABPA-203ENST00000487266 USP6NLQ92738 828 aa18.86■□□□□ 0.61
GABPA-203ENST00000487266 MOV10L1Q9BXT6 1211 aaKnown RBP18.86■□□□□ 0.61
GABPA-203ENST00000487266 CWC22Q9HCG8 908 aaKnown RBP18.86■□□□□ 0.61
GABPA-203ENST00000487266 CLIP2Q9UDT6 1046 aa18.86■□□□□ 0.61
GABPA-203ENST00000487266 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.86■□□□□ 0.61
GABPA-203ENST00000487266 TSPY3P0CV98 308 aa18.85■□□□□ 0.61
GABPA-203ENST00000487266 TSPY8P0CW00 308 aa18.85■□□□□ 0.61
GABPA-203ENST00000487266 HSPD1P10809 573 aaKnown RBP18.85■□□□□ 0.61
GABPA-203ENST00000487266 GSPT1P15170 499 aaKnown RBP18.85■□□□□ 0.61
GABPA-203ENST00000487266 CCNA1P78396 465 aa18.85■□□□□ 0.61
GABPA-203ENST00000487266 TFAP4Q01664 338 aa18.85■□□□□ 0.61
GABPA-203ENST00000487266 PLS1Q14651 629 aa18.85■□□□□ 0.61
GABPA-203ENST00000487266 CWC27Q6UX04 472 aaKnown RBP18.85■□□□□ 0.61
GABPA-203ENST00000487266 CHMP4CQ96CF2 233 aa18.85■□□□□ 0.61
GABPA-203ENST00000487266 SPATC1LQ9H0A9 340 aa18.85■□□□□ 0.61
GABPA-203ENST00000487266 ZNF287Q9HBT7 754 aa18.85■□□□□ 0.61
GABPA-203ENST00000487266 MTMR4Q9NYA4 1195 aa18.85■□□□□ 0.61
GABPA-203ENST00000487266 NYAP2Q9P242 653 aa18.85■□□□□ 0.61
GABPA-203ENST00000487266 ZNF236Q9UL36 1845 aa18.85■□□□□ 0.61
GABPA-203ENST00000487266 F5H6K3 240 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms